CircRNA Information

General Information
circRNA Basic Information
CircID chrX:101493141|101493297
Strand +
CircType exon
Host Gene ENSG00000196440.10;
Algorism CIRI2;
Sequence CACCAGCCTGATCCACAGCCCCAGCCCCAGTCCAGCAGCTTCCACTGACCTGACTCCCAGGGCTATCCCAGGACCCAGCACTGGACTGGTTCGTGGGCCCTGGCCTAGACCCTCCAACATCCTGGCCACTAGCCCCACCCCAAGACCCTCCATTCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:101493141|101493297 hsa-miR-422a 0 0 1
chrX:101493141|101493297 hsa-miR-484 0 0 1
chrX:101493141|101493297 hsa-miR-601 0 0 1
chrX:101493141|101493297 hsa-miR-608 1 1 1
chrX:101493141|101493297 hsa-miR-635 0 0 1
chrX:101493141|101493297 hsa-miR-645 0 0 1
chrX:101493141|101493297 hsa-miR-1182 1 1 1
chrX:101493141|101493297 hsa-miR-1287-5p 0 0 1
chrX:101493141|101493297 hsa-miR-1287-3p 0 0 1
chrX:101493141|101493297 hsa-miR-1265 0 0 1
chrX:101493141|101493297 hsa-miR-1288-5p 0 0 1
chrX:101493141|101493297 hsa-miR-1288-3p 0 0 1
chrX:101493141|101493297 hsa-miR-1825 0 0 1
chrX:101493141|101493297 hsa-miR-671-5p 1 1 1
chrX:101493141|101493297 hsa-miR-512-3p 0 0 1
chrX:101493141|101493297 hsa-miR-193a-5p 0 0 1
chrX:101493141|101493297 hsa-miR-199a-5p 0 0 1
chrX:101493141|101493297 hsa-miR-199b-5p 0 0 1
chrX:101493141|101493297 hsa-miR-342-5p 0 0 1
chrX:101493141|101493297 hsa-miR-455-3p 0 0 1
chrX:101493141|101493297 hsa-miR-378 0 0 1
chrX:101493141|101493297 hsa-miR-1269 0 0 1
chrX:101493141|101493297 hsa-miR-138 0 0 1
chrX:101493141|101493297 hsa-miR-129-3p 0 0 1
chrX:101493141|101493297 hsa-miR-768-5p 0 0 1
chrX:101493141|101493297 hsa-miR-637 1 0 0
chrX:101493141|101493297 hsa-miR-638 1 0 0
chrX:101493141|101493297 hsa-miR-663a 1 0 0
chrX:101493141|101493297 hsa-miR-762 1 1 0
chrX:101493141|101493297 hsa-miR-4259 1 0 0
chrX:101493141|101493297 hsa-miR-4270 1 0 0
chrX:101493141|101493297 hsa-miR-3135b 1 0 0
chrX:101493141|101493297 hsa-miR-4463 1 0 0
chrX:101493141|101493297 hsa-miR-4489 1 1 0
chrX:101493141|101493297 hsa-miR-4498 1 0 0
chrX:101493141|101493297 hsa-miR-4505 1 1 0
chrX:101493141|101493297 hsa-miR-4507 1 0 0
chrX:101493141|101493297 hsa-miR-4508 1 0 0
chrX:101493141|101493297 hsa-miR-1587 1 1 0
chrX:101493141|101493297 hsa-miR-4651 1 1 0
chrX:101493141|101493297 hsa-miR-4669 1 0 0
chrX:101493141|101493297 hsa-miR-4675 0 1 0
chrX:101493141|101493297 hsa-miR-4752 0 1 0
chrX:101493141|101493297 hsa-miR-5194 1 0 0
chrX:101493141|101493297 hsa-miR-5572 1 0 0
chrX:101493141|101493297 hsa-miR-5787 1 1 0
chrX:101493141|101493297 hsa-miR-6069 0 1 0
chrX:101493141|101493297 hsa-miR-6079 0 1 0
chrX:101493141|101493297 hsa-miR-6085 1 0 0
chrX:101493141|101493297 hsa-miR-8052 1 0 0
chrX:101493141|101493297 hsa-miR-8075 1 0 0
chrX:101493141|101493297 hsa-miR-8078 0 1 0
chrX:101493141|101493297 hsa-miR-8089 1 0 0
chrX:101493141|101493297 hsa-miR-11399 0 1 0
chrX:101493141|101493297 hsa-miR-138-5p 0 1 0
chrX:101493141|101493297 hsa-miR-92a-2-5p 0 1 0
chrX:101493141|101493297 hsa-miR-7155-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6747-5p 1 0 0
chrX:101493141|101493297 hsa-miR-4687-3p 1 0 0
chrX:101493141|101493297 hsa-miR-3692-5p 0 1 0
chrX:101493141|101493297 hsa-miR-7851-3p 1 0 0
chrX:101493141|101493297 hsa-miR-1227-5p 1 0 0
chrX:101493141|101493297 hsa-miR-7114-5p 0 1 0
chrX:101493141|101493297 hsa-miR-6515-5p 0 1 0
chrX:101493141|101493297 hsa-miR-6089 1 0 0
chrX:101493141|101493297 hsa-miR-3192-5p 1 1 0
chrX:101493141|101493297 hsa-miR-3677-5p 1 1 0
chrX:101493141|101493297 hsa-miR-4474-3p 1 0 0
chrX:101493141|101493297 hsa-miR-6742-5p 1 0 0
chrX:101493141|101493297 hsa-miR-3151-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6796-5p 1 0 0
chrX:101493141|101493297 hsa-miR-185-3p 1 0 0
chrX:101493141|101493297 hsa-miR-6881-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6782-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6874-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6786-5p 1 0 0
chrX:101493141|101493297 hsa-miR-1229-5p 1 0 0
chrX:101493141|101493297 hsa-miR-193b-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6784-5p 1 0 0
chrX:101493141|101493297 hsa-miR-4640-5p 1 0 0
chrX:101493141|101493297 hsa-miR-937-5p 1 0 0
chrX:101493141|101493297 hsa-miR-194-3p 0 1 0
chrX:101493141|101493297 hsa-miR-744-5p 1 0 0
chrX:101493141|101493297 hsa-miR-4802-5p 0 1 0
chrX:101493141|101493297 hsa-miR-1207-5p 1 0 0
chrX:101493141|101493297 hsa-miR-4763-3p 1 0 0
chrX:101493141|101493297 hsa-miR-6812-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6816-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6737-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6752-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6756-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6769a-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6803-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6813-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6819-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6842-5p 1 0 0
chrX:101493141|101493297 hsa-miR-7110-5p 1 0 0
chrX:101493141|101493297 hsa-miR-1249-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6751-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6763-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6779-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6780a-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6797-5p 1 0 0
chrX:101493141|101493297 hsa-miR-3620-5p 1 1 0
chrX:101493141|101493297 hsa-miR-10396a-5p 1 0 0
chrX:101493141|101493297 hsa-miR-10396b-5p 1 0 0
chrX:101493141|101493297 hsa-miR-328-5p 1 0 0
chrX:101493141|101493297 hsa-miR-4685-5p 0 1 0
chrX:101493141|101493297 hsa-miR-4745-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6777-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6795-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6846-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6848-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6883-5p 1 0 0
chrX:101493141|101493297 hsa-miR-939-5p 1 0 0
chrX:101493141|101493297 hsa-miR-3940-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6855-5p 1 1 0
chrX:101493141|101493297 hsa-miR-4700-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6891-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6791-5p 1 1 0
chrX:101493141|101493297 hsa-miR-6718-5p 1 0 0
chrX:101493141|101493297 hsa-miR-6837-5p 0 1 0
chrX:101493141|101493297 hsa-miR-6783-3p 0 1 0
chrX:101493141|101493297 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:101493141|101493297
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MIHSPSPSPAASTDLTPRAIPGPSTGLVRGPWPRPSNILATSPTPRPSIR
Nucleotide Sequence CTGATCCACAGCCCCAGCCCCAGTCCAGCAGCTTCCACTGACCTGACTCCCAGGGCTATCCCAGGACCCAGCACTGGACTGGTTCGTGGGCCCTGGCCTAGACCCTCCAACATCCTGGCCACTAGCCCCACCCCAAGACCCTCCATTCGT
CircID chrX:101493141|101493297
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MDWFVGPGLDPPTSWPLAPPQDPPF
Nucleotide Sequence CTGGACTGGTTCGTGGGCCCTGGCCTAGACCCTCCAACATCCTGGCCACTAGCCCCACCCCAAGACCCTCCATTC
CircID chrX:101493141|101493297
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MEGLGVGLVARMLEGLGQGPRTSPVLGPGIALGVRSVEAAGLGLGLWIRLV
Nucleotide Sequence ATGGAGGGTCTTGGGGTGGGGCTAGTGGCCAGGATGTTGGAGGGTCTAGGCCAGGGCCCACGAACCAGTCCAGTGCTGGGTCCTGGGATAGCCCTGGGAGTCAGGTCAGTGGAAGCTGCTGGACTGGGGCTGGGGCTGTGGATCAGGCTGGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab