CircRNA Information

General Information
circRNA Basic Information
CircID chr9:91299709|91299862
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGCAAGTTAAACTGAGTCCTTCCCAAGGTCATCCTGAGCTACTACAAGTAGAATGTAATGACTTTGGTTACCGACTCTCAACTCCTCTTCCTTCCTAAAAACCTGTCTAGAGATCATTTATTTCTAGACCTCCTCAACCTACTATCTCTCCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:91299709|91299862 hsa-miR-181c-5p 0 0 1
chr9:91299709|91299862 hsa-miR-181c-3p 0 0 1
chr9:91299709|91299862 hsa-miR-185-5p 0 0 1
chr9:91299709|91299862 hsa-miR-185-3p 0 0 1
chr9:91299709|91299862 hsa-miR-181d-5p 0 0 1
chr9:91299709|91299862 hsa-miR-181d-3p 0 0 1
chr9:91299709|91299862 hsa-miR-601 0 0 1
chr9:91299709|91299862 hsa-miR-620 0 0 1
chr9:91299709|91299862 hsa-miR-651-5p 0 0 1
chr9:91299709|91299862 hsa-miR-651-3p 0 0 1
chr9:91299709|91299862 hsa-miR-1251-5p 0 0 1
chr9:91299709|91299862 hsa-miR-1251-3p 0 0 1
chr9:91299709|91299862 hsa-miR-1270 0 0 1
chr9:91299709|91299862 hsa-miR-1252-5p 0 0 1
chr9:91299709|91299862 hsa-miR-1252-3p 0 0 1
chr9:91299709|91299862 hsa-miR-1224-5p 0 0 1
chr9:91299709|91299862 hsa-miR-181a 0 0 1
chr9:91299709|91299862 hsa-miR-181b 0 0 1
chr9:91299709|91299862 hsa-miR-219-1-3p 0 0 1
chr9:91299709|91299862 hsa-miR-3154 1 1 0
chr9:91299709|91299862 hsa-miR-4476 0 1 0
chr9:91299709|91299862 hsa-miR-2392 1 0 0
chr9:91299709|91299862 hsa-miR-4534 1 0 0
chr9:91299709|91299862 hsa-miR-4739 1 1 0
chr9:91299709|91299862 hsa-miR-4748 1 0 0
chr9:91299709|91299862 hsa-miR-5572 1 0 0
chr9:91299709|91299862 hsa-miR-5739 1 0 0
chr9:91299709|91299862 hsa-miR-6127 1 0 0
chr9:91299709|91299862 hsa-miR-6133 1 0 0
chr9:91299709|91299862 hsa-miR-8085 1 0 0
chr9:91299709|91299862 hsa-miR-9500 1 0 0
chr9:91299709|91299862 hsa-miR-12114 1 0 0
chr9:91299709|91299862 hsa-miR-12131 1 0 0
chr9:91299709|91299862 hsa-miR-3150a-3p 1 0 0
chr9:91299709|91299862 hsa-miR-7106-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6894-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6854-5p 0 1 0
chr9:91299709|91299862 hsa-miR-6728-5p 1 0 0
chr9:91299709|91299862 hsa-miR-5187-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6744-5p 0 1 0
chr9:91299709|91299862 hsa-miR-4709-3p 1 0 0
chr9:91299709|91299862 hsa-miR-197-5p 1 0 0
chr9:91299709|91299862 hsa-miR-7845-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6740-5p 1 0 0
chr9:91299709|91299862 hsa-miR-1229-5p 1 0 0
chr9:91299709|91299862 hsa-let-7d-5p 1 1 0
chr9:91299709|91299862 hsa-let-7b-5p 1 1 0
chr9:91299709|91299862 hsa-miR-3202 1 1 0
chr9:91299709|91299862 hsa-miR-6824-5p 1 0 0
chr9:91299709|91299862 hsa-miR-3162-5p 1 0 0
chr9:91299709|91299862 hsa-let-7g-5p 0 1 0
chr9:91299709|91299862 hsa-let-7i-5p 0 1 0
chr9:91299709|91299862 hsa-let-7f-5p 0 1 0
chr9:91299709|91299862 hsa-let-7c-5p 1 1 0
chr9:91299709|91299862 hsa-let-7e-5p 0 1 0
chr9:91299709|91299862 hsa-let-7a-5p 1 1 0
chr9:91299709|91299862 hsa-miR-483-5p 1 0 0
chr9:91299709|91299862 hsa-miR-98-5p 0 1 0
chr9:91299709|91299862 hsa-miR-1207-5p 1 0 0
chr9:91299709|91299862 hsa-miR-4763-3p 1 0 0
chr9:91299709|91299862 hsa-miR-6812-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6870-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6893-5p 1 0 0
chr9:91299709|91299862 hsa-miR-11181-3p 1 0 0
chr9:91299709|91299862 hsa-miR-1249-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6763-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6779-5p 1 1 0
chr9:91299709|91299862 hsa-miR-6780a-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6797-5p 1 1 0
chr9:91299709|91299862 hsa-miR-5196-5p 1 1 0
chr9:91299709|91299862 hsa-miR-4649-5p 1 0 0
chr9:91299709|91299862 hsa-miR-6858-5p 1 1 0
chr9:91299709|91299862 hsa-miR-6831-5p 1 0 0
chr9:91299709|91299862 hsa-miR-939-5p 1 0 0
chr9:91299709|91299862 hsa-miR-4646-5p 1 0 0
chr9:91299709|91299862 hsa-miR-4747-5p 0 1 0
chr9:91299709|91299862 hsa-miR-6876-5p 1 1 0
chr9:91299709|91299862 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:91299709|91299862
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MTLVTDSQLLFLPKNLSRDHLFLDLLNLLSLQ
Nucleotide Sequence ATGACTTTGGTTACCGACTCTCAACTCCTCTTCCTTCCTAAAAACCTGTCTAGAGATCATTTATTTCTAGACCTCCTCAACCTACTATCTCTCCAA
CircID chr9:91299709|91299862
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MSPSQGHPELLQVECNDFGYRLSTPLPS
Nucleotide Sequence CTGAGTCCTTCCCAAGGTCATCCTGAGCTACTACAAGTAGAATGTAATGACTTTGGTTACCGACTCTCAACTCCTCTTCCTTCCTAA
CircID chr9:91299709|91299862
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MISRQVFRKEEELRVGNQSHYILLVVAQDDLGKDSV
Nucleotide Sequence ATGATCTCTAGACAGGTTTTTAGGAAGGAAGAGGAGTTGAGAGTCGGTAACCAAAGTCATTACATTCTACTTGTAGTAGCTCAGGATGACCTTGGGAAGGACTCAGTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab