CircRNA Information

General Information
circRNA Basic Information
CircID chr9:38396760|38396916
Strand +
CircType exon
Host Gene ENSG00000137124.6;
Algorism CIRI2;
Sequence GCTCTCCGCCACAGAGGAGTTTTGCGCCCTCCTTCTGGCCAAGCTGGATGTAGCCTAGGACTCGTTCAAACTGCTCCTTGTCCACCTGAGGCCCCTGCTGGGTGTCCAGCTCAAAGGGGTTCCCCACTTTCCTCTGCTTTGCTTTCTCCACGGTTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:38396760|38396916 hsa-miR-214-5p 0 0 1
chr9:38396760|38396916 hsa-miR-214-3p 0 0 1
chr9:38396760|38396916 hsa-miR-221-5p 0 0 1
chr9:38396760|38396916 hsa-miR-221-3p 0 0 1
chr9:38396760|38396916 hsa-miR-222-5p 0 0 1
chr9:38396760|38396916 hsa-miR-222-3p 0 0 1
chr9:38396760|38396916 hsa-miR-558 0 0 1
chr9:38396760|38396916 hsa-miR-588 0 0 1
chr9:38396760|38396916 hsa-miR-645 0 1 1
chr9:38396760|38396916 hsa-miR-1323 0 0 1
chr9:38396760|38396916 hsa-miR-887-5p 0 0 1
chr9:38396760|38396916 hsa-miR-887-3p 0 0 1
chr9:38396760|38396916 hsa-miR-548o-3p 0 0 1
chr9:38396760|38396916 hsa-miR-548o 0 0 1
chr9:38396760|38396916 hsa-miR-125a-3p 0 0 1
chr9:38396760|38396916 hsa-miR-491-5p 1 1 1
chr9:38396760|38396916 hsa-miR-330-3p 0 0 1
chr9:38396760|38396916 hsa-miR-658 1 1 0
chr9:38396760|38396916 hsa-miR-762 1 0 0
chr9:38396760|38396916 hsa-miR-2110 0 1 0
chr9:38396760|38396916 hsa-miR-2861 1 0 0
chr9:38396760|38396916 hsa-miR-3125 1 1 0
chr9:38396760|38396916 hsa-miR-3138 1 1 0
chr9:38396760|38396916 hsa-miR-3153 1 1 0
chr9:38396760|38396916 hsa-miR-4306 1 0 0
chr9:38396760|38396916 hsa-miR-3916 1 0 0
chr9:38396760|38396916 hsa-miR-4434 1 0 0
chr9:38396760|38396916 hsa-miR-4453 0 1 0
chr9:38396760|38396916 hsa-miR-4462 1 0 0
chr9:38396760|38396916 hsa-miR-4515 1 0 0
chr9:38396760|38396916 hsa-miR-4533 0 1 0
chr9:38396760|38396916 hsa-miR-4537 1 0 0
chr9:38396760|38396916 hsa-miR-4538 1 1 0
chr9:38396760|38396916 hsa-miR-3978 1 0 0
chr9:38396760|38396916 hsa-miR-4644 1 1 0
chr9:38396760|38396916 hsa-miR-4688 1 0 0
chr9:38396760|38396916 hsa-miR-4689 1 0 0
chr9:38396760|38396916 hsa-miR-5739 1 0 0
chr9:38396760|38396916 hsa-miR-6081 1 1 0
chr9:38396760|38396916 hsa-miR-6124 1 0 0
chr9:38396760|38396916 hsa-miR-6863 1 0 0
chr9:38396760|38396916 hsa-miR-8055 0 1 0
chr9:38396760|38396916 hsa-miR-8085 1 0 0
chr9:38396760|38396916 hsa-miR-12118 0 1 0
chr9:38396760|38396916 hsa-miR-671-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6894-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6510-5p 1 1 0
chr9:38396760|38396916 hsa-miR-8071 1 1 0
chr9:38396760|38396916 hsa-miR-766-5p 1 0 0
chr9:38396760|38396916 hsa-miR-7114-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6880-5p 1 1 0
chr9:38396760|38396916 hsa-miR-7847-3p 1 0 0
chr9:38396760|38396916 hsa-miR-4655-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6742-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6798-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6770-5p 1 0 0
chr9:38396760|38396916 hsa-miR-2467-3p 0 1 0
chr9:38396760|38396916 hsa-miR-6874-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6786-5p 1 0 0
chr9:38396760|38396916 hsa-miR-185-5p 1 0 0
chr9:38396760|38396916 hsa-miR-4640-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6771-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6847-5p 1 1 0
chr9:38396760|38396916 hsa-miR-4743-5p 1 0 0
chr9:38396760|38396916 hsa-miR-2681-3p 1 0 0
chr9:38396760|38396916 hsa-miR-4638-3p 1 1 0
chr9:38396760|38396916 hsa-miR-6886-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6828-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6781-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6878-5p 1 1 0
chr9:38396760|38396916 hsa-miR-6792-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6503-3p 1 0 0
chr9:38396760|38396916 hsa-miR-5586-5p 0 1 0
chr9:38396760|38396916 hsa-miR-4763-3p 1 1 0
chr9:38396760|38396916 hsa-miR-1343-5p 1 0 0
chr9:38396760|38396916 hsa-miR-5001-5p 1 1 0
chr9:38396760|38396916 hsa-miR-6743-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6819-5p 1 0 0
chr9:38396760|38396916 hsa-miR-11181-3p 1 0 0
chr9:38396760|38396916 hsa-miR-6722-3p 1 1 0
chr9:38396760|38396916 hsa-miR-3620-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6780b-5p 1 0 0
chr9:38396760|38396916 hsa-miR-1909-3p 1 1 0
chr9:38396760|38396916 hsa-miR-328-5p 1 0 0
chr9:38396760|38396916 hsa-miR-4725-3p 1 0 0
chr9:38396760|38396916 hsa-miR-4726-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6795-5p 1 0 0
chr9:38396760|38396916 hsa-miR-939-5p 1 0 0
chr9:38396760|38396916 hsa-miR-4758-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6511a-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6856-5p 1 0 0
chr9:38396760|38396916 hsa-miR-4747-5p 1 0 0
chr9:38396760|38396916 hsa-miR-3184-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6791-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6762-5p 1 0 0
chr9:38396760|38396916 hsa-miR-6859-5p 0 1 0
chr9:38396760|38396916 hsa-miR-708-5p 1 0 0
chr9:38396760|38396916 hsa-miR-10527-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:38396760|38396916
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MRPPSGQAGCSLGLVQTAPCPPEAPAGCPAQRGSPLSSALLSPRF
Nucleotide Sequence TTGCGCCCTCCTTCTGGCCAAGCTGGATGTAGCCTAGGACTCGTTCAAACTGCTCCTTGTCCACCTGAGGCCCCTGCTGGGTGTCCAGCTCAAAGGGGTTCCCCACTTTCCTCTGCTTTGCTTTCTCCACGGTTC
CircID chr9:38396760|38396916
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLLVHLRPLLGVQLKGVPHFPLLCFLHGS
Nucleotide Sequence CTGCTCCTTGTCCACCTGAGGCCCCTGCTGGGTGTCCAGCTCAAAGGGGTTCCCCACTTTCCTCTGCTTTGCTTTCTCCACGGTTCT
CircID chr9:38396760|38396916
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGE
Nucleotide Sequence CTGGACACCCAGCAGGGGCCTCAGGTGGACAAGGAGCAGTTTGAACGAGTCCTAGGCTACATCCAGCTTGGCCAGAAGGAGGGCGCAAAACTCCTCTGTGGCGGAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab