CircNet

General Information

circRNA Basic Information

CircID	chr9:87647305\|87681626
Strand	+
CircType	exon
Host Gene	ENSG00000196730.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGCGGGTCCAATGCCGTCTACTGGGCTGCTCGGCATGGCCACGTCGATACCTTGAAATTTCTCAGTGAGAACAAATGCCCTTTGGATGTGAAAGACAAGGATACGCACCGAGGACTCTTCATCCAGCAGCTCCGACCCACACAGAACCTGCAGCCAAGAATTAAGCTCAAGCTGTTTGGCCACTCGGGATCCGGGAAAACCACCCTTGTAGAATCTCTCAAGTGTGGGCTGCTGAGGAGCTTTTTCAGAAGGCGTCGGCCCAGACTGTCTTCCACCAACTCCAGCAGGTTCCCACCTTCACCCCTGGCTTCTAAGCCCACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr9:87647305\|87681626	hsa-miR-134-3p	1	1
chr9:87647305\|87681626	hsa-miR-92a-2-5p	1	1
chr9:87647305\|87681626	hsa-miR-27a-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr9:87647305\|87681626
ORF Type	ORF1
Protein Length	101
Nucleotide Length	303
Protein Sequence	VGLEARGEGGNLLELVEDSLGRRLLKKLLSSPHLRDSTRVVFPDPEWPNSLSLILGCRFCVGRSCWMKSPRCVSLSFTSKGHLFSLRNFKVSTWPCRAAQ*
Nucleotide Sequence	GTGGGCTTAGAAGCCAGGGGTGAAGGTGGGAACCTGCTGGAGTTGGTGGAAGACAGTCTGGGCCGACGCCTTCTGAAAAAGCTCCTCAGCAGCCCACACTTGAGAGATTCTACAAGGGTGGTTTTCCCGGATCCCGAGTGGCCAAACAGCTTGAGCTTAATTCTTGGCTGCAGGTTCTGTGTGGGTCGGAGCTGCTGGATGAAGAGTCCTCGGTGCGTATCCTTGTCTTTCACATCCAAAGGGCATTTGTTCTCACTGAGAAATTTCAAGGTATCGACGTGGCCATGCCGAGCAGCCCAGTAG

CircID	chr9:87647305\|87681626
ORF Type	ORF2
Protein Length	90
Nucleotide Length	270
Protein Sequence	LKFLSENKCPLDVKDKDTHRGLFIQQLRPTQNLQPRIKLKLFGHSGSGKTTLVESLKCGLLRSFFRRRRPRLSSTNSSRFPPSPLASKPT
Nucleotide Sequence	TTGAAATTTCTCAGTGAGAACAAATGCCCTTTGGATGTGAAAGACAAGGATACGCACCGAGGACTCTTCATCCAGCAGCTCCGACCCACACAGAACCTGCAGCCAAGAATTAAGCTCAAGCTGTTTGGCCACTCGGGATCCGGGAAAACCACCCTTGTAGAATCTCTCAAGTGTGGGCTGCTGAGGAGCTTTTTCAGAAGGCGTCGGCCCAGACTGTCTTCCACCAACTCCAGCAGGTTCCCACCTTCACCCCTGGCTTCTAAGCCCACA

CircID	chr9:87647305\|87681626
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MPFGCERQGYAPRTLHPAAPTHTEPAAKN*
Nucleotide Sequence	ATGCCCTTTGGATGTGAAAGACAAGGATACGCACCGAGGACTCTTCATCCAGCAGCTCCGACCCACACAGAACCTGCAGCCAAGAATTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr9:87647305\|87681626	NOP56	0	1	0
chr9:87647305\|87681626	ELAVL1	0	2	2
chr9:87647305\|87681626	SF3B4	2	0	0
chr9:87647305\|87681626	CNBP	0	1	0
chr9:87647305\|87681626	UPF1	2	0	0
chr9:87647305\|87681626	TAF15	0	1	0
chr9:87647305\|87681626	FMR1	4	0	3
chr9:87647305\|87681626	FUS	2	5	0
chr9:87647305\|87681626	DGCR8	1	0	0
chr9:87647305\|87681626	SRSF1	0	1	0
chr9:87647305\|87681626	NOP58	0	1	3
chr9:87647305\|87681626	SRSF3	1	0	0
chr9:87647305\|87681626	U2AF1	2	0	0
chr9:87647305\|87681626	U2AF2	7	0	0
chr9:87647305\|87681626	RBM10	4	1	0
chr9:87647305\|87681626	DHX9	1	0	0
chr9:87647305\|87681626	FXR2	2	0	1
chr9:87647305\|87681626	IGF2BP1	3	0	1
chr9:87647305\|87681626	IGF2BP3	1	0	1
chr9:87647305\|87681626	IGF2BP2	4	0	2
chr9:87647305\|87681626	FTO	1	0	0
chr9:87647305\|87681626	TARDBP	0	1	0
chr9:87647305\|87681626	BUD13	0	1	1
chr9:87647305\|87681626	PRPF8	0	3	0
chr9:87647305\|87681626	CSTF2T	1	1	0
chr9:87647305\|87681626	FBL	1	1	2
chr9:87647305\|87681626	EIF4A3	4	6	4
chr9:87647305\|87681626	AGO2	1	1	0

CircRNA Information