CircRNA Information

General Information
circRNA Basic Information
CircID chr9:94503283|94503468
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TCTCCCCTGAGTCTCCAGCCTGCTGGACTACCCCATCAGATTTGAACTCGCCAAGCTTCCACAGTCATGTGAGCCAAATCCTTAAAAGTTATCTCTTGGACAGGTGTTGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAAGCAGGAGGACTGCTTGAGCCCAGGAGATCGAGACCAGC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:94503283|94503468 hsa-miR-17-5p 0 0 1
chr9:94503283|94503468 hsa-miR-17-3p 0 0 1
chr9:94503283|94503468 hsa-miR-20a-5p 0 0 1
chr9:94503283|94503468 hsa-miR-20a-3p 0 0 1
chr9:94503283|94503468 hsa-miR-93-5p 0 0 1
chr9:94503283|94503468 hsa-miR-93-3p 0 0 1
chr9:94503283|94503468 hsa-miR-106a-5p 0 0 1
chr9:94503283|94503468 hsa-miR-106a-3p 0 0 1
chr9:94503283|94503468 hsa-miR-214-5p 0 0 1
chr9:94503283|94503468 hsa-miR-214-3p 0 0 1
chr9:94503283|94503468 hsa-miR-150-5p 0 0 1
chr9:94503283|94503468 hsa-miR-150-3p 0 0 1
chr9:94503283|94503468 hsa-miR-106b-5p 0 0 1
chr9:94503283|94503468 hsa-miR-106b-3p 0 0 1
chr9:94503283|94503468 hsa-miR-302a-5p 0 0 1
chr9:94503283|94503468 hsa-miR-302a-3p 0 0 1
chr9:94503283|94503468 hsa-miR-302b-5p 0 0 1
chr9:94503283|94503468 hsa-miR-302b-3p 0 0 1
chr9:94503283|94503468 hsa-miR-302c-5p 0 0 1
chr9:94503283|94503468 hsa-miR-302c-3p 0 0 1
chr9:94503283|94503468 hsa-miR-302d-5p 0 0 1
chr9:94503283|94503468 hsa-miR-302d-3p 0 0 1
chr9:94503283|94503468 hsa-miR-370-5p 0 0 1
chr9:94503283|94503468 hsa-miR-370-3p 0 0 1
chr9:94503283|94503468 hsa-miR-372-5p 0 0 1
chr9:94503283|94503468 hsa-miR-372-3p 0 0 1
chr9:94503283|94503468 hsa-miR-373-5p 0 0 1
chr9:94503283|94503468 hsa-miR-373-3p 0 0 1
chr9:94503283|94503468 hsa-miR-20b-5p 0 0 1
chr9:94503283|94503468 hsa-miR-20b-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520e-5p 0 0 1
chr9:94503283|94503468 hsa-miR-520e-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520b-5p 0 0 1
chr9:94503283|94503468 hsa-miR-520b-3p 0 0 1
chr9:94503283|94503468 hsa-miR-519d-5p 0 0 1
chr9:94503283|94503468 hsa-miR-519d-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520g-5p 0 0 1
chr9:94503283|94503468 hsa-miR-520g-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520h 0 0 1
chr9:94503283|94503468 hsa-miR-510-5p 0 0 1
chr9:94503283|94503468 hsa-miR-510-3p 0 0 1
chr9:94503283|94503468 hsa-miR-552-5p 0 0 1
chr9:94503283|94503468 hsa-miR-552-3p 0 0 1
chr9:94503283|94503468 hsa-miR-607 0 0 1
chr9:94503283|94503468 hsa-miR-943 0 0 1
chr9:94503283|94503468 hsa-miR-1266-5p 0 0 1
chr9:94503283|94503468 hsa-miR-1266-3p 0 0 1
chr9:94503283|94503468 hsa-miR-302e 0 0 1
chr9:94503283|94503468 hsa-miR-671-5p 1 0 1
chr9:94503283|94503468 hsa-miR-512-3p 0 1 1
chr9:94503283|94503468 hsa-miR-338-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520d-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520a-3p 0 0 1
chr9:94503283|94503468 hsa-miR-520c-3p 0 0 1
chr9:94503283|94503468 hsa-miR-24 0 0 1
chr9:94503283|94503468 hsa-miR-608 1 0 0
chr9:94503283|94503468 hsa-miR-761 0 1 0
chr9:94503283|94503468 hsa-miR-665 1 0 0
chr9:94503283|94503468 hsa-miR-760 1 0 0
chr9:94503283|94503468 hsa-miR-3132 1 0 0
chr9:94503283|94503468 hsa-miR-3159 0 1 0
chr9:94503283|94503468 hsa-miR-4274 0 1 0
chr9:94503283|94503468 hsa-miR-4284 0 1 0
chr9:94503283|94503468 hsa-miR-3652 0 1 0
chr9:94503283|94503468 hsa-miR-378g 0 1 0
chr9:94503283|94503468 hsa-miR-4430 0 1 0
chr9:94503283|94503468 hsa-miR-4530 1 1 0
chr9:94503283|94503468 hsa-miR-4538 1 1 0
chr9:94503283|94503468 hsa-miR-4657 1 0 0
chr9:94503283|94503468 hsa-miR-4675 1 0 0
chr9:94503283|94503468 hsa-miR-4734 1 0 0
chr9:94503283|94503468 hsa-miR-6079 1 1 0
chr9:94503283|94503468 hsa-miR-6165 1 0 0
chr9:94503283|94503468 hsa-miR-4687-3p 1 0 0
chr9:94503283|94503468 hsa-miR-6881-3p 0 1 0
chr9:94503283|94503468 hsa-miR-6833-5p 0 1 0
chr9:94503283|94503468 hsa-miR-7114-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6890-5p 1 1 0
chr9:94503283|94503468 hsa-miR-6742-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6796-5p 1 0 0
chr9:94503283|94503468 hsa-miR-3190-3p 0 1 0
chr9:94503283|94503468 hsa-miR-6782-5p 1 0 0
chr9:94503283|94503468 hsa-miR-1343-3p 0 1 0
chr9:94503283|94503468 hsa-miR-6835-5p 1 0 0
chr9:94503283|94503468 hsa-miR-1228-5p 1 0 0
chr9:94503283|94503468 hsa-miR-4690-5p 1 1 0
chr9:94503283|94503468 hsa-miR-1237-3p 0 1 0
chr9:94503283|94503468 hsa-miR-1910-5p 0 1 0
chr9:94503283|94503468 hsa-miR-449b-3p 0 1 0
chr9:94503283|94503468 hsa-miR-5003-5p 0 1 0
chr9:94503283|94503468 hsa-miR-6812-5p 1 0 0
chr9:94503283|94503468 hsa-miR-5001-5p 0 1 0
chr9:94503283|94503468 hsa-miR-6726-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6737-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6756-5p 1 0 0
chr9:94503283|94503468 hsa-miR-10401-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6763-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6738-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6846-5p 1 0 0
chr9:94503283|94503468 hsa-miR-939-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6736-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6790-5p 1 0 0
chr9:94503283|94503468 hsa-miR-6783-3p 0 1 0
chr9:94503283|94503468 hsa-miR-619-5p 1 1 0
chr9:94503283|94503468 hsa-miR-3619-5p 0 1 0
chr9:94503283|94503468 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr9:94503283|94503468
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MWLTPVIPALWEAEAGGLLEPRRSRP
Nucleotide Sequence TTGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAAGCAGGAGGACTGCTTGAGCCCAGGAGATCGAGACCA
CircID chr9:94503283|94503468
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MNSPSFHSHVSQILKSYLLDRCCGSHL
Nucleotide Sequence TTGAACTCGCCAAGCTTCCACAGTCATGTGAGCCAAATCCTTAAAAGTTATCTCTTGGACAGGTGTTGTGGCTCACACCTGTAA
CircID chr9:94503283|94503468
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MGSSSPPASASQSAGITGVSHNTCPRDNF
Nucleotide Sequence CTGGGCTCAAGCAGTCCTCCTGCTTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACAACACCTGTCCAAGAGATAACTTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab