CircRNA Information

General Information
circRNA Basic Information
CircID chrX:100862263|100862469
Strand -
CircType exon
Host Gene ENSG00000007952.16;
Algorism CIRI2;
Sequence TCTCATTCATGCTCTCCTCTGTTTGACCCCGGACAATTCCACTGAAATAGACAAAGAAGGATGGTTTGGGACAAAGAATTATGCAAGGTCAGGGGCTGGGGCATGAGAATGAGGGTTCGAGGATCTTACCCAATGCCGTGAATCCCTAAGCCAAGGATATAGAAGATAAAAAGGTGGTGAGTATACCAGAAGACTTCAAAATAACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:100862263|100862469 hsa-miR-197-5p 0 0 1
chrX:100862263|100862469 hsa-miR-197-3p 0 0 1
chrX:100862263|100862469 hsa-miR-448 0 0 1
chrX:100862263|100862469 hsa-miR-555 0 1 1
chrX:100862263|100862469 hsa-miR-573 0 0 1
chrX:100862263|100862469 hsa-miR-1264 0 0 1
chrX:100862263|100862469 hsa-miR-1237-5p 0 0 1
chrX:100862263|100862469 hsa-miR-1237-3p 0 0 1
chrX:100862263|100862469 hsa-miR-1248 0 0 1
chrX:100862263|100862469 hsa-miR-1256 0 0 1
chrX:100862263|100862469 hsa-miR-1225-5p 0 0 1
chrX:100862263|100862469 hsa-miR-501-5p 0 0 1
chrX:100862263|100862469 hsa-miR-362-5p 0 1 1
chrX:100862263|100862469 hsa-miR-220b 0 0 1
chrX:100862263|100862469 hsa-miR-153 0 0 1
chrX:100862263|100862469 hsa-miR-219-2-3p 0 0 1
chrX:100862263|100862469 hsa-miR-4313 1 0 0
chrX:100862263|100862469 hsa-miR-4669 0 1 0
chrX:100862263|100862469 hsa-miR-4739 1 0 0
chrX:100862263|100862469 hsa-miR-4775 0 1 0
chrX:100862263|100862469 hsa-miR-205-3p 0 1 0
chrX:100862263|100862469 hsa-miR-6868-3p 0 1 0
chrX:100862263|100862469 hsa-miR-3150b-3p 0 1 0
chrX:100862263|100862469 hsa-miR-6763-3p 1 0 0
chrX:100862263|100862469 hsa-miR-7161-3p 1 1 0
chrX:100862263|100862469 hsa-miR-6847-5p 0 1 0
chrX:100862263|100862469 hsa-miR-5196-3p 1 0 0
chrX:100862263|100862469 hsa-miR-4732-3p 1 1 0
chrX:100862263|100862469 hsa-miR-4758-3p 1 0 0
chrX:100862263|100862469 hsa-miR-6715a-3p 0 1 0
chrX:100862263|100862469 hsa-miR-6758-3p 0 1 0
chrX:100862263|100862469 hsa-miR-4433b-5p 0 1 0
chrX:100862263|100862469 hsa-miR-6502-3p 0 1 0
chrX:100862263|100862469 hsa-miR-6812-5p 1 0 0
chrX:100862263|100862469 hsa-miR-10396a-3p 1 1 0
chrX:100862263|100862469 hsa-miR-10396b-3p 1 1 0
chrX:100862263|100862469 hsa-miR-6877-3p 0 1 0
chrX:100862263|100862469 hsa-miR-6511b-3p 1 1 0
chrX:100862263|100862469 hsa-miR-3150b-5p 1 0 0
chrX:100862263|100862469 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:100862263|100862469
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MVWDKELCKVRGWGMRMRVRGSYPMP
Nucleotide Sequence ATGGTTTGGGACAAAGAATTATGCAAGGTCAGGGGCTGGGGCATGAGAATGAGGGTTCGAGGATCTTACCCAATGCCGTGA

CircID chrX:100862263|100862469
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MTPDNSTEIDKEGWFGTKNYARSGAGA
Nucleotide Sequence TTGACCCCGGACAATTCCACTGAAATAGACAAAGAAGGATGGTTTGGGACAAAGAATTATGCAAGGTCAGGGGCTGGGGCATGA

CircID chrX:100862263|100862469
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGQRIMQGQGLGHENEGSRILPNAVNP
Nucleotide Sequence TTGGGACAAAGAATTATGCAAGGTCAGGGGCTGGGGCATGAGAATGAGGGTTCGAGGATCTTACCCAATGCCGTGAATCCCTAA

CircID chrX:100862263|100862469
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MVYSPPFYLLYPWLRDSRHWVRSSNPHSHAPAPDLA
Nucleotide Sequence CTGGTATACTCACCACCTTTTTATCTTCTATATCCTTGGCTTAGGGATTCACGGCATTGGGTAAGATCCTCGAACCCTCATTCTCATGCCCCAGCCCCTGACCTTGCATAA

CircID chrX:100862263|100862469
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MPQPLTLHNSLSQTILLCLFQWNCPGSNRGEHE
Nucleotide Sequence ATGCCCCAGCCCCTGACCTTGCATAATTCTTTGTCCCAAACCATCCTTCTTTGTCTATTTCAGTGGAATTGTCCGGGGTCAAACAGAGGAGAGCATGAATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites