CircRNA Information

General Information
circRNA Basic Information
CircID chr9:96465337|96471094
Strand +
CircType exon
Host Gene ENSG00000130956.13;
Algorism find_circ;CIRI2;DCC;
Sequence ACCAGGTGATAGGTTTGATCGAGACAGACCGTTGAGAGGACGTGGAGGCCCGAGAGGGGGTATGCGCGGCAGAGGCAGAGGTGGCCCTGGGAACAGAGTTTTTGACGCTTTTGACCAGAGAGGAAAGCGAGAATTTGAAAGATATGGTGGGAATGACAAAATAGCAGTCAGAACTGAAGACAACATGGGTGGATGTGGAGTTCGAACCTGGGGATCGGGTAAAGATACCAGTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGTCTCCAGCCAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:96465337|96471094 hsa-miR-143-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr9:96465337|96471094 NOP56 1 1 0
chr9:96465337|96471094 MOV10 0 0 1
chr9:96465337|96471094 ELAVL1 6 2 0
chr9:96465337|96471094 SF3B4 1 0 2
chr9:96465337|96471094 PRPF8 0 0 1
chr9:96465337|96471094 TAF15 2 0 0
chr9:96465337|96471094 FMR1 1 0 3
chr9:96465337|96471094 FUS 1 0 0
chr9:96465337|96471094 DGCR8 1 0 0
chr9:96465337|96471094 SRSF7 0 1 0
chr9:96465337|96471094 SRSF1 0 1 6
chr9:96465337|96471094 NOP58 2 0 0
chr9:96465337|96471094 U2AF1 2 0 3
chr9:96465337|96471094 U2AF2 12 1 6
chr9:96465337|96471094 SRSF9 0 0 1
chr9:96465337|96471094 HNRNPU 1 0 0
chr9:96465337|96471094 DDX54 0 0 2
chr9:96465337|96471094 PCBP2 0 1 0
chr9:96465337|96471094 HNRNPL 0 1 0
chr9:96465337|96471094 PTBP1 1 2 0
chr9:96465337|96471094 HNRNPC 19 23 5
chr9:96465337|96471094 TRA2A 0 0 2
chr9:96465337|96471094 HNRNPA1 2 0 0
chr9:96465337|96471094 RANGAP1 0 0 1
chr9:96465337|96471094 LIN28B 1 0 0
chr9:96465337|96471094 BCCIP 1 0 0
chr9:96465337|96471094 SND1 0 1 0
chr9:96465337|96471094 IGF2BP2 3 3 2
chr9:96465337|96471094 TARDBP 2 3 0
chr9:96465337|96471094 BUD13 0 0 4
chr9:96465337|96471094 EIF4G2 0 0 2
chr9:96465337|96471094 DDX42 0 0 1
chr9:96465337|96471094 FXR2 0 0 1
chr9:96465337|96471094 NONO 0 1 0
chr9:96465337|96471094 ATXN2 0 1 0
chr9:96465337|96471094 EIF4A3 2 1 6
chr9:96465337|96471094 FBL 0 0 2