CircRNA Information

General Information
circRNA Basic Information
CircID chr9:93979330|93979575
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGCACTCTGGAGGCCATCTGGTGATGGTACGGAGGGCAAGTGGGTGCAGCAGGTACAAGGGCTCCCCCAATGCCAGGCCCAATGCAAAGTGGTGTGACAGTCAGTGGAACTCAGCCCCATTAGGTGCAGTCCCTTGGCCGAGGCCCCCAGCTCATTGGCATCAGATCTAGAACAAGGGGTGACCACTGACCAAGTGCTTCCTCGGGATCCCCAGTGACCTGCAGGCTGCTCCTCCTGTTAAGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:93979330|93979575 hsa-miR-33a-5p 0 0 1
chr9:93979330|93979575 hsa-miR-33a-3p 0 0 1
chr9:93979330|93979575 hsa-miR-370-5p 0 0 1
chr9:93979330|93979575 hsa-miR-370-3p 0 0 1
chr9:93979330|93979575 hsa-miR-558 0 0 1
chr9:93979330|93979575 hsa-miR-596 0 0 1
chr9:93979330|93979575 hsa-miR-625-5p 0 0 1
chr9:93979330|93979575 hsa-miR-625-3p 0 0 1
chr9:93979330|93979575 hsa-miR-33b-5p 0 0 1
chr9:93979330|93979575 hsa-miR-33b-3p 0 0 1
chr9:93979330|93979575 hsa-miR-637 1 1 1
chr9:93979330|93979575 hsa-miR-657 0 0 1
chr9:93979330|93979575 hsa-miR-765 0 1 1
chr9:93979330|93979575 hsa-miR-874-5p 0 0 1
chr9:93979330|93979575 hsa-miR-874-3p 0 0 1
chr9:93979330|93979575 hsa-miR-939-5p 0 0 1
chr9:93979330|93979575 hsa-miR-939-3p 0 0 1
chr9:93979330|93979575 hsa-miR-943 0 0 1
chr9:93979330|93979575 hsa-miR-1226-5p 0 0 1
chr9:93979330|93979575 hsa-miR-1226-3p 0 0 1
chr9:93979330|93979575 hsa-miR-1228-5p 0 0 1
chr9:93979330|93979575 hsa-miR-1228-3p 0 0 1
chr9:93979330|93979575 hsa-miR-1205 0 0 1
chr9:93979330|93979575 hsa-miR-1256 0 0 1
chr9:93979330|93979575 hsa-miR-1275 0 0 1
chr9:93979330|93979575 hsa-miR-1288-5p 0 0 1
chr9:93979330|93979575 hsa-miR-1288-3p 0 0 1
chr9:93979330|93979575 hsa-miR-525-5p 0 1 1
chr9:93979330|93979575 hsa-miR-556-5p 0 0 1
chr9:93979330|93979575 hsa-miR-518d-5p 0 0 1
chr9:93979330|93979575 hsa-miR-519b-5p 0 0 1
chr9:93979330|93979575 hsa-miR-519c-5p 0 0 1
chr9:93979330|93979575 hsa-miR-520a-5p 0 0 1
chr9:93979330|93979575 hsa-miR-520c-5p 0 0 1
chr9:93979330|93979575 hsa-miR-1233 0 0 1
chr9:93979330|93979575 hsa-miR-129-3p 0 0 1
chr9:93979330|93979575 hsa-miR-526a 0 0 1
chr9:93979330|93979575 hsa-miR-220a 0 0 1
chr9:93979330|93979575 hsa-miR-638 1 0 0
chr9:93979330|93979575 hsa-miR-663a 1 0 0
chr9:93979330|93979575 hsa-miR-762 1 1 0
chr9:93979330|93979575 hsa-miR-1268a 1 0 0
chr9:93979330|93979575 hsa-miR-1470 0 1 0
chr9:93979330|93979575 hsa-miR-2861 1 1 0
chr9:93979330|93979575 hsa-miR-4281 1 0 0
chr9:93979330|93979575 hsa-miR-3621 1 0 0
chr9:93979330|93979575 hsa-miR-1268b 1 0 0
chr9:93979330|93979575 hsa-miR-4507 1 0 0
chr9:93979330|93979575 hsa-miR-4525 1 0 0
chr9:93979330|93979575 hsa-miR-1587 1 0 0
chr9:93979330|93979575 hsa-miR-4656 1 0 0
chr9:93979330|93979575 hsa-miR-4663 1 0 0
chr9:93979330|93979575 hsa-miR-4682 1 1 0
chr9:93979330|93979575 hsa-miR-4688 1 0 0
chr9:93979330|93979575 hsa-miR-4730 1 0 0
chr9:93979330|93979575 hsa-miR-4734 1 0 0
chr9:93979330|93979575 hsa-miR-4739 1 0 0
chr9:93979330|93979575 hsa-miR-4741 1 0 0
chr9:93979330|93979575 hsa-miR-5698 0 1 0
chr9:93979330|93979575 hsa-miR-5787 1 0 0
chr9:93979330|93979575 hsa-miR-6081 0 1 0
chr9:93979330|93979575 hsa-miR-6085 1 0 0
chr9:93979330|93979575 hsa-miR-7974 1 0 0
chr9:93979330|93979575 hsa-miR-8052 1 1 0
chr9:93979330|93979575 hsa-miR-8073 0 1 0
chr9:93979330|93979575 hsa-miR-8089 1 1 0
chr9:93979330|93979575 hsa-miR-12118 1 0 0
chr9:93979330|93979575 hsa-miR-4731-5p 1 1 0
chr9:93979330|93979575 hsa-miR-7106-5p 1 0 0
chr9:93979330|93979575 hsa-miR-1233-3p 0 1 0
chr9:93979330|93979575 hsa-miR-27a-5p 1 0 0
chr9:93979330|93979575 hsa-miR-1225-3p 1 0 0
chr9:93979330|93979575 hsa-miR-4695-5p 1 0 0
chr9:93979330|93979575 hsa-miR-4722-5p 1 0 0
chr9:93979330|93979575 hsa-miR-7160-5p 1 0 0
chr9:93979330|93979575 hsa-miR-3187-3p 1 0 0
chr9:93979330|93979575 hsa-miR-181a-2-3p 0 1 0
chr9:93979330|93979575 hsa-miR-3180-3p 1 0 0
chr9:93979330|93979575 hsa-miR-185-3p 1 1 0
chr9:93979330|93979575 hsa-miR-4697-3p 0 1 0
chr9:93979330|93979575 hsa-miR-6827-5p 0 1 0
chr9:93979330|93979575 hsa-miR-3130-3p 0 1 0
chr9:93979330|93979575 hsa-miR-6884-3p 0 1 0
chr9:93979330|93979575 hsa-miR-4640-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6749-5p 1 1 0
chr9:93979330|93979575 hsa-miR-6773-3p 0 1 0
chr9:93979330|93979575 hsa-miR-3680-3p 0 1 0
chr9:93979330|93979575 hsa-miR-6780b-3p 0 1 0
chr9:93979330|93979575 hsa-miR-5587-5p 0 1 0
chr9:93979330|93979575 hsa-miR-1343-5p 1 1 0
chr9:93979330|93979575 hsa-miR-5001-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6752-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6756-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6803-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6751-5p 1 0 0
chr9:93979330|93979575 hsa-miR-3620-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6780b-5p 1 0 0
chr9:93979330|93979575 hsa-miR-1237-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6846-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6848-5p 1 0 0
chr9:93979330|93979575 hsa-miR-6858-5p 0 1 0
chr9:93979330|93979575 hsa-miR-4723-5p 1 1 0
chr9:93979330|93979575 hsa-miR-6885-5p 1 0 0
chr9:93979330|93979575 hsa-miR-3199 0 1 0
chr9:93979330|93979575 hsa-miR-4758-5p 1 0 0
chr9:93979330|93979575 hsa-miR-3085-5p 1 0 0
chr9:93979330|93979575 hsa-miR-4700-5p 0 1 0
chr9:93979330|93979575 hsa-miR-4667-5p 0 1 0
chr9:93979330|93979575 hsa-miR-6893-3p 0 1 0
chr9:93979330|93979575 hsa-miR-6511b-3p 1 0 0
chr9:93979330|93979575 hsa-miR-10394-5p 1 1 0
chr9:93979330|93979575 hsa-miR-4676-3p 1 0 0
chr9:93979330|93979575 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr9:93979330|93979575
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAEAPSSLASDLEQGVTTDQVLPRDPQ
Nucleotide Sequence TTGGCCGAGGCCCCCAGCTCATTGGCATCAGATCTAGAACAAGGGGTGACCACTGACCAAGTGCTTCCTCGGGATCCCCAGTGA

CircID chr9:93979330|93979575
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MVMVRRASGCSRYKGSPNARPNAKWCDSQWNSAPLGAVPWPRPPAHWHQI
Nucleotide Sequence CTGGTGATGGTACGGAGGGCAAGTGGGTGCAGCAGGTACAAGGGCTCCCCCAATGCCAGGCCCAATGCAAAGTGGTGTGACAGTCAGTGGAACTCAGCCCCATTAGGTGCAGTCCCTTGGCCGAGGCCCCCAGCTCATTGGCATCAGATCTAG

CircID chr9:93979330|93979575
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MGASAKGLHLMGLSSTDCHTTLHWAWHWGSPCTCCTHLPSVPSPDGLQSA
Nucleotide Sequence CTGGGGGCCTCGGCCAAGGGACTGCACCTAATGGGGCTGAGTTCCACTGACTGTCACACCACTTTGCATTGGGCCTGGCATTGGGGGAGCCCTTGTACCTGCTGCACCCACTTGCCCTCCGTACCATCACCAGATGGCCTCCAGAGTGCT

CircID chr9:93979330|93979575
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MQVTGDPEEALGQWSPLVLDLMPMSWGPRPRDCT
Nucleotide Sequence CTGCAGGTCACTGGGGATCCCGAGGAAGCACTTGGTCAGTGGTCACCCCTTGTTCTAGATCTGATGCCAATGAGCTGGGGGCCTCGGCCAAGGGACTGCACCTAA

CircID chr9:93979330|93979575
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MTVTPLCIGPGIGGALVPAAPTCPPYHHQMASRV
Nucleotide Sequence CTGACTGTCACACCACTTTGCATTGGGCCTGGCATTGGGGGAGCCCTTGTACCTGCTGCACCCACTTGCCCTCCGTACCATCACCAGATGGCCTCCAGAGTG

CircID chr9:93979330|93979575
ORF Type ORF6
Protein Length 33
Nucleotide Length 99
Protein Sequence MSHHFALGLALGEPLYLLHPLALRTITRWPPEC
Nucleotide Sequence CTGTCACACCACTTTGCATTGGGCCTGGCATTGGGGGAGCCCTTGTACCTGCTGCACCCACTTGCCCTCCGTACCATCACCAGATGGCCTCCAGAGTGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites