CircRNA Information

General Information
circRNA Basic Information
CircID chr9:97857698|97857851
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TGTCTCCGAGGTACTCGCTCCCCTGCGCGGCGCCCATTCCCACCTGGCCCGGCCGGTGCGCGAGCTCTTGGTGTCGTCGGCCGGTGGGAGGCCGAGAAGGGCTGTCGCTCTGTCTTCAACGCCTTGATCCCAACCCTCGCGCGTCTCCGTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:97857698|97857851 hsa-miR-335-5p 0 0 1
chr9:97857698|97857851 hsa-miR-335-3p 0 0 1
chr9:97857698|97857851 hsa-miR-638 1 0 1
chr9:97857698|97857851 hsa-miR-939-5p 0 0 1
chr9:97857698|97857851 hsa-miR-939-3p 0 0 1
chr9:97857698|97857851 hsa-miR-1234-3p 0 0 1
chr9:97857698|97857851 hsa-miR-1307-5p 0 0 1
chr9:97857698|97857851 hsa-miR-1307-3p 0 0 1
chr9:97857698|97857851 hsa-miR-1234 0 0 1
chr9:97857698|97857851 hsa-miR-139-3p 0 0 1
chr9:97857698|97857851 hsa-miR-532-3p 0 0 1
chr9:97857698|97857851 hsa-miR-296-3p 1 0 1
chr9:97857698|97857851 hsa-miR-1224-3p 0 0 1
chr9:97857698|97857851 hsa-miR-769-3p 0 0 1
chr9:97857698|97857851 hsa-miR-450b-3p 0 0 1
chr9:97857698|97857851 hsa-miR-1260 0 0 1
chr9:97857698|97857851 hsa-miR-1280 0 0 1
chr9:97857698|97857851 hsa-miR-129-3p 0 0 1
chr9:97857698|97857851 hsa-miR-658 1 0 0
chr9:97857698|97857851 hsa-miR-762 1 0 0
chr9:97857698|97857851 hsa-miR-1268a 1 0 0
chr9:97857698|97857851 hsa-miR-1268b 1 0 0
chr9:97857698|97857851 hsa-miR-4462 1 0 0
chr9:97857698|97857851 hsa-miR-5698 1 0 0
chr9:97857698|97857851 hsa-miR-6090 1 0 0
chr9:97857698|97857851 hsa-miR-9899 1 0 0
chr9:97857698|97857851 hsa-miR-6510-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6741-5p 1 0 0
chr9:97857698|97857851 hsa-miR-1292-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6805-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6798-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6786-5p 1 0 0
chr9:97857698|97857851 hsa-miR-4787-5p 1 0 0
chr9:97857698|97857851 hsa-miR-149-3p 1 0 0
chr9:97857698|97857851 hsa-miR-6824-5p 1 0 0
chr9:97857698|97857851 hsa-miR-3922-5p 1 0 0
chr9:97857698|97857851 hsa-miR-2277-5p 1 0 0
chr9:97857698|97857851 hsa-miR-1207-5p 1 0 0
chr9:97857698|97857851 hsa-miR-4763-3p 1 0 0
chr9:97857698|97857851 hsa-miR-6787-5p 1 0 0
chr9:97857698|97857851 hsa-miR-1343-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6754-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6756-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6722-3p 1 0 0
chr9:97857698|97857851 hsa-miR-6797-5p 1 0 0
chr9:97857698|97857851 hsa-miR-1909-3p 1 0 0
chr9:97857698|97857851 hsa-miR-328-5p 1 0 0
chr9:97857698|97857851 hsa-miR-4649-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6729-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6846-5p 1 0 0
chr9:97857698|97857851 hsa-miR-4758-5p 1 0 0
chr9:97857698|97857851 hsa-miR-10394-3p 1 0 0
chr9:97857698|97857851 hsa-miR-1266-5p 1 0 0
chr9:97857698|97857851 hsa-miR-6731-5p 1 0 0
chr9:97857698|97857851 hsa-miR-4667-5p 1 0 0
chr9:97857698|97857851 hsa-miR-9851-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr9:97857698|97857851
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MRGAHSHLARPVRELLVSSAGGRPRRAVALSSTP
Nucleotide Sequence CTGCGCGGCGCCCATTCCCACCTGGCCCGGCCGGTGCGCGAGCTCTTGGTGTCGTCGGCCGGTGGGAGGCCGAGAAGGGCTGTCGCTCTGTCTTCAACGCCTTGA

CircID chr9:97857698|97857851
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MKTERQPFSASHRPTTPRARAPAGPGGNGRRAGERVPRR
Nucleotide Sequence TTGAAGACAGAGCGACAGCCCTTCTCGGCCTCCCACCGGCCGACGACACCAAGAGCTCGCGCACCGGCCGGGCCAGGTGGGAATGGGCGCCGCGCAGGGGAGCGAGTACCTCGGAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites