CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35706834|35707189
Strand +
CircType exon
Host Gene ENSG00000137076.17;
Algorism CIRI2;
Sequence TCATCCAGACAGCCCGGGCCCTCGCAGTCAATCCCCGGGACCCCCCGAGCTGGTCGGTGCTGGCCGGCCACTCCCGTACTGTCTCAGACTCCATCAAGAAGCTAATTACAAGCATGAGGTATTGAGGGATGGGGAACCAGTGTGGCTGGGGGGCATACATTGTGGCAGAATGGAGGATGGGCACTTGAGTGCAATGAGATGGGATGGTGTTGGGAGGATACAGGGGAAGGATAGGCTGGCCTTGCAGTAGGGGATGTTCTTGGTGTTGGAGCCCATGATGTGTCTGCAGGGACAAGGCTCCAGGGCAGCTGGAGTGTGAAACGGCCATTGCAGCTCTGAACAGTTGTCTACGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35706834|35707189 hsa-miR-22-5p 0 0 1
chr9:35706834|35707189 hsa-miR-22-3p 0 0 1
chr9:35706834|35707189 hsa-miR-25-5p 0 0 1
chr9:35706834|35707189 hsa-miR-25-3p 0 0 1
chr9:35706834|35707189 hsa-miR-32-5p 0 0 1
chr9:35706834|35707189 hsa-miR-32-3p 0 0 1
chr9:35706834|35707189 hsa-miR-217-5p 0 0 1
chr9:35706834|35707189 hsa-miR-217-3p 0 0 1
chr9:35706834|35707189 hsa-miR-136-5p 0 0 1
chr9:35706834|35707189 hsa-miR-136-3p 0 0 1
chr9:35706834|35707189 hsa-miR-150-5p 0 0 1
chr9:35706834|35707189 hsa-miR-150-3p 0 0 1
chr9:35706834|35707189 hsa-miR-363-5p 0 0 1
chr9:35706834|35707189 hsa-miR-363-3p 0 0 1
chr9:35706834|35707189 hsa-miR-367-5p 0 0 1
chr9:35706834|35707189 hsa-miR-367-3p 0 0 1
chr9:35706834|35707189 hsa-miR-377-5p 0 0 1
chr9:35706834|35707189 hsa-miR-377-3p 0 0 1
chr9:35706834|35707189 hsa-miR-526b-5p 0 0 1
chr9:35706834|35707189 hsa-miR-526b-3p 0 0 1
chr9:35706834|35707189 hsa-miR-92b-5p 0 0 1
chr9:35706834|35707189 hsa-miR-92b-3p 0 0 1
chr9:35706834|35707189 hsa-miR-558 0 0 1
chr9:35706834|35707189 hsa-miR-626 0 0 1
chr9:35706834|35707189 hsa-miR-766-5p 0 0 1
chr9:35706834|35707189 hsa-miR-766-3p 0 0 1
chr9:35706834|35707189 hsa-miR-874-5p 0 0 1
chr9:35706834|35707189 hsa-miR-874-3p 0 0 1
chr9:35706834|35707189 hsa-miR-943 0 0 1
chr9:35706834|35707189 hsa-miR-1231 0 0 1
chr9:35706834|35707189 hsa-miR-1255a 0 0 1
chr9:35706834|35707189 hsa-miR-615-5p 1 0 1
chr9:35706834|35707189 hsa-miR-542-5p 0 0 1
chr9:35706834|35707189 hsa-miR-146b-3p 0 0 1
chr9:35706834|35707189 hsa-miR-1289 0 0 1
chr9:35706834|35707189 hsa-miR-508-5p 0 0 1
chr9:35706834|35707189 hsa-miR-361-3p 0 0 1
chr9:35706834|35707189 hsa-miR-501-5p 0 0 1
chr9:35706834|35707189 hsa-miR-875-5p 0 0 1
chr9:35706834|35707189 hsa-miR-331-3p 0 0 1
chr9:35706834|35707189 hsa-miR-362-5p 0 0 1
chr9:35706834|35707189 hsa-miR-509-3-5p 0 0 1
chr9:35706834|35707189 hsa-miR-509-5p 0 0 1
chr9:35706834|35707189 hsa-miR-1255b 0 0 1
chr9:35706834|35707189 hsa-miR-1308 0 0 1
chr9:35706834|35707189 hsa-miR-768-3p 0 0 1
chr9:35706834|35707189 hsa-miR-549 0 0 1
chr9:35706834|35707189 hsa-miR-92a 0 0 1
chr9:35706834|35707189 hsa-miR-101 0 0 1
chr9:35706834|35707189 hsa-miR-764 1 0 0
chr9:35706834|35707189 hsa-miR-1825 1 0 0
chr9:35706834|35707189 hsa-miR-1913 1 0 0
chr9:35706834|35707189 hsa-miR-4313 1 0 0
chr9:35706834|35707189 hsa-miR-4326 1 0 0
chr9:35706834|35707189 hsa-miR-4268 1 0 0
chr9:35706834|35707189 hsa-miR-4281 1 0 0
chr9:35706834|35707189 hsa-miR-4449 1 0 0
chr9:35706834|35707189 hsa-miR-3972 1 0 0
chr9:35706834|35707189 hsa-miR-4641 1 0 0
chr9:35706834|35707189 hsa-miR-7703 1 0 0
chr9:35706834|35707189 hsa-miR-6749-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4665-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6822-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6881-3p 1 0 0
chr9:35706834|35707189 hsa-miR-3677-5p 1 0 0
chr9:35706834|35707189 hsa-miR-4655-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6849-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6787-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6845-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6793-5p 1 0 0
chr9:35706834|35707189 hsa-miR-877-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6732-5p 1 0 0
chr9:35706834|35707189 hsa-miR-23a-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6858-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4713-5p 1 0 0
chr9:35706834|35707189 hsa-miR-532-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6884-3p 1 0 0
chr9:35706834|35707189 hsa-miR-5088-5p 1 0 0
chr9:35706834|35707189 hsa-miR-1226-5p 1 0 0
chr9:35706834|35707189 hsa-miR-4763-5p 1 0 0
chr9:35706834|35707189 hsa-miR-1247-5p 1 0 0
chr9:35706834|35707189 hsa-miR-1909-5p 1 0 0
chr9:35706834|35707189 hsa-miR-4707-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6803-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6757-3p 1 0 0
chr9:35706834|35707189 hsa-miR-7113-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6771-5p 1 0 0
chr9:35706834|35707189 hsa-miR-3677-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6749-5p 1 0 0
chr9:35706834|35707189 hsa-miR-7111-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4787-5p 1 0 0
chr9:35706834|35707189 hsa-miR-324-5p 1 0 0
chr9:35706834|35707189 hsa-miR-5196-3p 1 0 0
chr9:35706834|35707189 hsa-miR-339-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6870-3p 1 0 0
chr9:35706834|35707189 hsa-miR-3922-5p 1 0 0
chr9:35706834|35707189 hsa-miR-4708-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4707-5p 1 0 0
chr9:35706834|35707189 hsa-miR-1237-3p 1 0 0
chr9:35706834|35707189 hsa-miR-1236-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4742-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6811-3p 1 0 0
chr9:35706834|35707189 hsa-miR-1226-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4687-5p 1 0 0
chr9:35706834|35707189 hsa-miR-3158-3p 1 0 0
chr9:35706834|35707189 hsa-miR-629-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6513-3p 1 0 0
chr9:35706834|35707189 hsa-miR-5088-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4749-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6777-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6883-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6768-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6748-3p 1 0 0
chr9:35706834|35707189 hsa-miR-449b-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6734-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6729-3p 1 0 0
chr9:35706834|35707189 hsa-miR-371b-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6847-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6780b-3p 1 0 0
chr9:35706834|35707189 hsa-miR-299-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6752-5p 1 0 0
chr9:35706834|35707189 hsa-miR-7110-5p 1 0 0
chr9:35706834|35707189 hsa-miR-3127-3p 1 0 0
chr9:35706834|35707189 hsa-miR-3620-5p 1 0 0
chr9:35706834|35707189 hsa-miR-328-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6795-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6848-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6889-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6885-5p 1 0 0
chr9:35706834|35707189 hsa-miR-1914-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6724-5p 1 0 0
chr9:35706834|35707189 hsa-miR-4731-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6792-3p 1 0 0
chr9:35706834|35707189 hsa-miR-6810-3p 1 0 0
chr9:35706834|35707189 hsa-miR-10400-3p 1 0 0
chr9:35706834|35707189 hsa-miR-3059-5p 1 0 0
chr9:35706834|35707189 hsa-miR-6783-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4691-5p 1 0 0
chr9:35706834|35707189 hsa-miR-33b-3p 1 0 0
chr9:35706834|35707189 hsa-miR-5006-3p 1 0 0
chr9:35706834|35707189 hsa-miR-4769-3p 1 0 0
chr9:35706834|35707189 hsa-miR-412-3p 1 0 0
chr9:35706834|35707189 hsa-miR-549a-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:35706834|35707189
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence MVGAGRPLPYCLRLHQEANYKHEVLRDGEPVWLGGIHCGRMEDGHLSAMRWDGVGRIQGKDRLALQ
Nucleotide Sequence CTGGTCGGTGCTGGCCGGCCACTCCCGTACTGTCTCAGACTCCATCAAGAAGCTAATTACAAGCATGAGGTATTGAGGGATGGGGAACCAGTGTGGCTGGGGGGCATACATTGTGGCAGAATGGAGGATGGGCACTTGAGTGCAATGAGATGGGATGGTGTTGGGAGGATACAGGGGAAGGATAGGCTGGCCTTGCAGTAG
CircID chr9:35706834|35707189
ORF Type ORF2
Protein Length 68
Nucleotide Length 207
Protein Sequence MPWSLVPADTSWAPTPRTSPTARPAYPSPVSSQHHPISLHSSAHPPFCHNVCPPATLVPHPSIPHACN
Nucleotide Sequence CTGCCCTGGAGCCTTGTCCCTGCAGACACATCATGGGCTCCAACACCAAGAACATCCCCTACTGCAAGGCCAGCCTATCCTTCCCCTGTATCCTCCCAACACCATCCCATCTCATTGCACTCAAGTGCCCATCCTCCATTCTGCCACAATGTATGCCCCCCAGCCACACTGGTTCCCCATCCCTCAATACCTCATGCTTGTAATTAG
CircID chr9:35706834|35707189
ORF Type ORF3
Protein Length 114
Nucleotide Length 342
Protein Sequence MFRAAMAVSHSSCPGALSLQTHHGLQHQEHPLLQGQPILPLYPPNTIPSHCTQVPILHSATMYAPQPHWFPIPQYLMLVISFLMESETVREWPASTDQLGGSRGLTARARAVWM
Nucleotide Sequence CTGTTCAGAGCTGCAATGGCCGTTTCACACTCCAGCTGCCCTGGAGCCTTGTCCCTGCAGACACATCATGGGCTCCAACACCAAGAACATCCCCTACTGCAAGGCCAGCCTATCCTTCCCCTGTATCCTCCCAACACCATCCCATCTCATTGCACTCAAGTGCCCATCCTCCATTCTGCCACAATGTATGCCCCCCAGCCACACTGGTTCCCCATCCCTCAATACCTCATGCTTGTAATTAGCTTCTTGATGGAGTCTGAGACAGTACGGGAGTGGCCGGCCAGCACCGACCAGCTCGGGGGGTCCCGGGGATTGACTGCGAGGGCCCGGGCTGTCTGGATG
CircID chr9:35706834|35707189
ORF Type ORF4
Protein Length 75
Nucleotide Length 228
Protein Sequence MQWPFHTPAALEPCPCRHIMGSNTKNIPYCKASLSFPCILPTPSHLIALKCPSSILPQCMPPSHTGSPSLNTSCL
Nucleotide Sequence CTGCAATGGCCGTTTCACACTCCAGCTGCCCTGGAGCCTTGTCCCTGCAGACACATCATGGGCTCCAACACCAAGAACATCCCCTACTGCAAGGCCAGCCTATCCTTCCCCTGTATCCTCCCAACACCATCCCATCTCATTGCACTCAAGTGCCCATCCTCCATTCTGCCACAATGTATGCCCCCCAGCCACACTGGTTCCCCATCCCTCAATACCTCATGCTTGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab