CircRNA Information

General Information
circRNA Basic Information
CircID chr9:98124329|98124463
Strand -
CircType exon
Host Gene ENSG00000106789.11;
Algorism CIRI2;
Sequence TCCCGACCTCAAGCAATCCGCCCACCTCAGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCACTGCGTCTGGCCCAGTCTTCCCCTATTCTCTGGACCACAGTTTGAAAATCACAGACAGGTCAACCTAGATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:98124329|98124463 hsa-miR-192-5p 0 0 1
chr9:98124329|98124463 hsa-miR-192-3p 0 0 1
chr9:98124329|98124463 hsa-miR-198 1 1 1
chr9:98124329|98124463 hsa-miR-215-5p 0 0 1
chr9:98124329|98124463 hsa-miR-215-3p 0 0 1
chr9:98124329|98124463 hsa-miR-326 0 0 1
chr9:98124329|98124463 hsa-miR-563 0 0 1
chr9:98124329|98124463 hsa-miR-607 0 0 1
chr9:98124329|98124463 hsa-miR-631 0 0 1
chr9:98124329|98124463 hsa-miR-541-5p 0 0 1
chr9:98124329|98124463 hsa-miR-541-3p 0 0 1
chr9:98124329|98124463 hsa-miR-1305 0 0 1
chr9:98124329|98124463 hsa-miR-548g-5p 0 0 1
chr9:98124329|98124463 hsa-miR-548g-3p 0 0 1
chr9:98124329|98124463 hsa-miR-485-5p 0 0 1
chr9:98124329|98124463 hsa-miR-654-5p 0 0 1
chr9:98124329|98124463 hsa-miR-525-5p 0 0 1
chr9:98124329|98124463 hsa-miR-520a-5p 0 0 1
chr9:98124329|98124463 hsa-miR-330-5p 0 0 1
chr9:98124329|98124463 hsa-miR-7 0 0 1
chr9:98124329|98124463 hsa-miR-24 0 0 1
chr9:98124329|98124463 hsa-miR-608 1 0 0
chr9:98124329|98124463 hsa-miR-3188 1 0 0
chr9:98124329|98124463 hsa-miR-4257 1 0 0
chr9:98124329|98124463 hsa-miR-3929 1 1 0
chr9:98124329|98124463 hsa-miR-4421 0 1 0
chr9:98124329|98124463 hsa-miR-4430 1 0 0
chr9:98124329|98124463 hsa-miR-4463 1 1 0
chr9:98124329|98124463 hsa-miR-4478 1 1 0
chr9:98124329|98124463 hsa-miR-4494 1 1 0
chr9:98124329|98124463 hsa-miR-4505 1 1 0
chr9:98124329|98124463 hsa-miR-4507 1 0 0
chr9:98124329|98124463 hsa-miR-4508 1 0 0
chr9:98124329|98124463 hsa-miR-1587 1 0 0
chr9:98124329|98124463 hsa-miR-4651 1 0 0
chr9:98124329|98124463 hsa-miR-4656 1 0 0
chr9:98124329|98124463 hsa-miR-5693 0 1 0
chr9:98124329|98124463 hsa-miR-5698 1 0 0
chr9:98124329|98124463 hsa-miR-5787 1 0 0
chr9:98124329|98124463 hsa-miR-6085 1 0 0
chr9:98124329|98124463 hsa-miR-6086 1 0 0
chr9:98124329|98124463 hsa-miR-6134 1 1 0
chr9:98124329|98124463 hsa-miR-6745 1 0 0
chr9:98124329|98124463 hsa-miR-7704 1 0 0
chr9:98124329|98124463 hsa-miR-12114 1 0 0
chr9:98124329|98124463 hsa-miR-135a-3p 1 0 0
chr9:98124329|98124463 hsa-miR-92a-2-5p 1 0 0
chr9:98124329|98124463 hsa-miR-7155-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6765-5p 1 0 0
chr9:98124329|98124463 hsa-miR-7106-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6825-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6894-5p 1 0 0
chr9:98124329|98124463 hsa-miR-25-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6799-5p 1 0 0
chr9:98124329|98124463 hsa-miR-3192-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6880-5p 1 0 0
chr9:98124329|98124463 hsa-miR-7160-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6759-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6742-5p 1 0 0
chr9:98124329|98124463 hsa-miR-659-3p 1 0 0
chr9:98124329|98124463 hsa-miR-3180-3p 1 0 0
chr9:98124329|98124463 hsa-miR-6748-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6798-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6782-5p 1 0 0
chr9:98124329|98124463 hsa-miR-30b-3p 0 1 0
chr9:98124329|98124463 hsa-miR-4640-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6514-3p 0 1 0
chr9:98124329|98124463 hsa-miR-1228-5p 1 0 0
chr9:98124329|98124463 hsa-miR-7854-3p 1 0 0
chr9:98124329|98124463 hsa-miR-4787-5p 1 0 0
chr9:98124329|98124463 hsa-miR-149-3p 1 0 0
chr9:98124329|98124463 hsa-miR-6824-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6789-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6802-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6781-5p 1 0 0
chr9:98124329|98124463 hsa-miR-7162-3p 0 1 0
chr9:98124329|98124463 hsa-let-7e-5p 1 0 0
chr9:98124329|98124463 hsa-miR-3120-5p 0 1 0
chr9:98124329|98124463 hsa-miR-6847-3p 0 1 0
chr9:98124329|98124463 hsa-miR-514a-5p 0 1 0
chr9:98124329|98124463 hsa-miR-1233-5p 1 0 0
chr9:98124329|98124463 hsa-miR-1273h-5p 0 1 0
chr9:98124329|98124463 hsa-miR-4763-3p 1 0 0
chr9:98124329|98124463 hsa-miR-6769b-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6778-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6787-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6812-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6816-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6865-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6870-5p 1 0 0
chr9:98124329|98124463 hsa-miR-3180 1 0 0
chr9:98124329|98124463 hsa-miR-6726-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6737-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6743-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6754-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6756-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6769a-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6813-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6815-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6819-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6851-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6722-3p 1 0 0
chr9:98124329|98124463 hsa-miR-6779-5p 0 1 0
chr9:98124329|98124463 hsa-miR-7111-5p 1 0 0
chr9:98124329|98124463 hsa-miR-3620-5p 1 0 0
chr9:98124329|98124463 hsa-miR-4728-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6780b-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6836-5p 1 0 0
chr9:98124329|98124463 hsa-miR-328-5p 1 0 0
chr9:98124329|98124463 hsa-miR-4725-3p 1 1 0
chr9:98124329|98124463 hsa-miR-4726-5p 1 1 0
chr9:98124329|98124463 hsa-miR-675-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6846-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6848-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6858-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6883-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6831-5p 1 0 0
chr9:98124329|98124463 hsa-miR-939-5p 1 0 0
chr9:98124329|98124463 hsa-miR-3940-5p 1 0 0
chr9:98124329|98124463 hsa-miR-10398-3p 1 0 0
chr9:98124329|98124463 hsa-miR-4472 1 0 0
chr9:98124329|98124463 hsa-miR-6766-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6785-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6849-5p 1 0 0
chr9:98124329|98124463 hsa-miR-6884-5p 1 1 0
chr9:98124329|98124463 hsa-miR-6876-3p 0 1 0
chr9:98124329|98124463 hsa-miR-371a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr9:98124329|98124463
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MSHCVWPSLPLFSGPQFENHRQVNLD
Nucleotide Sequence ATGAGCCACTGCGTCTGGCCCAGTCTTCCCCTATTCTCTGGACCACAGTTTGAAAATCACAGACAGGTCAACCTAGAT
CircID chr9:98124329|98124463
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MGQTQWLMPVIPALWEAEVGGLLEVG
Nucleotide Sequence CTGGGCCAGACGCAGTGGCTCATGCCTGTAATCCCAGCACTCTGGGAGGCTGAGGTGGGCGGATTGCTTGAGGTCGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab