CircRNA Information

General Information
circRNA Basic Information
CircID chr9:89013277|89013536
Strand +
CircType exon
Host Gene ENSG00000148082.8;
Algorism CIRI2;
Sequence CTCATCAACCACCACCTAGAAAGCAGCCTGCCCATTGTCTCTGCAGGGAGTGAGCTGTGTCTCCAGCAGCCAGTGGAGAGGAAGCAGTGACCTGGCCAGCACTGCTCCCAGCACTGCGCACCAGGTCAGGAGGACCTGGAGTGGACTAGAATCGGGGCTGCTGGAACTGGGACAGCTGCCTGTGGCTCAGAGCCTTCTTCAAAAGCTTCAAAAGGAAGGCTTCCTTTAAGGTCAAGTTTCATAAACTTGGTTCTGAATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:89013277|89013536 hsa-miR-192-5p 0 0 1
chr9:89013277|89013536 hsa-miR-192-3p 0 0 1
chr9:89013277|89013536 hsa-miR-215-5p 0 0 1
chr9:89013277|89013536 hsa-miR-215-3p 0 0 1
chr9:89013277|89013536 hsa-miR-554 0 0 1
chr9:89013277|89013536 hsa-miR-563 0 0 1
chr9:89013277|89013536 hsa-miR-604 0 0 1
chr9:89013277|89013536 hsa-miR-631 0 0 1
chr9:89013277|89013536 hsa-miR-647 0 0 1
chr9:89013277|89013536 hsa-miR-675-5p 0 0 1
chr9:89013277|89013536 hsa-miR-675-3p 0 0 1
chr9:89013277|89013536 hsa-miR-892b 0 0 1
chr9:89013277|89013536 hsa-miR-760 0 1 1
chr9:89013277|89013536 hsa-miR-920 0 0 1
chr9:89013277|89013536 hsa-miR-933 0 0 1
chr9:89013277|89013536 hsa-miR-1287-5p 0 0 1
chr9:89013277|89013536 hsa-miR-1287-3p 0 0 1
chr9:89013277|89013536 hsa-miR-127-5p 1 1 1
chr9:89013277|89013536 hsa-miR-671-5p 0 0 1
chr9:89013277|89013536 hsa-miR-512-3p 0 0 1
chr9:89013277|89013536 hsa-miR-508-5p 0 0 1
chr9:89013277|89013536 hsa-miR-876-3p 0 0 1
chr9:89013277|89013536 hsa-miR-338-3p 0 0 1
chr9:89013277|89013536 hsa-miR-483-3p 0 0 1
chr9:89013277|89013536 hsa-miR-516a-3p 0 1 1
chr9:89013277|89013536 hsa-miR-323-5p 0 0 1
chr9:89013277|89013536 hsa-miR-602 1 0 0
chr9:89013277|89013536 hsa-miR-298 1 0 0
chr9:89013277|89013536 hsa-miR-1295a 1 0 0
chr9:89013277|89013536 hsa-miR-3185 0 1 0
chr9:89013277|89013536 hsa-miR-3921 0 1 0
chr9:89013277|89013536 hsa-miR-3937 0 1 0
chr9:89013277|89013536 hsa-miR-4519 0 1 0
chr9:89013277|89013536 hsa-miR-4689 1 0 0
chr9:89013277|89013536 hsa-miR-4692 0 1 0
chr9:89013277|89013536 hsa-miR-4706 1 0 0
chr9:89013277|89013536 hsa-miR-6081 1 1 0
chr9:89013277|89013536 hsa-miR-6860 1 0 0
chr9:89013277|89013536 hsa-miR-8089 1 0 0
chr9:89013277|89013536 hsa-miR-4687-3p 1 0 0
chr9:89013277|89013536 hsa-miR-6892-3p 1 0 0
chr9:89013277|89013536 hsa-miR-25-5p 1 0 0
chr9:89013277|89013536 hsa-miR-3692-5p 0 1 0
chr9:89013277|89013536 hsa-miR-139-3p 1 0 0
chr9:89013277|89013536 hsa-miR-3064-5p 0 1 0
chr9:89013277|89013536 hsa-miR-6762-3p 0 1 0
chr9:89013277|89013536 hsa-miR-6721-5p 1 1 0
chr9:89013277|89013536 hsa-miR-7110-3p 1 0 0
chr9:89013277|89013536 hsa-miR-7845-5p 1 0 0
chr9:89013277|89013536 hsa-miR-6829-5p 1 0 0
chr9:89013277|89013536 hsa-miR-2467-3p 1 0 0
chr9:89013277|89013536 hsa-miR-6882-3p 1 0 0
chr9:89013277|89013536 hsa-miR-1228-5p 1 0 0
chr9:89013277|89013536 hsa-miR-3667-3p 0 1 0
chr9:89013277|89013536 hsa-miR-6802-5p 0 1 0
chr9:89013277|89013536 hsa-miR-3158-5p 0 1 0
chr9:89013277|89013536 hsa-miR-584-3p 0 1 0
chr9:89013277|89013536 hsa-miR-671-3p 0 1 0
chr9:89013277|89013536 hsa-miR-4524a-3p 1 0 0
chr9:89013277|89013536 hsa-miR-550b-3p 0 1 0
chr9:89013277|89013536 hsa-miR-1207-5p 1 0 0
chr9:89013277|89013536 hsa-miR-4763-3p 1 0 0
chr9:89013277|89013536 hsa-miR-6879-5p 1 0 0
chr9:89013277|89013536 hsa-miR-892c-3p 0 1 0
chr9:89013277|89013536 hsa-miR-6836-5p 1 0 0
chr9:89013277|89013536 hsa-miR-4726-5p 1 0 0
chr9:89013277|89013536 hsa-miR-6856-5p 1 0 0
chr9:89013277|89013536 hsa-miR-1199-5p 1 1 0
chr9:89013277|89013536 hsa-miR-6785-5p 1 0 0
chr9:89013277|89013536 hsa-miR-6791-5p 1 0 0
chr9:89013277|89013536 hsa-miR-3059-5p 0 1 0
chr9:89013277|89013536 hsa-miR-3085-3p 0 1 0
chr9:89013277|89013536 hsa-miR-370-5p 0 1 0
chr9:89013277|89013536 hsa-miR-4676-3p 1 1 0
chr9:89013277|89013536 hsa-miR-7162-5p 0 1 0
chr9:89013277|89013536 hsa-miR-4653-5p 0 1 0
chr9:89013277|89013536 hsa-miR-516b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:89013277|89013536
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MEWTRIGAAGTGTAACGSEPSSKASKGRLPLRSSFINLVLN
Nucleotide Sequence CTGGAGTGGACTAGAATCGGGGCTGCTGGAACTGGGACAGCTGCCTGTGGCTCAGAGCCTTCTTCAAAAGCTTCAAAAGGAAGGCTTCCTTTAAGGTCAAGTTTCATAAACTTGGTTCTGAAT
CircID chr9:89013277|89013536
ORF Type ORF2
Protein Length 64
Nucleotide Length 195
Protein Sequence MSLQGVSCVSSSQWRGSSDLASTAPSTAHQVRRTWSGLESGLLELGQLPVAQSLLQKLQKEGFL
Nucleotide Sequence TTGTCTCTGCAGGGAGTGAGCTGTGTCTCCAGCAGCCAGTGGAGAGGAAGCAGTGACCTGGCCAGCACTGCTCCCAGCACTGCGCACCAGGTCAGGAGGACCTGGAGTGGACTAGAATCGGGGCTGCTGGAACTGGGACAGCTGCCTGTGGCTCAGAGCCTTCTTCAAAAGCTTCAAAAGGAAGGCTTCCTTTAA
CircID chr9:89013277|89013536
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MWLRAFFKSFKRKASFKVKFHKLGSEF
Nucleotide Sequence CTGTGGCTCAGAGCCTTCTTCAAAAGCTTCAAAAGGAAGGCTTCCTTTAAGGTCAAGTTTCATAAACTTGGTTCTGAATTT
CircID chr9:89013277|89013536
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MKLDLKGSLPFEAFEEGSEPQAAVPVPAAPILVHSRSS
Nucleotide Sequence ATGAAACTTGACCTTAAAGGAAGCCTTCCTTTTGAAGCTTTTGAAGAAGGCTCTGAGCCACAGGCAGCTGTCCCAGTTCCAGCAGCCCCGATTCTAGTCCACTCCAGGTCCTCCTGA
CircID chr9:89013277|89013536
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MTLKEAFLLKLLKKALSHRQLSQFQQPRF
Nucleotide Sequence TTGACCTTAAAGGAAGCCTTCCTTTTGAAGCTTTTGAAGAAGGCTCTGAGCCACAGGCAGCTGTCCCAGTTCCAGCAGCCCCGATTCTAG
CircID chr9:89013277|89013536
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MVRSAGSSAGQVTASSPLAAGDTAHSLQRQWAGCFLGGG
Nucleotide Sequence CTGGTGCGCAGTGCTGGGAGCAGTGCTGGCCAGGTCACTGCTTCCTCTCCACTGGCTGCTGGAGACACAGCTCACTCCCTGCAGAGACAATGGGCAGGCTGCTTTCTAGGTGGTGGTTGA
CircID chr9:89013277|89013536
ORF Type ORF7
Protein Length 37
Nucleotide Length 114
Protein Sequence MTWCAVLGAVLARSLLPLHWLLETQLTPCRDNGQAAF
Nucleotide Sequence CTGACCTGGTGCGCAGTGCTGGGAGCAGTGCTGGCCAGGTCACTGCTTCCTCTCCACTGGCTGCTGGAGACACAGCTCACTCCCTGCAGAGACAATGGGCAGGCTGCTTTCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab