CircRNA Information

General Information
circRNA Basic Information
CircID chrX:101553336|101553468
Strand -
CircType exon
Host Gene ENSG00000126947.10;
Algorism CIRI2;
Sequence AGGACCCTTGCACCGAGTTTACCCTGCCCAGGAGGCAGGGGTGGAGGCTGCCACCCCACCAGGAGTGGATCTAGGGCCGGGGGCAGGGCAAGTGGAAAATCCAAGGGAAAGGCCCGAAGTAAGAGCACCAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:101553336|101553468 hsa-miR-204-5p 0 0 1
chrX:101553336|101553468 hsa-miR-204-3p 0 0 1
chrX:101553336|101553468 hsa-miR-211-5p 0 0 1
chrX:101553336|101553468 hsa-miR-211-3p 0 0 1
chrX:101553336|101553468 hsa-miR-608 0 0 1
chrX:101553336|101553468 hsa-miR-612 0 1 1
chrX:101553336|101553468 hsa-miR-623 0 0 1
chrX:101553336|101553468 hsa-miR-874-5p 0 0 1
chrX:101553336|101553468 hsa-miR-874-3p 0 0 1
chrX:101553336|101553468 hsa-miR-541-5p 0 0 1
chrX:101553336|101553468 hsa-miR-541-3p 0 0 1
chrX:101553336|101553468 hsa-miR-1290 0 0 1
chrX:101553336|101553468 hsa-miR-1250-5p 0 0 1
chrX:101553336|101553468 hsa-miR-1250-3p 0 0 1
chrX:101553336|101553468 hsa-miR-885-3p 0 0 1
chrX:101553336|101553468 hsa-miR-146b-3p 0 0 1
chrX:101553336|101553468 hsa-miR-654-5p 0 0 1
chrX:101553336|101553468 hsa-miR-1207-5p 0 1 1
chrX:101553336|101553468 hsa-miR-324-3p 0 0 1
chrX:101553336|101553468 hsa-miR-342-5p 0 0 1
chrX:101553336|101553468 hsa-miR-483-3p 0 0 1
chrX:101553336|101553468 hsa-miR-876-5p 0 0 1
chrX:101553336|101553468 hsa-miR-1285 0 0 1
chrX:101553336|101553468 hsa-miR-1913 0 1 0
chrX:101553336|101553468 hsa-miR-3181 1 0 0
chrX:101553336|101553468 hsa-miR-6860 0 1 0
chrX:101553336|101553468 hsa-miR-6747-3p 0 1 0
chrX:101553336|101553468 hsa-miR-6840-5p 0 1 0
chrX:101553336|101553468 hsa-miR-6721-5p 0 1 0
chrX:101553336|101553468 hsa-miR-1915-5p 0 1 0
chrX:101553336|101553468 hsa-miR-6742-5p 0 1 0
chrX:101553336|101553468 hsa-miR-6882-3p 0 1 0
chrX:101553336|101553468 hsa-miR-4436b-5p 0 1 0
chrX:101553336|101553468 hsa-miR-3944-3p 1 0 0
chrX:101553336|101553468 hsa-miR-5004-3p 0 1 0
chrX:101553336|101553468 hsa-miR-4446-5p 1 1 0
chrX:101553336|101553468 hsa-miR-6752-3p 0 1 0
chrX:101553336|101553468 hsa-miR-1914-5p 1 0 0
chrX:101553336|101553468 hsa-miR-4763-3p 0 1 0
chrX:101553336|101553468 hsa-miR-6737-5p 0 1 0
chrX:101553336|101553468 hsa-miR-6819-5p 0 1 0
chrX:101553336|101553468 hsa-miR-6774-5p 0 1 0
chrX:101553336|101553468 hsa-miR-3187-5p 0 1 0
chrX:101553336|101553468 hsa-miR-10396a-3p 1 0 0
chrX:101553336|101553468 hsa-miR-10396b-3p 1 0 0
chrX:101553336|101553468 hsa-miR-6877-3p 0 1 0
chrX:101553336|101553468 hsa-miR-6753-3p 1 0 0
chrX:101553336|101553468 hsa-miR-6801-3p 0 1 0
chrX:101553336|101553468 hsa-miR-6805-3p 1 1 0
chrX:101553336|101553468 hsa-miR-6810-3p 0 1 0
chrX:101553336|101553468 hsa-miR-6775-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:101553336|101553468
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MHRVYPAQEAGVEAATPPGVDLGPGAGQVENPRERPEVRAPG
Nucleotide Sequence TTGCACCGAGTTTACCCTGCCCAGGAGGCAGGGGTGGAGGCTGCCACCCCACCAGGAGTGGATCTAGGGCCGGGGGCAGGGCAAGTGGAAAATCCAAGGGAAAGGCCCGAAGTAAGAGCACCAGGG

CircID chrX:101553336|101553468
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence LVLLLRAFPLDFPLALPPALDPLLVGWQPPPLPPGQGKLGARV
Nucleotide Sequence CTGGTGCTCTTACTTCGGGCCTTTCCCTTGGATTTTCCACTTGCCCTGCCCCCGGCCCTAGATCCACTCCTGGTGGGGTGGCAGCCTCCACCCCTGCCTCCTGGGCAGGGTAAACTCGGTGCAAGGGTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites