CircRNA Information

General Information
circRNA Basic Information
CircID chr9:99968471|99968575
Strand +
CircType exon
Host Gene ENSG00000136874.9;
Algorism CIRI2;
Sequence CTGTGAAGCCCAACACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr9:99968471|99968575 hsa-miR-27a-5p 0 0 1
chr9:99968471|99968575 hsa-miR-27a-3p 0 0 1
chr9:99968471|99968575 hsa-miR-27b-5p 0 0 1
chr9:99968471|99968575 hsa-miR-27b-3p 0 0 1
chr9:99968471|99968575 hsa-miR-520g-5p 0 0 1
chr9:99968471|99968575 hsa-miR-520g-3p 0 0 1
chr9:99968471|99968575 hsa-miR-520h 0 0 1
chr9:99968471|99968575 hsa-miR-608 0 0 1
chr9:99968471|99968575 hsa-miR-609 0 0 1
chr9:99968471|99968575 hsa-miR-625-5p 0 0 1
chr9:99968471|99968575 hsa-miR-625-3p 0 0 1
chr9:99968471|99968575 hsa-miR-1301-5p 0 0 1
chr9:99968471|99968575 hsa-miR-1301-3p 0 0 1
chr9:99968471|99968575 hsa-miR-541-5p 0 0 1
chr9:99968471|99968575 hsa-miR-541-3p 0 0 1
chr9:99968471|99968575 hsa-miR-615-5p 0 0 1
chr9:99968471|99968575 hsa-miR-654-5p 0 0 1
chr9:99968471|99968575 hsa-miR-502-5p 0 0 1
chr9:99968471|99968575 hsa-miR-876-3p 0 0 1
chr9:99968471|99968575 hsa-miR-513a-5p 0 0 1
chr9:99968471|99968575 hsa-miR-1207-5p 1 0 1
chr9:99968471|99968575 hsa-miR-342-5p 0 0 1
chr9:99968471|99968575 hsa-miR-323-5p 0 0 1
chr9:99968471|99968575 hsa-miR-623 1 0 0
chr9:99968471|99968575 hsa-miR-638 1 0 0
chr9:99968471|99968575 hsa-miR-1268a 1 0 0
chr9:99968471|99968575 hsa-miR-4271 1 0 0
chr9:99968471|99968575 hsa-miR-3665 1 0 0
chr9:99968471|99968575 hsa-miR-1268b 1 0 0
chr9:99968471|99968575 hsa-miR-4440 1 0 0
chr9:99968471|99968575 hsa-miR-3960 1 0 0
chr9:99968471|99968575 hsa-miR-4651 1 0 0
chr9:99968471|99968575 hsa-miR-4660 1 0 0
chr9:99968471|99968575 hsa-miR-5047 1 0 0
chr9:99968471|99968575 hsa-miR-6127 1 0 0
chr9:99968471|99968575 hsa-miR-7703 1 0 0
chr9:99968471|99968575 hsa-miR-4433b-3p 1 0 0
chr9:99968471|99968575 hsa-miR-92a-2-5p 1 0 0
chr9:99968471|99968575 hsa-miR-323a-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6880-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6746-5p 1 0 0
chr9:99968471|99968575 hsa-miR-4722-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6806-5p 1 0 0
chr9:99968471|99968575 hsa-miR-8069 1 0 0
chr9:99968471|99968575 hsa-miR-6716-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6796-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6732-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6798-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6786-5p 1 0 0
chr9:99968471|99968575 hsa-miR-4787-5p 1 0 0
chr9:99968471|99968575 hsa-miR-149-3p 1 0 0
chr9:99968471|99968575 hsa-miR-6789-5p 1 0 0
chr9:99968471|99968575 hsa-miR-7156-3p 1 0 0
chr9:99968471|99968575 hsa-miR-3158-3p 1 0 0
chr9:99968471|99968575 hsa-miR-6770-3p 1 0 0
chr9:99968471|99968575 hsa-miR-4763-3p 1 0 0
chr9:99968471|99968575 hsa-miR-6769b-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6870-5p 1 0 0
chr9:99968471|99968575 hsa-miR-1343-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6752-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6756-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6769a-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6803-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6851-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6751-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6763-5p 1 0 0
chr9:99968471|99968575 hsa-miR-7111-5p 1 0 0
chr9:99968471|99968575 hsa-miR-10392-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6777-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6846-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6848-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6889-5p 1 0 0
chr9:99968471|99968575 hsa-miR-6511b-5p 1 0 0
chr9:99968471|99968575 hsa-miR-4472 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr9:99968471|99968575
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MVGGPIGLLAGFKVAGIAAALGGGVLGFT
Nucleotide Sequence ATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab