CircNet

General Information

circRNA Basic Information

CircID	chr9:6278788\|6278963
Strand	+
CircType	exon
Host Gene	ENSG00000233846.2;
Algorism	CIRI2;
Sequence	CATCATACATGCATAGACCTTATTTTCTTGGCCCCACTGCCAGATGCTAGGAGCTTGCATGCCAAAGAAAGCAAAAGGATCCTTGCCAACAATTATTAAGCCTATTAATACTAGTTTGAAGACTGACAGGAAAGATGCTATGTGTCTATACATTGGTTGAGGGAGGTAATTCTCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr9:6278788\|6278963	hsa-miR-31-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-31-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-96-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-96-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-34a-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-34a-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-182-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-182-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-223-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-223-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-449a	0	0	1
chr9:6278788\|6278963	hsa-miR-586	0	0	1
chr9:6278788\|6278963	hsa-miR-622	0	0	1
chr9:6278788\|6278963	hsa-miR-633	0	0	1
chr9:6278788\|6278963	hsa-miR-449b-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-449b-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-1271-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-1271-3p	0	0	1
chr9:6278788\|6278963	hsa-miR-1272	0	0	1
chr9:6278788\|6278963	hsa-miR-1322	0	0	1
chr9:6278788\|6278963	hsa-miR-501-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-34c-5p	0	0	1
chr9:6278788\|6278963	hsa-miR-9	0	0	1
chr9:6278788\|6278963	hsa-miR-940	1	0	0
chr9:6278788\|6278963	hsa-miR-1202	1	0	0
chr9:6278788\|6278963	hsa-miR-3155a	1	0	0
chr9:6278788\|6278963	hsa-miR-3155b	1	0	0
chr9:6278788\|6278963	hsa-miR-1227-5p	0	1	0
chr9:6278788\|6278963	hsa-miR-3151-5p	0	1	0
chr9:6278788\|6278963	hsa-miR-6786-5p	1	0	0
chr9:6278788\|6278963	hsa-miR-194-3p	0	1	0
chr9:6278788\|6278963	hsa-miR-4774-5p	0	1	0
chr9:6278788\|6278963	hsa-miR-1296-3p	0	1	0
chr9:6278788\|6278963	hsa-miR-7152-5p	0	1	0
chr9:6278788\|6278963	hsa-miR-1207-5p	1	0	0
chr9:6278788\|6278963	hsa-miR-4763-3p	1	0	0
chr9:6278788\|6278963	hsa-miR-6756-5p	1	0	0
chr9:6278788\|6278963	hsa-miR-4649-5p	1	0	0
chr9:6278788\|6278963	hsa-miR-6845-5p	0	1	0
chr9:6278788\|6278963	hsa-miR-6511b-5p	1	0	0
chr9:6278788\|6278963	hsa-miR-99b-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:6278788\|6278963
ORF Type	ORF1
Protein Length	38
Nucleotide Length	117
Protein Sequence	MLGACMPKKAKGSLPTIIKPINTSLKTDRKDAMCLYIG
Nucleotide Sequence	ATGCTAGGAGCTTGCATGCCAAAGAAAGCAAAAGGATCCTTGCCAACAATTATTAAGCCTATTAATACTAGTTTGAAGACTGACAGGAAAGATGCTATGTGTCTATACATTGGTTGA

CircID	chr9:6278788\|6278963
ORF Type	ORF2
Protein Length	29
Nucleotide Length	90
Protein Sequence	MLARILLLSLACKLLASGSGAKKIRSMHV
Nucleotide Sequence	TTGTTGGCAAGGATCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTCTATGCATGTATGA

CircID	chr9:6278788\|6278963
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	MYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMM
Nucleotide Sequence	ATGTATAGACACATAGCATCTTTCCTGTCAGTCTTCAAACTAGTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTCTATGCATGTATGATG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information