CircNet

General Information

circRNA Basic Information

CircID	chr9:82979908\|82980066
Strand	-
CircType	exon
Host Gene	ENSG00000165105.9;
Algorism	CIRI2;
Sequence	CTCAATTTTATCTTCAGCAGGAGGGTTGTGCAACTTGGGTTTATGCAGATCACATCAAGTGTTAAATAATCAAATGTCACATATGTCATATAAAGCAGCAAGTGAAAAAAATAAATTATGAAAATGCATGGGCTAAAAGTTAACAGTGAAAAATATCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr9:82979908\|82980066	hsa-miR-141-5p	0	0	1
chr9:82979908\|82980066	hsa-miR-141-3p	0	0	1
chr9:82979908\|82980066	hsa-miR-200a-5p	0	0	1
chr9:82979908\|82980066	hsa-miR-200a-3p	0	0	1
chr9:82979908\|82980066	hsa-miR-370-5p	0	0	1
chr9:82979908\|82980066	hsa-miR-370-3p	0	0	1
chr9:82979908\|82980066	hsa-miR-425-5p	0	0	1
chr9:82979908\|82980066	hsa-miR-425-3p	0	0	1
chr9:82979908\|82980066	hsa-miR-577	0	0	1
chr9:82979908\|82980066	hsa-miR-586	0	0	1
chr9:82979908\|82980066	hsa-miR-1208	0	0	1
chr9:82979908\|82980066	hsa-miR-542-3p	0	0	1
chr9:82979908\|82980066	hsa-miR-1259	0	0	1
chr9:82979908\|82980066	hsa-miR-3149	0	1	0
chr9:82979908\|82980066	hsa-let-7c-3p	1	1	0
chr9:82979908\|82980066	hsa-miR-4667-3p	0	1	0
chr9:82979908\|82980066	hsa-miR-660-3p	0	1	0
chr9:82979908\|82980066	hsa-miR-208a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:82979908\|82980066
ORF Type	ORF1
Protein Length	31
Nucleotide Length	96
Protein Sequence	MCNLGLCRSHQVLNNQMSHMSYKAASEKNKL
Nucleotide Sequence	TTGTGCAACTTGGGTTTATGCAGATCACATCAAGTGTTAAATAATCAAATGTCACATATGTCATATAAAGCAGCAAGTGAAAAAAATAAATTATGA

CircID	chr9:82979908\|82980066
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MLTFSPCIFIIYFFHLLLYMTYVTFDYLTLDVICINPSCTTLLLKIKL
Nucleotide Sequence	CTGTTAACTTTTAGCCCATGCATTTTCATAATTTATTTTTTTCACTTGCTGCTTTATATGACATATGTGACATTTGATTATTTAACACTTGATGTGATCTGCATAAACCCAAGTTGCACAACCCTCCTGCTGAAGATAAAATTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information