CircNet

General Information

circRNA Basic Information

CircID	chr9:5732388\|5753238
Strand	+
CircType	exon
Host Gene	ENSG00000107036.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	CAGCTTCATGGAGTTTGGCCACAAGATGTTGTTGACGGAACGTGTGTAGCAGTAAATAACAAGTATCGACTAATGGCATTTGGCTGTGTGAGTGGTTCTGTGCAGGTCTATACAATAGATAACAGCACTGGAGCCATGCTGCTATCTCATAAATTAGAGCTAACAGCAAAACAGTATCCTGACATTTGGAATAAAACAGGAGCTGTTAAATTGATGAGATGGTCTCCTGACAATAGTGTTGTAATAGTGACCTGGGAATACGGAGGCCTTTCTTTATGGAGTGTTTTTGGAGCACAGCTGATTTGTACACTTGGAGGAGATTTTGCATTTCCAGCACCTATCTAGAGAGCAATTGGCCTATACGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:5732388\|5753238
ORF Type	ORF1
Protein Length	91
Nucleotide Length	273
Protein Sequence	MAFGCVSGSVQVYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNSVVIVTWEYGGLSLWSVFGAQLICTLGGDFAFPAPI*
Nucleotide Sequence	ATGGCATTTGGCTGTGTGAGTGGTTCTGTGCAGGTCTATACAATAGATAACAGCACTGGAGCCATGCTGCTATCTCATAAATTAGAGCTAACAGCAAAACAGTATCCTGACATTTGGAATAAAACAGGAGCTGTTAAATTGATGAGATGGTCTCCTGACAATAGTGTTGTAATAGTGACCTGGGAATACGGAGGCCTTTCTTTATGGAGTGTTTTTGGAGCACAGCTGATTTGTACACTTGGAGGAGATTTTGCATTTCCAGCACCTATCTAG

CircID	chr9:5732388\|5753238
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MQNLLQVYKSAVLQKHSIKKGLRIPRSLLQHYCQETISSI*
Nucleotide Sequence	ATGCAAAATCTCCTCCAAGTGTACAAATCAGCTGTGCTCCAAAAACACTCCATAAAGAAAGGCCTCCGTATTCCCAGGTCACTATTACAACACTATTGTCAGGAGACCATCTCATCAATTTAA

CircID	chr9:5732388\|5753238
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MECFWSTADLYTWRRFCISSTYLESNWPIR
Nucleotide Sequence	ATGGAGTGTTTTTGGAGCACAGCTGATTTGTACACTTGGAGGAGATTTTGCATTTCCAGCACCTATCTAGAGAGCAATTGGCCTATACGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr9:5732388\|5753238	MOV10	1	1	0
chr9:5732388\|5753238	ELAVL1	4	6	0
chr9:5732388\|5753238	NCBP3	0	0	1
chr9:5732388\|5753238	CNBP	0	0	1
chr9:5732388\|5753238	PRPF8	0	5	0
chr9:5732388\|5753238	DDX54	0	1	2
chr9:5732388\|5753238	CAPRIN1	0	0	1
chr9:5732388\|5753238	FMR1	1	0	1
chr9:5732388\|5753238	NUDT21	0	1	0
chr9:5732388\|5753238	GPKOW	0	0	1
chr9:5732388\|5753238	CPSF1	0	1	0
chr9:5732388\|5753238	FUS	0	1	0
chr9:5732388\|5753238	SRSF1	0	1	0
chr9:5732388\|5753238	NOP58	1	3	1
chr9:5732388\|5753238	U2AF2	10	10	2
chr9:5732388\|5753238	SRSF9	0	1	0
chr9:5732388\|5753238	ZNF622	0	0	1
chr9:5732388\|5753238	GRWD1	1	0	1
chr9:5732388\|5753238	RBM10	0	2	0
chr9:5732388\|5753238	FIP1L1	0	0	1
chr9:5732388\|5753238	HNRNPC	6	1	0
chr9:5732388\|5753238	HNRNPD	0	1	0
chr9:5732388\|5753238	ACIN1	0	2	0
chr9:5732388\|5753238	ZC3H7B	0	0	1
chr9:5732388\|5753238	HNRNPA1	0	2	0
chr9:5732388\|5753238	LIN28B	1	2	2
chr9:5732388\|5753238	IGF2BP1	0	1	0
chr9:5732388\|5753238	IGF2BP2	1	2	0
chr9:5732388\|5753238	TARDBP	0	9	0
chr9:5732388\|5753238	BUD13	0	2	4
chr9:5732388\|5753238	DDX24	0	0	3
chr9:5732388\|5753238	CSTF2	2	2	0
chr9:5732388\|5753238	RBM22	0	3	0
chr9:5732388\|5753238	PPIG	0	0	1
chr9:5732388\|5753238	UPF1	0	1	0
chr9:5732388\|5753238	AGO2	0	6	0
chr9:5732388\|5753238	AGO1	1	0	0
chr9:5732388\|5753238	EIF4A3	5	3	6
chr9:5732388\|5753238	FBL	1	0	0

CircRNA Information