CircRNA Information

General Information
circRNA Basic Information
CircID chr9:69075142|69075395
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCACCCCCCAGGTTACAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAAATTATAGGCACGAACCACCACGCCCAGCCAATTTTTTAATATTTTTAGTAGAGACGGGATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATACACTTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCAGGCCCCTTTTCTTTCCTTAAATGGGGATCTCCCACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:69075142|69075395 hsa-miR-517-5p 0 0 1
chr9:69075142|69075395 hsa-miR-517a-3p 0 0 1
chr9:69075142|69075395 hsa-miR-517c-3p 0 0 1
chr9:69075142|69075395 hsa-miR-510-5p 0 0 1
chr9:69075142|69075395 hsa-miR-510-3p 0 0 1
chr9:69075142|69075395 hsa-miR-585-5p 0 0 1
chr9:69075142|69075395 hsa-miR-585-3p 0 0 1
chr9:69075142|69075395 hsa-miR-605-5p 0 0 1
chr9:69075142|69075395 hsa-miR-605-3p 0 0 1
chr9:69075142|69075395 hsa-miR-608 0 0 1
chr9:69075142|69075395 hsa-miR-637 0 0 1
chr9:69075142|69075395 hsa-miR-647 0 0 1
chr9:69075142|69075395 hsa-miR-649 0 0 1
chr9:69075142|69075395 hsa-miR-940 0 0 1
chr9:69075142|69075395 hsa-miR-1247-5p 0 0 1
chr9:69075142|69075395 hsa-miR-1247-3p 0 0 1
chr9:69075142|69075395 hsa-miR-1827 0 1 1
chr9:69075142|69075395 hsa-miR-512-5p 0 0 1
chr9:69075142|69075395 hsa-miR-485-5p 0 1 1
chr9:69075142|69075395 hsa-miR-490-3p 0 0 1
chr9:69075142|69075395 hsa-miR-876-3p 0 0 1
chr9:69075142|69075395 hsa-miR-548c-3p 0 0 1
chr9:69075142|69075395 hsa-miR-128 0 0 1
chr9:69075142|69075395 hsa-miR-323-5p 0 0 1
chr9:69075142|69075395 hsa-miR-1268 0 0 1
chr9:69075142|69075395 hsa-miR-24 0 0 1
chr9:69075142|69075395 hsa-miR-638 1 0 0
chr9:69075142|69075395 hsa-miR-665 1 1 0
chr9:69075142|69075395 hsa-miR-1268a 1 1 0
chr9:69075142|69075395 hsa-miR-2861 1 1 0
chr9:69075142|69075395 hsa-miR-544b 0 1 0
chr9:69075142|69075395 hsa-miR-3137 0 1 0
chr9:69075142|69075395 hsa-miR-3147 1 0 0
chr9:69075142|69075395 hsa-miR-3929 0 1 0
chr9:69075142|69075395 hsa-miR-3937 1 0 0
chr9:69075142|69075395 hsa-miR-1268b 1 1 0
chr9:69075142|69075395 hsa-miR-4478 0 1 0
chr9:69075142|69075395 hsa-miR-3689c 0 1 0
chr9:69075142|69075395 hsa-miR-4486 0 1 0
chr9:69075142|69075395 hsa-miR-4492 1 0 0
chr9:69075142|69075395 hsa-miR-4505 1 1 0
chr9:69075142|69075395 hsa-miR-4507 1 0 0
chr9:69075142|69075395 hsa-miR-1587 1 0 0
chr9:69075142|69075395 hsa-miR-4656 1 1 0
chr9:69075142|69075395 hsa-miR-4688 1 0 0
chr9:69075142|69075395 hsa-miR-5693 0 1 0
chr9:69075142|69075395 hsa-miR-5739 1 0 0
chr9:69075142|69075395 hsa-miR-5787 1 1 0
chr9:69075142|69075395 hsa-miR-8073 0 1 0
chr9:69075142|69075395 hsa-miR-12120 1 0 0
chr9:69075142|69075395 hsa-miR-140-5p 0 1 0
chr9:69075142|69075395 hsa-miR-4433a-3p 1 0 0
chr9:69075142|69075395 hsa-miR-6765-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6894-5p 1 0 0
chr9:69075142|69075395 hsa-miR-3934-5p 0 1 0
chr9:69075142|69075395 hsa-miR-6089 1 0 0
chr9:69075142|69075395 hsa-miR-3192-5p 1 1 0
chr9:69075142|69075395 hsa-miR-4695-5p 0 1 0
chr9:69075142|69075395 hsa-miR-6746-5p 1 0 0
chr9:69075142|69075395 hsa-miR-4722-5p 1 1 0
chr9:69075142|69075395 hsa-miR-7160-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6849-3p 0 1 0
chr9:69075142|69075395 hsa-miR-6772-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6805-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6798-5p 1 0 0
chr9:69075142|69075395 hsa-miR-2467-3p 1 0 0
chr9:69075142|69075395 hsa-miR-6821-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6786-5p 1 0 0
chr9:69075142|69075395 hsa-miR-7109-5p 0 1 0
chr9:69075142|69075395 hsa-miR-6514-3p 0 1 0
chr9:69075142|69075395 hsa-miR-6771-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6749-5p 1 0 0
chr9:69075142|69075395 hsa-miR-1180-3p 1 0 0
chr9:69075142|69075395 hsa-miR-6513-3p 0 1 0
chr9:69075142|69075395 hsa-miR-216a-3p 0 1 0
chr9:69075142|69075395 hsa-miR-20b-3p 0 1 0
chr9:69075142|69075395 hsa-miR-3664-3p 0 1 0
chr9:69075142|69075395 hsa-miR-6847-3p 0 1 0
chr9:69075142|69075395 hsa-miR-1207-5p 1 0 0
chr9:69075142|69075395 hsa-miR-1233-5p 1 1 0
chr9:69075142|69075395 hsa-miR-1273h-5p 0 1 0
chr9:69075142|69075395 hsa-miR-3689b-3p 0 1 0
chr9:69075142|69075395 hsa-miR-4763-3p 1 0 0
chr9:69075142|69075395 hsa-miR-6778-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6787-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6893-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6743-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6756-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6803-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6751-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6774-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6779-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6780a-5p 0 1 0
chr9:69075142|69075395 hsa-miR-3620-5p 1 0 0
chr9:69075142|69075395 hsa-miR-10526-3p 0 1 0
chr9:69075142|69075395 hsa-miR-1909-3p 1 0 0
chr9:69075142|69075395 hsa-miR-328-5p 1 0 0
chr9:69075142|69075395 hsa-miR-4649-5p 1 0 0
chr9:69075142|69075395 hsa-miR-4685-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6729-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6846-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6848-5p 1 1 0
chr9:69075142|69075395 hsa-miR-6858-5p 1 0 0
chr9:69075142|69075395 hsa-miR-939-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6762-5p 1 0 0
chr9:69075142|69075395 hsa-miR-6884-5p 0 1 0
chr9:69075142|69075395 hsa-miR-6827-3p 0 1 0
chr9:69075142|69075395 hsa-miR-3622b-3p 0 1 0
chr9:69075142|69075395 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:69075142|69075395
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MTSGDTLASASQSAGITGMSHCARPLFFP
Nucleotide Sequence CTGACCTCAGGTGATACACTTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCAGGCCCCTTTTCTTTCCTTAA
CircID chr9:69075142|69075395
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MAQWLMPVIPALWEAEASVSPEVRSSRPAWPTWQNPVSTKNIKKLAGRGGSCL
Nucleotide Sequence CTGGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAAGTGTATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCGTCTCTACTAAAAATATTAAAAAATTGGCTGGGCGTGGTGGTTCGTGCCTATAA
CircID chr9:69075142|69075395
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MRQVYHLRSGVQDQPGQHGKIPSLLKILKNWLGVVVRAYNFSYSGG
Nucleotide Sequence CTGAGGCAAGTGTATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCGTCTCTACTAAAAATATTAAAAAATTGGCTGGGCGTGGTGGTTCGTGCCTATAATTTCAGCTACTCAGGAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab