CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35685280|35685517
Strand -
CircType exon
Host Gene ENSG00000198467.12;
Algorism CIRI2;
Sequence CTCAGCCCTCTCCTCCGAGCGCTCCAGCTCTCCTTCCAGGATCACCAGCTTCCTGGCCACCTGTGGGGAGTGAGAAAGAGAGGGTAGATCAGTGGAGAAGGACTGGGCATGTTGCAGGCTGGGCAGCGAGCAGGCAGAGGGGCAAGGCTGTCACCTCTTCATATTTGCGGTCTGAATCCTCAGCGATGTGCTTGGCCTCCTTCAGCTGCATCTCCTGCAGTTCCATCTTCTCCTCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35685280|35685517 hsa-miR-552-5p 0 0 1
chr9:35685280|35685517 hsa-miR-552-3p 0 0 1
chr9:35685280|35685517 hsa-miR-596 0 0 1
chr9:35685280|35685517 hsa-miR-639 0 0 1
chr9:35685280|35685517 hsa-miR-1301-5p 0 0 1
chr9:35685280|35685517 hsa-miR-1301-3p 0 0 1
chr9:35685280|35685517 hsa-miR-765 1 1 1
chr9:35685280|35685517 hsa-miR-1229-5p 0 0 1
chr9:35685280|35685517 hsa-miR-1229-3p 0 0 1
chr9:35685280|35685517 hsa-miR-1237-5p 0 0 1
chr9:35685280|35685517 hsa-miR-1237-3p 0 0 1
chr9:35685280|35685517 hsa-miR-1205 0 1 1
chr9:35685280|35685517 hsa-miR-1286 0 0 1
chr9:35685280|35685517 hsa-miR-1248 0 0 1
chr9:35685280|35685517 hsa-miR-1253 0 0 1
chr9:35685280|35685517 hsa-miR-1252-5p 0 0 1
chr9:35685280|35685517 hsa-miR-1252-3p 0 0 1
chr9:35685280|35685517 hsa-miR-483-3p 0 0 1
chr9:35685280|35685517 hsa-miR-509-3-5p 0 0 1
chr9:35685280|35685517 hsa-miR-509-5p 0 0 1
chr9:35685280|35685517 hsa-miR-515-5p 0 0 1
chr9:35685280|35685517 hsa-miR-542-3p 0 0 1
chr9:35685280|35685517 hsa-miR-138 0 0 1
chr9:35685280|35685517 hsa-miR-720 0 0 1
chr9:35685280|35685517 hsa-miR-1185 0 0 1
chr9:35685280|35685517 hsa-miR-1183 1 1 0
chr9:35685280|35685517 hsa-miR-3154 1 0 0
chr9:35685280|35685517 hsa-miR-3175 1 0 0
chr9:35685280|35685517 hsa-miR-4299 0 1 0
chr9:35685280|35685517 hsa-miR-4298 1 0 0
chr9:35685280|35685517 hsa-miR-4418 0 1 0
chr9:35685280|35685517 hsa-miR-4428 0 1 0
chr9:35685280|35685517 hsa-miR-4450 1 0 0
chr9:35685280|35685517 hsa-miR-3135b 0 1 0
chr9:35685280|35685517 hsa-miR-4533 0 1 0
chr9:35685280|35685517 hsa-miR-4647 1 1 0
chr9:35685280|35685517 hsa-miR-4689 1 1 0
chr9:35685280|35685517 hsa-miR-4721 1 0 0
chr9:35685280|35685517 hsa-miR-4739 1 0 0
chr9:35685280|35685517 hsa-miR-4784 1 1 0
chr9:35685280|35685517 hsa-miR-5047 0 1 0
chr9:35685280|35685517 hsa-miR-5703 0 1 0
chr9:35685280|35685517 hsa-miR-8052 1 0 0
chr9:35685280|35685517 hsa-miR-138-5p 0 1 0
chr9:35685280|35685517 hsa-miR-6734-5p 1 0 0
chr9:35685280|35685517 hsa-miR-3194-3p 0 1 0
chr9:35685280|35685517 hsa-miR-671-5p 1 0 0
chr9:35685280|35685517 hsa-miR-1972 0 1 0
chr9:35685280|35685517 hsa-miR-4768-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6089 1 0 0
chr9:35685280|35685517 hsa-miR-7847-3p 1 0 0
chr9:35685280|35685517 hsa-miR-6746-5p 1 0 0
chr9:35685280|35685517 hsa-miR-4709-3p 0 1 0
chr9:35685280|35685517 hsa-miR-4722-5p 1 1 0
chr9:35685280|35685517 hsa-miR-7160-5p 1 1 0
chr9:35685280|35685517 hsa-miR-6873-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6849-3p 1 1 0
chr9:35685280|35685517 hsa-miR-6787-3p 1 0 0
chr9:35685280|35685517 hsa-miR-1915-5p 1 1 0
chr9:35685280|35685517 hsa-miR-7108-5p 0 1 0
chr9:35685280|35685517 hsa-miR-3605-5p 1 0 0
chr9:35685280|35685517 hsa-miR-1224-5p 1 0 0
chr9:35685280|35685517 hsa-miR-4753-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6760-5p 1 1 0
chr9:35685280|35685517 hsa-miR-3150b-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6888-5p 0 1 0
chr9:35685280|35685517 hsa-miR-4436b-5p 1 0 0
chr9:35685280|35685517 hsa-miR-1226-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6894-3p 0 1 0
chr9:35685280|35685517 hsa-miR-4640-5p 1 1 0
chr9:35685280|35685517 hsa-miR-5001-3p 0 1 0
chr9:35685280|35685517 hsa-miR-7854-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6821-3p 1 0 0
chr9:35685280|35685517 hsa-miR-6809-3p 0 1 0
chr9:35685280|35685517 hsa-miR-7111-3p 1 1 0
chr9:35685280|35685517 hsa-miR-6830-3p 0 1 0
chr9:35685280|35685517 hsa-miR-4646-3p 0 1 0
chr9:35685280|35685517 hsa-miR-4772-3p 0 1 0
chr9:35685280|35685517 hsa-miR-2276-5p 0 1 0
chr9:35685280|35685517 hsa-miR-7848-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6738-3p 0 1 0
chr9:35685280|35685517 hsa-miR-4749-3p 0 1 0
chr9:35685280|35685517 hsa-miR-6509-3p 0 1 0
chr9:35685280|35685517 hsa-miR-1207-5p 1 0 0
chr9:35685280|35685517 hsa-miR-1233-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6812-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6865-5p 0 1 0
chr9:35685280|35685517 hsa-miR-6870-5p 1 0 0
chr9:35685280|35685517 hsa-miR-5001-5p 0 1 0
chr9:35685280|35685517 hsa-miR-6726-5p 0 1 0
chr9:35685280|35685517 hsa-miR-6754-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6815-5p 0 1 0
chr9:35685280|35685517 hsa-miR-11181-3p 1 1 0
chr9:35685280|35685517 hsa-miR-6722-3p 1 0 0
chr9:35685280|35685517 hsa-miR-6763-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6738-5p 1 0 0
chr9:35685280|35685517 hsa-miR-6858-5p 1 1 0
chr9:35685280|35685517 hsa-miR-939-5p 1 1 0
chr9:35685280|35685517 hsa-miR-3199 1 0 0
chr9:35685280|35685517 hsa-miR-324-3p 1 0 0
chr9:35685280|35685517 hsa-miR-3679-5p 1 0 0
chr9:35685280|35685517 hsa-miR-4667-5p 1 0 0
chr9:35685280|35685517 hsa-miR-3059-5p 1 0 0
chr9:35685280|35685517 hsa-miR-4723-3p 1 1 0
chr9:35685280|35685517 hsa-miR-6769b-3p 0 1 0
chr9:35685280|35685517 hsa-miR-10394-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:35685280|35685517
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MGMLQAGQRAGRGARLSPLHICGLNPQRCAWPPSAASPAVPSSPH
Nucleotide Sequence CTGGGCATGTTGCAGGCTGGGCAGCGAGCAGGCAGAGGGGCAAGGCTGTCACCTCTTCATATTTGCGGTCTGAATCCTCAGCGATGTGCTTGGCCTCCTTCAGCTGCATCTCCTGCAGTTCCATCTTCTCCTCAT
CircID chr9:35685280|35685517
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MELQEMQLKEAKHIAEDSDRKYEEVTALPLCLLAAQPATCPVLLH
Nucleotide Sequence ATGGAACTGCAGGAGATGCAGCTGAAGGAGGCCAAGCACATCGCTGAGGATTCAGACCGCAAATATGAAGAGGTGACAGCCTTGCCCCTCTGCCTGCTCGCTGCCCAGCCTGCAACATGCCCAGTCCTTCTCCACTGA
CircID chr9:35685280|35685517
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MPSLQHAQSFSTDLPSLSHSPQVARKLVILEGELERSEERAE
Nucleotide Sequence CTGCCCAGCCTGCAACATGCCCAGTCCTTCTCCACTGATCTACCCTCTCTTTCTCACTCCCCACAGGTGGCCAGGAAGCTGGTGATCCTGGAAGGAGAGCTGGAGCGCTCGGAGGAGAGGGCTGAG
CircID chr9:35685280|35685517
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MPARCPACNMPSPSPLIYPLFLTPHRWPGSW
Nucleotide Sequence CTGCCTGCTCGCTGCCCAGCCTGCAACATGCCCAGTCCTTCTCCACTGATCTACCCTCTCTTTCTCACTCCCCACAGGTGGCCAGGAAGCTGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab