CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35697630|35697785
Strand -
CircType exon
Host Gene ENSG00000137076.17;
Algorism CIRI2;
Sequence AGGGGATGTACTGCGGGACTGGGCGGGGCCAGGCCCTGGGGTTTGGCAGGCACTTTGGGGAGTGCTGGGGTTGGGCAGGTTGGGCCCCGACAGCCCAGAAGGCTTTGGTAGTGGCACGCACAGTCTCTGGGCCGGGTCTGCATTAAATAGAAGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35697630|35697785 hsa-miR-17-5p 0 0 1
chr9:35697630|35697785 hsa-miR-17-3p 0 0 1
chr9:35697630|35697785 hsa-miR-20a-5p 0 0 1
chr9:35697630|35697785 hsa-miR-20a-3p 0 0 1
chr9:35697630|35697785 hsa-miR-93-5p 0 0 1
chr9:35697630|35697785 hsa-miR-93-3p 0 0 1
chr9:35697630|35697785 hsa-miR-106a-5p 0 0 1
chr9:35697630|35697785 hsa-miR-106a-3p 0 0 1
chr9:35697630|35697785 hsa-miR-210-5p 0 0 1
chr9:35697630|35697785 hsa-miR-210-3p 0 0 1
chr9:35697630|35697785 hsa-miR-155-5p 0 0 1
chr9:35697630|35697785 hsa-miR-155-3p 0 0 1
chr9:35697630|35697785 hsa-miR-106b-5p 0 0 1
chr9:35697630|35697785 hsa-miR-106b-3p 0 0 1
chr9:35697630|35697785 hsa-miR-20b-5p 0 0 1
chr9:35697630|35697785 hsa-miR-20b-3p 0 0 1
chr9:35697630|35697785 hsa-miR-519e-5p 0 0 1
chr9:35697630|35697785 hsa-miR-519e-3p 0 0 1
chr9:35697630|35697785 hsa-miR-519d-5p 0 0 1
chr9:35697630|35697785 hsa-miR-519d-3p 0 0 1
chr9:35697630|35697785 hsa-miR-520g-5p 0 0 1
chr9:35697630|35697785 hsa-miR-520g-3p 0 0 1
chr9:35697630|35697785 hsa-miR-520h 0 1 1
chr9:35697630|35697785 hsa-miR-612 0 0 1
chr9:35697630|35697785 hsa-miR-1227-5p 0 0 1
chr9:35697630|35697785 hsa-miR-1227-3p 0 0 1
chr9:35697630|35697785 hsa-miR-1237-5p 0 0 1
chr9:35697630|35697785 hsa-miR-1237-3p 0 0 1
chr9:35697630|35697785 hsa-miR-941 0 0 1
chr9:35697630|35697785 hsa-miR-515-3p 0 0 1
chr9:35697630|35697785 hsa-miR-550 0 0 1
chr9:35697630|35697785 hsa-miR-1285 0 0 1
chr9:35697630|35697785 hsa-miR-596 0 1 0
chr9:35697630|35697785 hsa-miR-631 0 1 0
chr9:35697630|35697785 hsa-miR-2861 0 1 0
chr9:35697630|35697785 hsa-miR-4675 0 1 0
chr9:35697630|35697785 hsa-miR-4741 0 1 0
chr9:35697630|35697785 hsa-miR-4754 0 1 0
chr9:35697630|35697785 hsa-miR-6075 0 1 0
chr9:35697630|35697785 hsa-miR-7974 1 0 0
chr9:35697630|35697785 hsa-miR-6749-3p 1 0 0
chr9:35697630|35697785 hsa-miR-1273h-3p 0 1 0
chr9:35697630|35697785 hsa-miR-4763-5p 1 1 0
chr9:35697630|35697785 hsa-miR-7108-3p 0 1 0
chr9:35697630|35697785 hsa-miR-1247-5p 1 0 0
chr9:35697630|35697785 hsa-miR-4707-5p 1 0 0
chr9:35697630|35697785 hsa-miR-873-3p 0 1 0
chr9:35697630|35697785 hsa-miR-383-3p 0 1 0
chr9:35697630|35697785 hsa-miR-1296-5p 0 1 0
chr9:35697630|35697785 hsa-miR-6748-3p 1 0 0
chr9:35697630|35697785 hsa-miR-3162-3p 1 0 0
chr9:35697630|35697785 hsa-miR-6731-3p 1 0 0
chr9:35697630|35697785 hsa-miR-1915-3p 0 1 0
chr9:35697630|35697785 hsa-miR-3620-5p 0 1 0
chr9:35697630|35697785 hsa-miR-4685-5p 0 1 0
chr9:35697630|35697785 hsa-miR-1271-3p 0 1 0
chr9:35697630|35697785 hsa-miR-302c-3p 0 1 0
chr9:35697630|35697785 hsa-miR-4722-3p 0 1 0
chr9:35697630|35697785 hsa-miR-193b-3p 1 1 0
chr9:35697630|35697785 hsa-miR-10392-3p 1 1 0
chr9:35697630|35697785 hsa-miR-3130-5p 1 0 0
chr9:35697630|35697785 hsa-miR-6764-5p 0 1 0
chr9:35697630|35697785 hsa-miR-3136-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:35697630|35697785
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MGGARPWGLAGTLGSAGVGQVGPRQPRRLW
Nucleotide Sequence CTGGGCGGGGCCAGGCCCTGGGGTTTGGCAGGCACTTTGGGGAGTGCTGGGGTTGGGCAGGTTGGGCCCCGACAGCCCAGAAGGCTTTGGTAG
CircID chr9:35697630|35697785
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MRDWAGPGPGVWQALWGVLGLGRLGPDSPEGFGSGTHSLWAGSALNRR
Nucleotide Sequence CTGCGGGACTGGGCGGGGCCAGGCCCTGGGGTTTGGCAGGCACTTTGGGGAGTGCTGGGGTTGGGCAGGTTGGGCCCCGACAGCCCAGAAGGCTTTGGTAGTGGCACGCACAGTCTCTGGGCCGGGTCTGCATTAAATAGAAGA
CircID chr9:35697630|35697785
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MYCGTGRGQALGFGRHFGECWGWAGWAPTAQKALVVARTVSGPGLH
Nucleotide Sequence ATGTACTGCGGGACTGGGCGGGGCCAGGCCCTGGGGTTTGGCAGGCACTTTGGGGAGTGCTGGGGTTGGGCAGGTTGGGCCCCGACAGCCCAGAAGGCTTTGGTAGTGGCACGCACAGTCTCTGGGCCGGGTCTGCATTAA
CircID chr9:35697630|35697785
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MCVPLPKPSGLSGPNLPNPSTPQSACQTPGPGPAQSRSTSP
Nucleotide Sequence CTGTGCGTGCCACTACCAAAGCCTTCTGGGCTGTCGGGGCCCAACCTGCCCAACCCCAGCACTCCCCAAAGTGCCTGCCAAACCCCAGGGCCTGGCCCCGCCCAGTCCCGCAGTACATCCCCT
CircID chr9:35697630|35697785
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MQTRPRDCACHYQSLLGCRGPTCPTPALPKVPAKPQGLAPPSPAVHP
Nucleotide Sequence ATGCAGACCCGGCCCAGAGACTGTGCGTGCCACTACCAAAGCCTTCTGGGCTGTCGGGGCCCAACCTGCCCAACCCCAGCACTCCCCAAAGTGCCTGCCAAACCCCAGGGCCTGGCCCCGCCCAGTCCCGCAGTACATCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab