CircRNA Information

General Information
circRNA Basic Information
CircID chr9:97682200|97685040
Strand -
CircType exon
Host Gene ENSG00000136936.10;
Algorism find_circ;CIRI2;DCC;
Sequence ATTGTGAAGAGGTCTCTTGAAGTTTGGGGTAGTCAAGAAGCATTAGAAGAAGCAAAGGAAGTCCGACAGGAAAACCGAGAAAAAATGAAACAGAAGAAATTTGATAAAAAAGTAAAAGAGGTTGTTCCCGCCTTCCTGAATAGGCCACAAAGGGCTGAGACTGGAGTAGACACTGTAGAGATTAGACACAAGGAGCTTACTGTGCAGTTTTCTCAGAAGGCTCAGAACAGAGAGGAATAAAAGCAAGTCTAAAAGTATTTTAGTTGAAAAGAAATTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACAAAGAAGCTGACACAGTTTACTTCTTTATGGGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:97682200|97685040 hsa-miR-24-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr9:97682200|97685040 RBM5 0 1 0
chr9:97682200|97685040 NOP56 2 1 0
chr9:97682200|97685040 ELAVL1 0 6 3
chr9:97682200|97685040 SF3B1 1 0 0
chr9:97682200|97685040 CPSF7 0 1 0
chr9:97682200|97685040 CPSF6 0 0 1
chr9:97682200|97685040 NUDT21 0 0 1
chr9:97682200|97685040 CPSF3 1 0 0
chr9:97682200|97685040 FUS 1 2 0
chr9:97682200|97685040 DGCR8 1 0 0
chr9:97682200|97685040 SRSF1 0 0 2
chr9:97682200|97685040 NOP58 3 1 3
chr9:97682200|97685040 SRSF3 1 0 0
chr9:97682200|97685040 U2AF2 5 3 1
chr9:97682200|97685040 DDX54 0 0 3
chr9:97682200|97685040 FIP1L1 1 1 1
chr9:97682200|97685040 PTBP1 0 1 0
chr9:97682200|97685040 HNRNPC 10 4 0
chr9:97682200|97685040 TRA2A 0 0 4
chr9:97682200|97685040 ZNF184 0 0 2
chr9:97682200|97685040 HNRNPA1 3 1 0
chr9:97682200|97685040 ZC3H7B 0 1 0
chr9:97682200|97685040 ACIN1 0 0 3
chr9:97682200|97685040 LIN28B 0 1 0
chr9:97682200|97685040 IGF2BP2 2 0 4
chr9:97682200|97685040 TARDBP 2 2 1
chr9:97682200|97685040 BUD13 0 0 1
chr9:97682200|97685040 RBM47 1 0 0
chr9:97682200|97685040 CSTF2T 0 1 1
chr9:97682200|97685040 CSTF2 0 1 0
chr9:97682200|97685040 AIFM1 0 0 1
chr9:97682200|97685040 ATXN2 0 1 0
chr9:97682200|97685040 EWSR1 0 0 1
chr9:97682200|97685040 EIF4A3 2 4 4
chr9:97682200|97685040 FBL 2 1 1