CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35100677|35101006
Strand -
CircType exon
Host Gene ENSG00000165283.14;
Algorism CIRI2;
Sequence GCGCTGACATACTGCTCGGCCACAGTCAGTGAAGCTGCTGCATCTCCATTCTGTGATCACAGGGGGATAAAAATCAGAGATCACCGATACGGAGAAGAAGGGGGGGATGGGGAATGAAGAAAGCAGTTCACAATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCCTCAAGCGTAGATAAGAGAACCCCTTCCACTGTCAATTCCTGTCCCCATTCCCACCCAGGGGCCTCTCACATGTTGTGTCAGAGCTGCAGCCAGGATTCGAATAGCTTCAGCTTTAGCCTTGGCCTTCGCCAGAACTGCACTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35100677|35101006 hsa-miR-107 0 0 1
chr9:35100677|35101006 hsa-miR-148a-5p 0 0 1
chr9:35100677|35101006 hsa-miR-148a-3p 0 0 1
chr9:35100677|35101006 hsa-miR-152-5p 0 0 1
chr9:35100677|35101006 hsa-miR-152-3p 0 0 1
chr9:35100677|35101006 hsa-miR-320a-5p 0 0 1
chr9:35100677|35101006 hsa-miR-320a-3p 0 0 1
chr9:35100677|35101006 hsa-miR-148b-5p 0 0 1
chr9:35100677|35101006 hsa-miR-148b-3p 0 0 1
chr9:35100677|35101006 hsa-miR-604 0 0 1
chr9:35100677|35101006 hsa-miR-620 0 0 1
chr9:35100677|35101006 hsa-miR-646 0 0 1
chr9:35100677|35101006 hsa-miR-647 0 1 1
chr9:35100677|35101006 hsa-miR-1301-5p 0 0 1
chr9:35100677|35101006 hsa-miR-1301-3p 0 0 1
chr9:35100677|35101006 hsa-miR-1298-5p 0 0 1
chr9:35100677|35101006 hsa-miR-1298-3p 0 0 1
chr9:35100677|35101006 hsa-miR-760 1 0 1
chr9:35100677|35101006 hsa-miR-942-5p 0 0 1
chr9:35100677|35101006 hsa-miR-942-3p 0 0 1
chr9:35100677|35101006 hsa-miR-943 0 1 1
chr9:35100677|35101006 hsa-miR-663b 0 0 1
chr9:35100677|35101006 hsa-miR-1293 0 0 1
chr9:35100677|35101006 hsa-miR-1248 0 0 1
chr9:35100677|35101006 hsa-miR-1267 0 0 1
chr9:35100677|35101006 hsa-miR-1270 0 0 1
chr9:35100677|35101006 hsa-miR-1825 0 0 1
chr9:35100677|35101006 hsa-miR-127-5p 0 0 1
chr9:35100677|35101006 hsa-miR-1224-5p 0 0 1
chr9:35100677|35101006 hsa-miR-1184 0 0 1
chr9:35100677|35101006 hsa-miR-331-3p 0 0 1
chr9:35100677|35101006 hsa-miR-320b 0 0 1
chr9:35100677|35101006 hsa-miR-320c 0 0 1
chr9:35100677|35101006 hsa-miR-320d 0 0 1
chr9:35100677|35101006 hsa-miR-103 0 0 1
chr9:35100677|35101006 hsa-miR-206 1 0 0
chr9:35100677|35101006 hsa-miR-637 1 0 0
chr9:35100677|35101006 hsa-miR-762 1 0 0
chr9:35100677|35101006 hsa-miR-1268a 1 0 0
chr9:35100677|35101006 hsa-miR-1538 1 0 0
chr9:35100677|35101006 hsa-miR-718 0 1 0
chr9:35100677|35101006 hsa-miR-3122 1 0 0
chr9:35100677|35101006 hsa-miR-3135a 1 0 0
chr9:35100677|35101006 hsa-miR-3137 1 0 0
chr9:35100677|35101006 hsa-miR-3138 1 0 0
chr9:35100677|35101006 hsa-miR-3175 1 0 0
chr9:35100677|35101006 hsa-miR-4296 0 1 0
chr9:35100677|35101006 hsa-miR-4298 1 0 0
chr9:35100677|35101006 hsa-miR-4322 0 1 0
chr9:35100677|35101006 hsa-miR-4265 0 1 0
chr9:35100677|35101006 hsa-miR-4270 1 0 0
chr9:35100677|35101006 hsa-miR-4281 1 0 0
chr9:35100677|35101006 hsa-miR-4277 0 1 0
chr9:35100677|35101006 hsa-miR-4280 0 1 0
chr9:35100677|35101006 hsa-miR-3945 1 0 0
chr9:35100677|35101006 hsa-miR-1268b 1 0 0
chr9:35100677|35101006 hsa-miR-4420 0 1 0
chr9:35100677|35101006 hsa-miR-4494 1 1 0
chr9:35100677|35101006 hsa-miR-2392 1 0 0
chr9:35100677|35101006 hsa-miR-4507 1 0 0
chr9:35100677|35101006 hsa-miR-4651 1 0 0
chr9:35100677|35101006 hsa-miR-4654 1 0 0
chr9:35100677|35101006 hsa-miR-4660 1 1 0
chr9:35100677|35101006 hsa-miR-4688 1 0 0
chr9:35100677|35101006 hsa-miR-4721 1 0 0
chr9:35100677|35101006 hsa-miR-5090 1 0 0
chr9:35100677|35101006 hsa-miR-5191 1 0 0
chr9:35100677|35101006 hsa-miR-5698 1 0 0
chr9:35100677|35101006 hsa-miR-5787 1 0 0
chr9:35100677|35101006 hsa-miR-6081 1 0 0
chr9:35100677|35101006 hsa-miR-6127 1 0 0
chr9:35100677|35101006 hsa-miR-7704 1 0 0
chr9:35100677|35101006 hsa-miR-8089 1 1 0
chr9:35100677|35101006 hsa-miR-12128 1 0 0
chr9:35100677|35101006 hsa-miR-143-5p 0 1 0
chr9:35100677|35101006 hsa-miR-4433b-3p 1 0 0
chr9:35100677|35101006 hsa-miR-4433a-3p 1 0 0
chr9:35100677|35101006 hsa-miR-671-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6861-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6857-5p 1 1 0
chr9:35100677|35101006 hsa-miR-6728-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6833-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1236-5p 1 0 0
chr9:35100677|35101006 hsa-miR-5187-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1227-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6089 1 0 0
chr9:35100677|35101006 hsa-miR-6807-5p 0 1 0
chr9:35100677|35101006 hsa-miR-3192-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6757-5p 1 0 0
chr9:35100677|35101006 hsa-miR-7847-3p 1 0 0
chr9:35100677|35101006 hsa-miR-4753-5p 0 1 0
chr9:35100677|35101006 hsa-miR-7160-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6890-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6741-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6727-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6721-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6776-5p 1 1 0
chr9:35100677|35101006 hsa-miR-7845-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6832-3p 1 0 0
chr9:35100677|35101006 hsa-miR-7108-5p 1 1 0
chr9:35100677|35101006 hsa-miR-6716-5p 1 1 0
chr9:35100677|35101006 hsa-miR-6871-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1292-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6748-5p 1 1 0
chr9:35100677|35101006 hsa-miR-486-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6782-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6810-5p 1 1 0
chr9:35100677|35101006 hsa-miR-5008-5p 1 1 0
chr9:35100677|35101006 hsa-miR-5006-5p 1 0 0
chr9:35100677|35101006 hsa-miR-7109-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1226-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1247-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1229-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4640-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6753-5p 1 0 0
chr9:35100677|35101006 hsa-miR-5001-3p 1 0 0
chr9:35100677|35101006 hsa-miR-1908-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1228-5p 1 0 0
chr9:35100677|35101006 hsa-miR-92b-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4667-3p 1 0 0
chr9:35100677|35101006 hsa-miR-149-3p 1 0 0
chr9:35100677|35101006 hsa-miR-146b-3p 0 1 0
chr9:35100677|35101006 hsa-miR-3189-3p 1 0 0
chr9:35100677|35101006 hsa-miR-7112-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6870-3p 0 1 0
chr9:35100677|35101006 hsa-miR-3191-3p 1 0 0
chr9:35100677|35101006 hsa-miR-1237-3p 1 0 0
chr9:35100677|35101006 hsa-miR-4652-5p 1 0 0
chr9:35100677|35101006 hsa-miR-660-3p 0 1 0
chr9:35100677|35101006 hsa-miR-6785-3p 1 0 0
chr9:35100677|35101006 hsa-miR-597-3p 1 1 0
chr9:35100677|35101006 hsa-miR-598-5p 0 1 0
chr9:35100677|35101006 hsa-miR-6837-3p 0 1 0
chr9:35100677|35101006 hsa-miR-3160-5p 0 1 0
chr9:35100677|35101006 hsa-miR-6886-3p 1 0 0
chr9:35100677|35101006 hsa-miR-5088-3p 1 1 0
chr9:35100677|35101006 hsa-miR-483-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6795-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6794-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6880-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6883-3p 0 1 0
chr9:35100677|35101006 hsa-miR-6851-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6798-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6729-3p 1 1 0
chr9:35100677|35101006 hsa-miR-6731-3p 1 0 0
chr9:35100677|35101006 hsa-miR-10400-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1233-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4763-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6769b-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6778-5p 1 0 0
chr9:35100677|35101006 hsa-miR-5001-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6743-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6756-5p 1 1 0
chr9:35100677|35101006 hsa-miR-6769a-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6819-5p 1 0 0
chr9:35100677|35101006 hsa-miR-10401-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6763-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6779-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6780a-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6797-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6875-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6879-5p 1 0 0
chr9:35100677|35101006 hsa-miR-7111-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4728-5p 1 0 0
chr9:35100677|35101006 hsa-miR-5196-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6780b-5p 1 0 0
chr9:35100677|35101006 hsa-miR-328-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4685-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4725-3p 1 0 0
chr9:35100677|35101006 hsa-miR-4745-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4749-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6729-5p 1 0 0
chr9:35100677|35101006 hsa-miR-675-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6794-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6795-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6846-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6848-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6887-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4436b-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6885-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4758-5p 1 0 0
chr9:35100677|35101006 hsa-miR-4769-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6511a-5p 1 0 0
chr9:35100677|35101006 hsa-miR-1914-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6791-3p 1 0 0
chr9:35100677|35101006 hsa-miR-4700-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6766-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6849-5p 1 0 0
chr9:35100677|35101006 hsa-miR-6791-5p 1 1 0
chr9:35100677|35101006 hsa-miR-6756-3p 1 1 0
chr9:35100677|35101006 hsa-miR-6810-3p 1 0 0
chr9:35100677|35101006 hsa-miR-483-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6891-3p 1 1 0
chr9:35100677|35101006 hsa-miR-3085-3p 1 0 0
chr9:35100677|35101006 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:35100677|35101006
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MTYCSATVSEAAASPFCDHRGIKIRDHRYGEEGGDGE
Nucleotide Sequence CTGACATACTGCTCGGCCACAGTCAGTGAAGCTGCTGCATCTCCATTCTGTGATCACAGGGGGATAAAAATCAGAGATCACCGATACGGAGAAGAAGGGGGGGATGGGGAATGA
CircID chr9:35100677|35101006
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MLCQSCSQDSNSFSFSLGLRQNCTG
Nucleotide Sequence ATGTTGTGTCAGAGCTGCAGCCAGGATTCGAATAGCTTCAGCTTTAGCCTTGGCCTTCGCCAGAACTGCACTGGC
CircID chr9:35100677|35101006
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MSIPVPIPTQGPLTCCVRAAARIRIASALALAFARTAL
Nucleotide Sequence CTGTCAATTCCTGTCCCCATTCCCACCCAGGGGCCTCTCACATGTTGTGTCAGAGCTGCAGCCAGGATTCGAATAGCTTCAGCTTTAGCCTTGGCCTTCGCCAGAACTGCACTG
CircID chr9:35100677|35101006
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MKKAVHNKKDHVIWLNRAHRGGTLLKRR
Nucleotide Sequence ATGAAGAAAGCAGTTCACAATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCCTCAAGCGTAGATAA
CircID chr9:35100677|35101006
ORF Type ORF5
Protein Length 43
Nucleotide Length 132
Protein Sequence MAKAKAKAEAIRILAAALTQHVRGPWVGMGTGIDSGRGSLIYA
Nucleotide Sequence CTGGCGAAGGCCAAGGCTAAAGCTGAAGCTATTCGAATCCTGGCTGCAGCTCTGACACAACATGTGAGAGGCCCCTGGGTGGGAATGGGGACAGGAATTGACAGTGGAAGGGGTTCTCTTATCTACGCTTGA
CircID chr9:35100677|35101006
ORF Type ORF6
Protein Length 42
Nucleotide Length 126
Protein Sequence MLSSFPIPPFFSVSVISDFYPPVITEWRCSSFTDCGRAVCQR
Nucleotide Sequence CTGCTTTCTTCATTCCCCATCCCCCCCTTCTTCTCCGTATCGGTGATCTCTGATTTTTATCCCCCTGTGATCACAGAATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGC
CircID chr9:35100677|35101006
ORF Type ORF7
Protein Length 46
Nucleotide Length 141
Protein Sequence MTVEGVLLSTLEESSASVGSVEPDYMVLFIVNCFLHSPSPPSSPYR
Nucleotide Sequence TTGACAGTGGAAGGGGTTCTCTTATCTACGCTTGAGGAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATTGTGAACTGCTTTCTTCATTCCCCATCCCCCCCTTCTTCTCCGTATCGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab