CircRNA Information

General Information
circRNA Basic Information
CircID chr9:86077565|86079333
Strand -
CircType exon
Host Gene ENSG00000135052.15;
Algorism CIRI2;
Sequence CCTGCCTTCCAGCTCCATGATCCGTGTCTGGAGGTCCACGCTCCGGGAGCTCGCAATCCAGTAGTTGAAGCCCAAGACGATGATGCAGGCCACCAGGGCGGCCAGCACGAGGGGCGGCGACTTCATGCTGCGACGCCCGTTTCCCAAGCCCATCATCTCAAAATCAGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:86077565|86079333 hsa-miR-107 0 0 1
chr9:86077565|86079333 hsa-miR-143-5p 0 0 1
chr9:86077565|86079333 hsa-miR-143-3p 0 0 1
chr9:86077565|86079333 hsa-miR-492 0 0 1
chr9:86077565|86079333 hsa-miR-606 0 0 1
chr9:86077565|86079333 hsa-miR-635 0 0 1
chr9:86077565|86079333 hsa-miR-940 0 0 1
chr9:86077565|86079333 hsa-miR-1203 0 1 1
chr9:86077565|86079333 hsa-miR-1243 0 0 1
chr9:86077565|86079333 hsa-miR-490-5p 0 0 1
chr9:86077565|86079333 hsa-miR-103 0 0 1
chr9:86077565|86079333 hsa-miR-602 1 0 0
chr9:86077565|86079333 hsa-miR-762 1 0 0
chr9:86077565|86079333 hsa-miR-1181 0 1 0
chr9:86077565|86079333 hsa-miR-4322 1 0 0
chr9:86077565|86079333 hsa-miR-4265 1 0 0
chr9:86077565|86079333 hsa-miR-3911 1 0 0
chr9:86077565|86079333 hsa-miR-4456 0 1 0
chr9:86077565|86079333 hsa-miR-4462 1 1 0
chr9:86077565|86079333 hsa-miR-1587 1 0 0
chr9:86077565|86079333 hsa-miR-4658 1 0 0
chr9:86077565|86079333 hsa-miR-4673 1 0 0
chr9:86077565|86079333 hsa-miR-4674 1 0 0
chr9:86077565|86079333 hsa-miR-4767 1 0 0
chr9:86077565|86079333 hsa-miR-5192 1 0 0
chr9:86077565|86079333 hsa-miR-6088 0 1 0
chr9:86077565|86079333 hsa-miR-378j 0 1 0
chr9:86077565|86079333 hsa-miR-9899 1 0 0
chr9:86077565|86079333 hsa-miR-12115 0 1 0
chr9:86077565|86079333 hsa-miR-136-3p 0 1 0
chr9:86077565|86079333 hsa-miR-27a-5p 1 0 0
chr9:86077565|86079333 hsa-miR-28-3p 1 1 0
chr9:86077565|86079333 hsa-miR-1292-5p 1 1 0
chr9:86077565|86079333 hsa-miR-4655-3p 0 1 0
chr9:86077565|86079333 hsa-miR-6874-5p 0 1 0
chr9:86077565|86079333 hsa-miR-2681-3p 0 1 0
chr9:86077565|86079333 hsa-miR-6743-3p 0 1 0
chr9:86077565|86079333 hsa-miR-3158-3p 1 0 0
chr9:86077565|86079333 hsa-miR-4632-3p 0 1 0
chr9:86077565|86079333 hsa-miR-4749-3p 0 1 0
chr9:86077565|86079333 hsa-miR-6795-3p 0 1 0
chr9:86077565|86079333 hsa-miR-1207-5p 1 0 0
chr9:86077565|86079333 hsa-miR-6775-5p 1 0 0
chr9:86077565|86079333 hsa-miR-6774-5p 1 0 0
chr9:86077565|86079333 hsa-miR-3620-5p 1 0 0
chr9:86077565|86079333 hsa-miR-10392-5p 1 0 0
chr9:86077565|86079333 hsa-miR-6790-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:86077565|86079333
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MEVHAPGARNPVVEAQDDDAGHQGGQHEGRRLHAATPVSQAHHLKIS
Nucleotide Sequence CTGGAGGTCCACGCTCCGGGAGCTCGCAATCCAGTAGTTGAAGCCCAAGACGATGATGCAGGCCACCAGGGCGGCCAGCACGAGGGGCGGCGACTTCATGCTGCGACGCCCGTTTCCCAAGCCCATCATCTCAAAATCAGC

CircID chr9:86077565|86079333
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MKPKTMMQATRAASTRGGDFMLRRPFPKPIISKSA
Nucleotide Sequence TTGAAGCCCAAGACGATGATGCAGGCCACCAGGGCGGCCAGCACGAGGGGCGGCGACTTCATGCTGCGACGCCCGTTTCCCAAGCCCATCATCTCAAAATCAGCG

CircID chr9:86077565|86079333
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MHHRLGLQLLDCELPERGPPDTDHGAGRQ
Nucleotide Sequence CTGCATCATCGTCTTGGGCTTCAACTACTGGATTGCGAGCTCCCGGAGCGTGGACCTCCAGACACGGATCATGGAGCTGGAAGGCAG

CircID chr9:86077565|86079333
ORF Type ORF4
Protein Length 52
Nucleotide Length 156
Protein Sequence MMGLGNGRRSMKSPPLVLAALVACIIVLGFNYWIASSRSVDLQTRIMELEGR
Nucleotide Sequence ATGATGGGCTTGGGAAACGGGCGTCGCAGCATGAAGTCGCCGCCCCTCGTGCTGGCCGCCCTGGTGGCCTGCATCATCGTCTTGGGCTTCAACTACTGGATTGCGAGCTCCCGGAGCGTGGACCTCCAGACACGGATCATGGAGCTGGAAGGCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites