CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35732670|35732905
Strand +
CircType exon
Host Gene ENSG00000107175.9;
Algorism CIRI2;
Sequence CTACCTCAGAAAGCGGCAGCGCCCAGTCCAGTGGGGCCCTCACGGCCTCATCGGGTGCCGTCCCCAAATCTCCACTTTCCTCTAGCAGGAAGGCCAGCAGGTCTTGGTCACCAGCATCCAATTCCAGCTCCATTTGGGACAACTACGGAAAGGGTGGGCCACCGGGCCCCAACGTCCGAAGCCCAGACACGAGCCCCAGGCCAGCTGTAGGCCTCGGGCACCTATCCACTGTCCCT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35732670|35732905 hsa-let-7b-5p 0 0 1
chr9:35732670|35732905 hsa-let-7b-3p 0 0 1
chr9:35732670|35732905 hsa-let-7c-5p 0 0 1
chr9:35732670|35732905 hsa-let-7c-3p 0 0 1
chr9:35732670|35732905 hsa-let-7d-5p 0 0 1
chr9:35732670|35732905 hsa-let-7d-3p 0 0 1
chr9:35732670|35732905 hsa-let-7e-5p 0 0 1
chr9:35732670|35732905 hsa-let-7e-3p 0 0 1
chr9:35732670|35732905 hsa-miR-98-5p 0 0 1
chr9:35732670|35732905 hsa-miR-98-3p 0 0 1
chr9:35732670|35732905 hsa-miR-187-5p 0 0 1
chr9:35732670|35732905 hsa-miR-187-3p 0 0 1
chr9:35732670|35732905 hsa-let-7g-5p 0 0 1
chr9:35732670|35732905 hsa-let-7g-3p 0 0 1
chr9:35732670|35732905 hsa-let-7i-5p 0 0 1
chr9:35732670|35732905 hsa-let-7i-3p 0 0 1
chr9:35732670|35732905 hsa-miR-370-5p 0 0 1
chr9:35732670|35732905 hsa-miR-370-3p 0 0 1
chr9:35732670|35732905 hsa-miR-422a 0 0 1
chr9:35732670|35732905 hsa-miR-202-5p 0 0 1
chr9:35732670|35732905 hsa-miR-202-3p 0 0 1
chr9:35732670|35732905 hsa-miR-612 0 0 1
chr9:35732670|35732905 hsa-miR-620 0 0 1
chr9:35732670|35732905 hsa-miR-661 0 1 1
chr9:35732670|35732905 hsa-miR-877-5p 0 0 1
chr9:35732670|35732905 hsa-miR-877-3p 0 0 1
chr9:35732670|35732905 hsa-miR-1231 0 1 1
chr9:35732670|35732905 hsa-miR-663b 0 1 1
chr9:35732670|35732905 hsa-miR-1270 0 0 1
chr9:35732670|35732905 hsa-miR-1288-5p 0 0 1
chr9:35732670|35732905 hsa-miR-1288-3p 0 0 1
chr9:35732670|35732905 hsa-miR-296-5p 0 0 1
chr9:35732670|35732905 hsa-miR-1207-3p 0 1 1
chr9:35732670|35732905 hsa-miR-378 0 0 1
chr9:35732670|35732905 hsa-miR-1269 0 0 1
chr9:35732670|35732905 hsa-miR-138 0 0 1
chr9:35732670|35732905 hsa-let-7a 0 0 1
chr9:35732670|35732905 hsa-let-7f 0 0 1
chr9:35732670|35732905 hsa-miR-1285 0 0 1
chr9:35732670|35732905 hsa-miR-762 1 0 0
chr9:35732670|35732905 hsa-miR-1269a 0 1 0
chr9:35732670|35732905 hsa-miR-3125 0 1 0
chr9:35732670|35732905 hsa-miR-3176 0 1 0
chr9:35732670|35732905 hsa-miR-3196 1 0 0
chr9:35732670|35732905 hsa-miR-4297 0 1 0
chr9:35732670|35732905 hsa-miR-378c 0 1 0
chr9:35732670|35732905 hsa-miR-4299 0 1 0
chr9:35732670|35732905 hsa-miR-4260 0 1 0
chr9:35732670|35732905 hsa-miR-1268b 1 0 0
chr9:35732670|35732905 hsa-miR-378e 0 1 0
chr9:35732670|35732905 hsa-miR-378f 0 1 0
chr9:35732670|35732905 hsa-miR-378g 0 1 0
chr9:35732670|35732905 hsa-miR-378h 0 1 0
chr9:35732670|35732905 hsa-miR-4486 0 1 0
chr9:35732670|35732905 hsa-miR-4492 1 0 0
chr9:35732670|35732905 hsa-miR-4498 1 0 0
chr9:35732670|35732905 hsa-miR-4508 1 0 0
chr9:35732670|35732905 hsa-miR-4512 0 1 0
chr9:35732670|35732905 hsa-miR-1269b 0 1 0
chr9:35732670|35732905 hsa-miR-378i 0 1 0
chr9:35732670|35732905 hsa-miR-1587 1 0 0
chr9:35732670|35732905 hsa-miR-4686 1 1 0
chr9:35732670|35732905 hsa-miR-6128 0 1 0
chr9:35732670|35732905 hsa-miR-8082 0 1 0
chr9:35732670|35732905 hsa-miR-10226 1 0 0
chr9:35732670|35732905 hsa-miR-12115 1 1 0
chr9:35732670|35732905 hsa-miR-6765-5p 1 0 0
chr9:35732670|35732905 hsa-miR-3692-5p 0 1 0
chr9:35732670|35732905 hsa-miR-1227-5p 0 1 0
chr9:35732670|35732905 hsa-miR-6089 1 1 0
chr9:35732670|35732905 hsa-miR-1301-3p 1 1 0
chr9:35732670|35732905 hsa-miR-874-5p 0 1 0
chr9:35732670|35732905 hsa-miR-6741-5p 1 1 0
chr9:35732670|35732905 hsa-miR-7845-5p 0 1 0
chr9:35732670|35732905 hsa-miR-185-3p 1 0 0
chr9:35732670|35732905 hsa-miR-6874-5p 1 1 0
chr9:35732670|35732905 hsa-miR-6810-5p 0 1 0
chr9:35732670|35732905 hsa-miR-5008-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6852-5p 0 1 0
chr9:35732670|35732905 hsa-miR-1226-5p 0 1 0
chr9:35732670|35732905 hsa-miR-3944-3p 1 0 0
chr9:35732670|35732905 hsa-miR-92b-5p 0 1 0
chr9:35732670|35732905 hsa-miR-6847-5p 0 1 0
chr9:35732670|35732905 hsa-miR-3191-3p 0 1 0
chr9:35732670|35732905 hsa-miR-3681-5p 0 1 0
chr9:35732670|35732905 hsa-miR-1244 0 1 0
chr9:35732670|35732905 hsa-miR-6816-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6726-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6743-5p 0 1 0
chr9:35732670|35732905 hsa-miR-6803-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6751-5p 1 0 0
chr9:35732670|35732905 hsa-miR-3620-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6846-5p 1 0 0
chr9:35732670|35732905 hsa-miR-6848-5p 1 0 0
chr9:35732670|35732905 hsa-miR-10394-3p 1 0 0
chr9:35732670|35732905 hsa-miR-378a-3p 0 1 0
chr9:35732670|35732905 hsa-miR-6849-5p 0 1 0
chr9:35732670|35732905 hsa-miR-6893-3p 0 1 0
chr9:35732670|35732905 hsa-miR-5581-5p 0 1 0
chr9:35732670|35732905 hsa-miR-378d 0 1 0
chr9:35732670|35732905 hsa-miR-4315 0 1 0
chr9:35732670|35732905 hsa-miR-3922-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:35732670|35732905
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MVTSIQFQLHLGQLRKGWATGPQRPKPRHEPQASCRPRAPIHCP
Nucleotide Sequence TTGGTCACCAGCATCCAATTCCAGCTCCATTTGGGACAACTACGGAAAGGGTGGGCCACCGGGCCCCAACGTCCGAAGCCCAGACACGAGCCCCAGGCCAGCTGTAGGCCTCGGGCACCTATCCACTGTCCC
CircID chr9:35732670|35732905
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MSQMELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEV
Nucleotide Sequence TTGTCCCAAATGGAGCTGGAATTGGATGCTGGTGACCAAGACCTGCTGGCCTTCCTGCTAGAGGAAAGTGGAGATTTGGGGACGGCACCCGATGAGGCCGTGAGGGCCCCACTGGACTGGGCGCTGCCGCTTTCTGAGGTA
CircID chr9:35732670|35732905
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MAWGSCLGFGRWGPVAHPFRSCPKWSWNWMLVTKTCWPSC
Nucleotide Sequence CTGGCCTGGGGCTCGTGTCTGGGCTTCGGACGTTGGGGCCCGGTGGCCCACCCTTTCCGTAGTTGTCCCAAATGGAGCTGGAATTGGATGCTGGTGACCAAGACCTGCTGGCCTTCCTGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab