CircRNA Information

General Information
circRNA Basic Information
CircID chr9:35753192|35753454
Strand +
CircType exon
Host Gene ENSG00000107185.9;
Algorism CIRI2;
Sequence TCCTGTTATAAAACAAAAAGGCCCACATATGGTAGGTGACAGCTTAGTTAGGAGGACCAAGGGGCCACTGAAAGGGGCTCTGTGGGGGGAAAACTGTGAGAGAGGGAACATGTGGGCAGGGATAAAGGCAGCCTTTCACTGTGCTGACTCCTTCCCCTATCCTTGGTTCCCCAGGTCCCAGCATCCCATCGACTTCCCGGCTGGGTGTGAGGTACGTCAGGAGGCAGGAACCTGCCAGTTCTCCTTGGTGCAAAAATCTGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:35753192|35753454 hsa-miR-27a-5p 0 0 1
chr9:35753192|35753454 hsa-miR-27a-3p 0 0 1
chr9:35753192|35753454 hsa-miR-27b-5p 0 0 1
chr9:35753192|35753454 hsa-miR-27b-3p 0 0 1
chr9:35753192|35753454 hsa-miR-146a-5p 0 0 1
chr9:35753192|35753454 hsa-miR-146a-3p 0 0 1
chr9:35753192|35753454 hsa-miR-133b 0 1 1
chr9:35753192|35753454 hsa-miR-488-5p 0 0 1
chr9:35753192|35753454 hsa-miR-488-3p 0 0 1
chr9:35753192|35753454 hsa-miR-492 0 1 1
chr9:35753192|35753454 hsa-miR-507 0 0 1
chr9:35753192|35753454 hsa-miR-557 0 0 1
chr9:35753192|35753454 hsa-miR-631 0 0 1
chr9:35753192|35753454 hsa-miR-657 0 1 1
chr9:35753192|35753454 hsa-miR-1228-5p 0 0 1
chr9:35753192|35753454 hsa-miR-1228-3p 0 0 1
chr9:35753192|35753454 hsa-miR-663b 0 0 1
chr9:35753192|35753454 hsa-miR-129-5p 0 0 1
chr9:35753192|35753454 hsa-miR-1225-3p 0 1 1
chr9:35753192|35753454 hsa-miR-767-5p 0 0 1
chr9:35753192|35753454 hsa-miR-299-3p 0 0 1
chr9:35753192|35753454 hsa-miR-188-5p 0 0 1
chr9:35753192|35753454 hsa-miR-1207-5p 1 0 1
chr9:35753192|35753454 hsa-miR-146b-5p 0 0 1
chr9:35753192|35753454 hsa-miR-342-3p 0 0 1
chr9:35753192|35753454 hsa-miR-450b-5p 0 0 1
chr9:35753192|35753454 hsa-miR-128 0 0 1
chr9:35753192|35753454 hsa-miR-642 0 0 1
chr9:35753192|35753454 hsa-miR-220a 0 0 1
chr9:35753192|35753454 hsa-miR-133a 0 0 1
chr9:35753192|35753454 hsa-miR-346 1 0 0
chr9:35753192|35753454 hsa-miR-762 1 0 0
chr9:35753192|35753454 hsa-miR-1290 0 1 0
chr9:35753192|35753454 hsa-miR-3183 0 1 0
chr9:35753192|35753454 hsa-miR-3649 0 1 0
chr9:35753192|35753454 hsa-miR-3661 0 1 0
chr9:35753192|35753454 hsa-miR-4533 0 1 0
chr9:35753192|35753454 hsa-miR-4736 0 1 0
chr9:35753192|35753454 hsa-miR-8089 1 1 0
chr9:35753192|35753454 hsa-miR-128-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6749-3p 1 0 0
chr9:35753192|35753454 hsa-miR-500b-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6747-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6892-3p 1 1 0
chr9:35753192|35753454 hsa-miR-6728-5p 1 1 0
chr9:35753192|35753454 hsa-miR-7851-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6741-5p 1 0 0
chr9:35753192|35753454 hsa-miR-23b-5p 0 1 0
chr9:35753192|35753454 hsa-miR-7110-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6882-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6852-5p 0 1 0
chr9:35753192|35753454 hsa-miR-204-3p 0 1 0
chr9:35753192|35753454 hsa-miR-7113-3p 1 0 0
chr9:35753192|35753454 hsa-miR-3679-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6749-5p 1 0 0
chr9:35753192|35753454 hsa-miR-642b-5p 0 1 0
chr9:35753192|35753454 hsa-miR-6878-3p 0 1 0
chr9:35753192|35753454 hsa-miR-7111-3p 1 0 0
chr9:35753192|35753454 hsa-miR-6824-5p 0 1 0
chr9:35753192|35753454 hsa-miR-30a-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6769a-3p 0 1 0
chr9:35753192|35753454 hsa-miR-660-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6752-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6883-3p 1 0 0
chr9:35753192|35753454 hsa-miR-1229-3p 1 0 0
chr9:35753192|35753454 hsa-miR-642a-5p 0 1 0
chr9:35753192|35753454 hsa-miR-133a-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6812-5p 1 0 0
chr9:35753192|35753454 hsa-miR-6737-5p 0 1 0
chr9:35753192|35753454 hsa-miR-7107-5p 1 0 0
chr9:35753192|35753454 hsa-miR-5196-5p 1 1 0
chr9:35753192|35753454 hsa-miR-6780b-5p 0 1 0
chr9:35753192|35753454 hsa-miR-4725-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6777-5p 1 0 0
chr9:35753192|35753454 hsa-miR-6795-5p 1 0 0
chr9:35753192|35753454 hsa-miR-6848-5p 1 0 0
chr9:35753192|35753454 hsa-miR-6889-5p 1 1 0
chr9:35753192|35753454 hsa-miR-939-5p 1 1 0
chr9:35753192|35753454 hsa-miR-4700-5p 0 1 0
chr9:35753192|35753454 hsa-miR-4747-5p 0 1 0
chr9:35753192|35753454 hsa-miR-6876-5p 0 1 0
chr9:35753192|35753454 hsa-miR-4667-5p 0 1 0
chr9:35753192|35753454 hsa-miR-6810-3p 0 1 0
chr9:35753192|35753454 hsa-miR-6829-3p 0 1 0
chr9:35753192|35753454 hsa-miR-3059-5p 1 0 0
chr9:35753192|35753454 hsa-miR-4723-3p 1 1 0
chr9:35753192|35753454 hsa-miR-6769b-3p 1 0 0
chr9:35753192|35753454 hsa-miR-6744-3p 0 1 0
chr9:35753192|35753454 hsa-miR-433-5p 0 1 0
chr9:35753192|35753454 hsa-miR-7153-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:35753192|35753454
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence MVGDSLVRRTKGPLKGALWGENCERGNMWAGIKAAFHCADSFPYPWFPRSQHPIDFPAGCEVRQEAGTCQFSLVQKSD
Nucleotide Sequence ATGGTAGGTGACAGCTTAGTTAGGAGGACCAAGGGGCCACTGAAAGGGGCTCTGTGGGGGGAAAACTGTGAGAGAGGGAACATGTGGGCAGGGATAAAGGCAGCCTTTCACTGTGCTGACTCCTTCCCCTATCCTTGGTTCCCCAGGTCCCAGCATCCCATCGACTTCCCGGCTGGGTGTGAGGTACGTCAGGAGGCAGGAACCTGCCAGTTCTCCTTGGTGCAAAAATCTGAC
CircID chr9:35753192|35753454
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MTPSPILGSPGPSIPSTSRLGVRYVRRQEPASSPWCKNLT
Nucleotide Sequence CTGACTCCTTCCCCTATCCTTGGTTCCCCAGGTCCCAGCATCCCATCGACTTCCCGGCTGGGTGTGAGGTACGTCAGGAGGCAGGAACCTGCCAGTTCTCCTTGGTGCAAAAATCTGACC
CircID chr9:35753192|35753454
ORF Type ORF3
Protein Length 59
Nucleotide Length 180
Protein Sequence MPPDVPHTQPGSRWDAGTWGTKDRGRSQHSERLPLSLPTCSLSHSFPPTEPLSVAPWSS
Nucleotide Sequence CTGCCTCCTGACGTACCTCACACCCAGCCGGGAAGTCGATGGGATGCTGGGACCTGGGGAACCAAGGATAGGGGAAGGAGTCAGCACAGTGAAAGGCTGCCTTTATCCCTGCCCACATGTTCCCTCTCTCACAGTTTTCCCCCCACAGAGCCCCTTTCAGTGGCCCCTTGGTCCTCCTAA
CircID chr9:35753192|35753454
ORF Type ORF4
Protein Length 69
Nucleotide Length 210
Protein Sequence MHQGELAGSCLLTYLTPSREVDGMLGPGEPRIGEGVSTVKGCLYPCPHVPSLTVFPPQSPFQWPLGPPN
Nucleotide Sequence TTGCACCAAGGAGAACTGGCAGGTTCCTGCCTCCTGACGTACCTCACACCCAGCCGGGAAGTCGATGGGATGCTGGGACCTGGGGAACCAAGGATAGGGGAAGGAGTCAGCACAGTGAAAGGCTGCCTTTATCCCTGCCCACATGTTCCCTCTCTCACAGTTTTCCCCCCACAGAGCCCCTTTCAGTGGCCCCTTGGTCCTCCTAACTAA
CircID chr9:35753192|35753454
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MFPLSQFSPHRAPFSGPLVLLTKLSPTICGPFCFITG
Nucleotide Sequence ATGTTCCCTCTCTCACAGTTTTCCCCCCACAGAGCCCCTTTCAGTGGCCCCTTGGTCCTCCTAACTAAGCTGTCACCTACCATATGTGGGCCTTTTTGTTTTATAACAGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab