CircRNA Information

General Information
circRNA Basic Information
CircID chr9:86035368|86035551
Strand -
CircType exon
Host Gene ENSG00000135052.15;
Algorism CIRI2;
Sequence CTTCCCCGGCAGCTTCCTGCTCCTCCTCCTGTCCGTCGGGGATGACAAGCTGGTCTCGCTCAGGGCCCTCCATCTCTGGATTTTCCTGGCTCACTGACAGGGCAGCCTGCACCTGTGGGGTCTGGCCCAGTTCTCCGGCTCCCCCGAAGCCTCTTCCACCTACAGGTCTGTCTTCCACCACCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:86035368|86035551 hsa-miR-22-5p 0 0 1
chr9:86035368|86035551 hsa-miR-22-3p 0 0 1
chr9:86035368|86035551 hsa-miR-223-5p 0 0 1
chr9:86035368|86035551 hsa-miR-223-3p 0 0 1
chr9:86035368|86035551 hsa-miR-146a-5p 0 0 1
chr9:86035368|86035551 hsa-miR-146a-3p 0 0 1
chr9:86035368|86035551 hsa-miR-552-5p 0 0 1
chr9:86035368|86035551 hsa-miR-552-3p 0 0 1
chr9:86035368|86035551 hsa-miR-765 1 1 1
chr9:86035368|86035551 hsa-miR-874-5p 0 0 1
chr9:86035368|86035551 hsa-miR-874-3p 0 0 1
chr9:86035368|86035551 hsa-miR-939-5p 0 0 1
chr9:86035368|86035551 hsa-miR-939-3p 0 0 1
chr9:86035368|86035551 hsa-miR-1291 1 1 1
chr9:86035368|86035551 hsa-miR-146b-3p 0 0 1
chr9:86035368|86035551 hsa-miR-339-5p 0 0 1
chr9:86035368|86035551 hsa-miR-525-5p 0 0 1
chr9:86035368|86035551 hsa-miR-520a-5p 0 0 1
chr9:86035368|86035551 hsa-miR-125a-5p 0 0 1
chr9:86035368|86035551 hsa-miR-146b-5p 0 1 1
chr9:86035368|86035551 hsa-miR-125b 0 0 1
chr9:86035368|86035551 hsa-miR-7 0 0 1
chr9:86035368|86035551 hsa-miR-631 0 1 0
chr9:86035368|86035551 hsa-miR-764 0 1 0
chr9:86035368|86035551 hsa-miR-1183 1 0 0
chr9:86035368|86035551 hsa-miR-1275 1 0 0
chr9:86035368|86035551 hsa-miR-3138 1 0 0
chr9:86035368|86035551 hsa-miR-3154 1 0 0
chr9:86035368|86035551 hsa-miR-3174 1 1 0
chr9:86035368|86035551 hsa-miR-3188 1 1 0
chr9:86035368|86035551 hsa-miR-4298 0 1 0
chr9:86035368|86035551 hsa-miR-4319 0 1 0
chr9:86035368|86035551 hsa-miR-4533 1 0 0
chr9:86035368|86035551 hsa-miR-4675 1 0 0
chr9:86035368|86035551 hsa-miR-4734 1 0 0
chr9:86035368|86035551 hsa-miR-4739 1 0 0
chr9:86035368|86035551 hsa-miR-5090 1 0 0
chr9:86035368|86035551 hsa-miR-5698 0 1 0
chr9:86035368|86035551 hsa-miR-6081 1 1 0
chr9:86035368|86035551 hsa-miR-6085 1 1 0
chr9:86035368|86035551 hsa-miR-6090 1 0 0
chr9:86035368|86035551 hsa-miR-6124 1 0 0
chr9:86035368|86035551 hsa-miR-6125 1 0 0
chr9:86035368|86035551 hsa-miR-6165 1 1 0
chr9:86035368|86035551 hsa-miR-6745 1 1 0
chr9:86035368|86035551 hsa-miR-6860 1 0 0
chr9:86035368|86035551 hsa-miR-8085 1 0 0
chr9:86035368|86035551 hsa-miR-1843 0 1 0
chr9:86035368|86035551 hsa-miR-12118 1 1 0
chr9:86035368|86035551 hsa-miR-4433a-3p 1 0 0
chr9:86035368|86035551 hsa-miR-6765-5p 1 0 0
chr9:86035368|86035551 hsa-miR-7106-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6894-5p 1 0 0
chr9:86035368|86035551 hsa-miR-125a-3p 1 0 0
chr9:86035368|86035551 hsa-miR-6799-5p 1 0 0
chr9:86035368|86035551 hsa-miR-8071 1 0 0
chr9:86035368|86035551 hsa-miR-6833-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4768-3p 0 1 0
chr9:86035368|86035551 hsa-miR-6089 1 0 0
chr9:86035368|86035551 hsa-miR-6807-5p 1 1 0
chr9:86035368|86035551 hsa-miR-6757-5p 0 1 0
chr9:86035368|86035551 hsa-miR-6880-5p 1 0 0
chr9:86035368|86035551 hsa-miR-7847-3p 1 0 0
chr9:86035368|86035551 hsa-miR-4695-5p 1 1 0
chr9:86035368|86035551 hsa-miR-7154-3p 1 0 0
chr9:86035368|86035551 hsa-miR-6727-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6721-5p 1 0 0
chr9:86035368|86035551 hsa-miR-3180-3p 1 0 0
chr9:86035368|86035551 hsa-miR-6748-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6732-5p 1 0 0
chr9:86035368|86035551 hsa-miR-3190-3p 1 1 0
chr9:86035368|86035551 hsa-miR-6827-5p 1 1 0
chr9:86035368|86035551 hsa-miR-6798-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6874-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6786-5p 1 0 0
chr9:86035368|86035551 hsa-miR-7109-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4640-5p 1 1 0
chr9:86035368|86035551 hsa-miR-4756-3p 0 1 0
chr9:86035368|86035551 hsa-miR-92b-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4787-5p 1 0 0
chr9:86035368|86035551 hsa-miR-937-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6824-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6802-5p 0 1 0
chr9:86035368|86035551 hsa-miR-6781-5p 1 1 0
chr9:86035368|86035551 hsa-miR-7160-3p 0 1 0
chr9:86035368|86035551 hsa-miR-483-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4763-3p 1 0 0
chr9:86035368|86035551 hsa-miR-6769b-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6778-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6787-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6816-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6865-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6870-5p 1 1 0
chr9:86035368|86035551 hsa-miR-1343-5p 1 0 0
chr9:86035368|86035551 hsa-miR-5001-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6726-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6756-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6803-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6813-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6815-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6851-5p 1 0 0
chr9:86035368|86035551 hsa-miR-11181-3p 1 1 0
chr9:86035368|86035551 hsa-miR-1249-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6797-5p 1 0 0
chr9:86035368|86035551 hsa-miR-7111-5p 1 1 0
chr9:86035368|86035551 hsa-miR-5196-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6836-5p 1 0 0
chr9:86035368|86035551 hsa-miR-10396b-5p 1 0 0
chr9:86035368|86035551 hsa-miR-1237-5p 1 0 0
chr9:86035368|86035551 hsa-miR-328-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4649-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4726-5p 1 1 0
chr9:86035368|86035551 hsa-miR-6729-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6795-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6858-5p 1 1 0
chr9:86035368|86035551 hsa-miR-4723-5p 1 1 0
chr9:86035368|86035551 hsa-miR-6885-5p 1 1 0
chr9:86035368|86035551 hsa-miR-6511b-5p 0 1 0
chr9:86035368|86035551 hsa-miR-10396b-3p 1 0 0
chr9:86035368|86035551 hsa-miR-10398-3p 1 1 0
chr9:86035368|86035551 hsa-miR-6766-5p 1 0 0
chr9:86035368|86035551 hsa-miR-4667-5p 1 0 0
chr9:86035368|86035551 hsa-miR-6811-5p 0 1 0
chr9:86035368|86035551 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:86035368|86035551
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MDFPGSLTGQPAPVGSGPVLRLPRSLFHLQVCLPPP
Nucleotide Sequence CTGGATTTTCCTGGCTCACTGACAGGGCAGCCTGCACCTGTGGGGTCTGGCCCAGTTCTCCGGCTCCCCCGAAGCCTCTTCCACCTACAGGTCTGTCTTCCACCACCT
CircID chr9:86035368|86035551
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MLLLLSVGDDKLVSLRALHLWIFLAH
Nucleotide Sequence CTGCTCCTCCTCCTGTCCGTCGGGGATGACAAGCTGGTCTCGCTCAGGGCCCTCCATCTCTGGATTTTCCTGGCTCACTGA
CircID chr9:86035368|86035551
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MHLWGLAQFSGSPEASSTYRSVFHHL
Nucleotide Sequence CTGCACCTGTGGGGTCTGGCCCAGTTCTCCGGCTCCCCCGAAGCCTCTTCCACCTACAGGTCTGTCTTCCACCACCTG
CircID chr9:86035368|86035551
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MTSWSRSGPSISGFSWLTDRAACTCGVWPSSPAPPKPLPPTGLSSTT
Nucleotide Sequence ATGACAAGCTGGTCTCGCTCAGGGCCCTCCATCTCTGGATTTTCCTGGCTCACTGACAGGGCAGCCTGCACCTGTGGGGTCTGGCCCAGTTCTCCGGCTCCCCCGAAGCCTCTTCCACCTACAGGTCTGTCTTCCACCACC
CircID chr9:86035368|86035551
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MGQTPQVQAALSVSQENPEMEGPERDQLVIPDGQEEEQEAAGE
Nucleotide Sequence CTGGGCCAGACCCCACAGGTGCAGGCTGCCCTGTCAGTGAGCCAGGAAAATCCAGAGATGGAGGGCCCTGAGCGAGACCAGCTTGTCATCCCCGACGGACAGGAGGAGGAGCAGGAAGCTGCCGGGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab