CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35713020|35713298
Strand -
CircType exon
Host Gene ENSG00000137076.17;
Algorism CIRI2;
Sequence CTGCCACATCCCGAGCTGCAATACCTGCATAATTCTCATTGCCCTGGGCAACCTCTCCCAGTAGCTGGGCGATGGCTGAGCTCACGGCTTTGGTGCTGTTGCCCAGGTCCTGGGTACACTTCTCCAT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35713020|35713298 hsa-miR-25-5p 0 0 1
chr9:35713020|35713298 hsa-miR-25-3p 0 0 1
chr9:35713020|35713298 hsa-miR-29a-5p 0 0 1
chr9:35713020|35713298 hsa-miR-29a-3p 0 0 1
chr9:35713020|35713298 hsa-miR-32-5p 0 0 1
chr9:35713020|35713298 hsa-miR-32-3p 0 0 1
chr9:35713020|35713298 hsa-miR-29c-5p 0 0 1
chr9:35713020|35713298 hsa-miR-29c-3p 0 0 1
chr9:35713020|35713298 hsa-miR-363-5p 0 0 1
chr9:35713020|35713298 hsa-miR-363-3p 0 0 1
chr9:35713020|35713298 hsa-miR-367-5p 0 0 1
chr9:35713020|35713298 hsa-miR-367-3p 0 0 1
chr9:35713020|35713298 hsa-miR-492 0 1 1
chr9:35713020|35713298 hsa-miR-92b-5p 0 0 1
chr9:35713020|35713298 hsa-miR-92b-3p 0 0 1
chr9:35713020|35713298 hsa-miR-580-5p 0 0 1
chr9:35713020|35713298 hsa-miR-580-3p 0 0 1
chr9:35713020|35713298 hsa-miR-612 0 1 1
chr9:35713020|35713298 hsa-miR-631 0 1 1
chr9:35713020|35713298 hsa-miR-657 0 0 1
chr9:35713020|35713298 hsa-miR-1301-5p 0 0 1
chr9:35713020|35713298 hsa-miR-1301-3p 0 0 1
chr9:35713020|35713298 hsa-miR-491-3p 0 0 1
chr9:35713020|35713298 hsa-miR-1285 0 0 1
chr9:35713020|35713298 hsa-miR-29b 0 0 1
chr9:35713020|35713298 hsa-miR-92a 0 0 1
chr9:35713020|35713298 hsa-miR-3661 0 1 0
chr9:35713020|35713298 hsa-miR-4518 0 1 0
chr9:35713020|35713298 hsa-miR-5047 0 1 0
chr9:35713020|35713298 hsa-miR-5090 1 0 0
chr9:35713020|35713298 hsa-miR-6086 1 1 0
chr9:35713020|35713298 hsa-miR-12127 1 0 0
chr9:35713020|35713298 hsa-miR-12131 0 1 0
chr9:35713020|35713298 hsa-miR-6840-3p 0 1 0
chr9:35713020|35713298 hsa-miR-6799-5p 1 0 0
chr9:35713020|35713298 hsa-miR-3192-5p 0 1 0
chr9:35713020|35713298 hsa-miR-593-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6787-3p 0 1 0
chr9:35713020|35713298 hsa-miR-656-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6798-5p 1 0 0
chr9:35713020|35713298 hsa-miR-3934-3p 1 0 0
chr9:35713020|35713298 hsa-miR-939-3p 0 1 0
chr9:35713020|35713298 hsa-miR-1226-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6753-5p 1 0 0
chr9:35713020|35713298 hsa-miR-30c-2-3p 0 1 0
chr9:35713020|35713298 hsa-miR-6501-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6824-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6792-5p 1 0 0
chr9:35713020|35713298 hsa-miR-3670 0 1 0
chr9:35713020|35713298 hsa-miR-1298-3p 0 1 0
chr9:35713020|35713298 hsa-miR-1233-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6775-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6803-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6879-5p 1 0 0
chr9:35713020|35713298 hsa-miR-1915-3p 1 1 0
chr9:35713020|35713298 hsa-miR-4632-5p 1 0 0
chr9:35713020|35713298 hsa-miR-4685-5p 1 1 0
chr9:35713020|35713298 hsa-miR-6729-5p 1 0 0
chr9:35713020|35713298 hsa-miR-3187-5p 0 1 0
chr9:35713020|35713298 hsa-miR-30c-1-3p 0 1 0
chr9:35713020|35713298 hsa-miR-6731-5p 1 1 0
chr9:35713020|35713298 hsa-miR-1285-3p 0 1 0
chr9:35713020|35713298 hsa-miR-377-5p 1 1 0
chr9:35713020|35713298 hsa-miR-4646-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6837-5p 1 1 0
chr9:35713020|35713298 hsa-miR-323b-5p 1 0 0
chr9:35713020|35713298 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:35713020|35713298
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence LPHPELQYLHNSHCPGQPLPVAGRWLSSRLWCCCPGPGYTSP
Nucleotide Sequence CTGCCACATCCCGAGCTGCAATACCTGCATAATTCTCATTGCCCTGGGCAACCTCTCCCAGTAGCTGGGCGATGGCTGAGCTCACGGCTTTGGTGCTGTTGCCCAGGTCCTGGGTACACTTCTCCA

CircID chr9:35713020|35713298
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MPWATSPSSWAMAELTALVLLPRSWVHFS
Nucleotide Sequence TTGCCCTGGGCAACCTCTCCCAGTAGCTGGGCGATGGCTGAGCTCACGGCTTTGGTGCTGTTGCCCAGGTCCTGGGTACACTTCTCC

CircID chr9:35713020|35713298
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MEKCTQDLGNSTKAVSSAIAQLLGEVAQGNENYAGIAARDVA
Nucleotide Sequence ATGGAGAAGTGTACCCAGGACCTGGGCAACAGCACCAAAGCCGTGAGCTCAGCCATCGCCCAGCTACTGGGAGAGGTTGCCCAGGGCAATGAGAATTATGCAGGTATTGCAGCTCGGGATGTGGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites