CircRNA Information

General Information
circRNA Basic Information
CircID chr9:97682200|97689639
Strand -
CircType exon
Host Gene ENSG00000136936.10;
Algorism find_circ;CIRI2;DCC;
Sequence GACCTGTTATGGAATTTGATTATGTAATATGCGAAGAATGTGGGAAAGAATTTATGGATTCTTATCTTATGAACCACTTTGATTTGCCAACTTGTGATAACTGCAGATTGTGAAGAGGTCTCTTGAAGTTTGGGGTAGTCAAGAAGCATTAGAAGAAGCAAAGGAAGTCCGACAGGAAAACCGAGAAAAAATGAAACAGAAGAAATTTGATAAAAAAGTAAAAGAGGTTGTTCCCGCCTTCCTGAATAGGCCACAAAGGGCTGAGACTGGAGTAGACACTGTAGAGATTAGACACAAGGAGCTTACTGTGCAGTTTTCTCAGAAGGCTCAGAACAGAGAGGAATAAAAGCAAGTCTAAAAGTATTTTAGTTGAAAAGAAATTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACAAAGAAGCTGACACAGTTTACTTCTTTATGGGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:97682200|97689639 hsa-miR-24-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr9:97682200|97689639 RBM5 0 1 0
chr9:97682200|97689639 U2AF2 4 3 1
chr9:97682200|97689639 ELAVL1 3 6 3
chr9:97682200|97689639 CPSF7 0 1 0
chr9:97682200|97689639 TAF15 1 0 0
chr9:97682200|97689639 FMR1 0 0 1
chr9:97682200|97689639 CPSF6 0 0 2
chr9:97682200|97689639 NUDT21 0 0 1
chr9:97682200|97689639 FUS 1 2 0
chr9:97682200|97689639 SRSF1 1 0 2
chr9:97682200|97689639 NOP58 1 1 3
chr9:97682200|97689639 NOP56 1 1 0
chr9:97682200|97689639 DDX54 0 0 3
chr9:97682200|97689639 FIP1L1 0 1 1
chr9:97682200|97689639 PTBP1 1 1 0
chr9:97682200|97689639 HNRNPC 4 4 0
chr9:97682200|97689639 TRA2A 1 0 4
chr9:97682200|97689639 ZNF184 0 0 3
chr9:97682200|97689639 HNRNPA1 0 1 0
chr9:97682200|97689639 ZC3H7B 0 1 0
chr9:97682200|97689639 ACIN1 0 0 3
chr9:97682200|97689639 LIN28B 0 1 0
chr9:97682200|97689639 IGF2BP3 1 0 0
chr9:97682200|97689639 IGF2BP2 4 0 4
chr9:97682200|97689639 TARDBP 4 2 1
chr9:97682200|97689639 BUD13 1 0 1
chr9:97682200|97689639 CSTF2T 0 1 1
chr9:97682200|97689639 CSTF2 2 1 0
chr9:97682200|97689639 AIFM1 0 0 1
chr9:97682200|97689639 ATXN2 2 1 0
chr9:97682200|97689639 EWSR1 0 0 1
chr9:97682200|97689639 EIF4A3 0 4 6
chr9:97682200|97689639 FBL 0 1 2