CircRNA Information

General Information
circRNA Basic Information
CircID chrX:102715567|102715700
Strand +
CircType exon
Host Gene ENSG00000158301.17;
Algorism CIRI2;
Sequence ATAGGCTTCTTGCTTGGATCTGGGCCTGGACCTGGGATTAGTCTGATGTTTAGCCCTGTGCCTGGACCTGGTATTGGACTCTTCCCTGGGCCATGATCTGACACTTGTCTCTTCTCCAGTCCAGAAAGAAGACG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:102715567|102715700 hsa-miR-422a 0 0 1
chrX:102715567|102715700 hsa-miR-1299 0 0 1
chrX:102715567|102715700 hsa-miR-1253 0 0 1
chrX:102715567|102715700 hsa-miR-1288-5p 0 0 1
chrX:102715567|102715700 hsa-miR-1288-3p 0 0 1
chrX:102715567|102715700 hsa-miR-220c 0 0 1
chrX:102715567|102715700 hsa-miR-378 0 0 1
chrX:102715567|102715700 hsa-miR-1269 0 0 1
chrX:102715567|102715700 hsa-miR-516b 0 0 1
chrX:102715567|102715700 hsa-miR-762 1 0 0
chrX:102715567|102715700 hsa-miR-378c 1 0 0
chrX:102715567|102715700 hsa-miR-378h 1 0 0
chrX:102715567|102715700 hsa-miR-3135b 1 0 0
chrX:102715567|102715700 hsa-miR-4498 1 0 0
chrX:102715567|102715700 hsa-miR-5100 1 0 0
chrX:102715567|102715700 hsa-miR-11399 1 0 0
chrX:102715567|102715700 hsa-miR-6746-5p 1 0 0
chrX:102715567|102715700 hsa-miR-24-3p 1 0 0
chrX:102715567|102715700 hsa-miR-6753-5p 1 0 0
chrX:102715567|102715700 hsa-miR-877-5p 1 0 0
chrX:102715567|102715700 hsa-miR-4743-5p 1 0 0
chrX:102715567|102715700 hsa-miR-4733-3p 1 0 0
chrX:102715567|102715700 hsa-miR-6864-5p 1 0 0
chrX:102715567|102715700 hsa-miR-6895-5p 1 0 0
chrX:102715567|102715700 hsa-miR-584-3p 1 0 0
chrX:102715567|102715700 hsa-miR-3940-3p 1 0 0
chrX:102715567|102715700 hsa-miR-4529-3p 1 0 0
chrX:102715567|102715700 hsa-miR-5001-5p 1 0 0
chrX:102715567|102715700 hsa-miR-6743-5p 1 0 0
chrX:102715567|102715700 hsa-miR-6819-5p 1 0 0
chrX:102715567|102715700 hsa-miR-6780b-5p 1 0 0
chrX:102715567|102715700 hsa-miR-4725-3p 1 0 0
chrX:102715567|102715700 hsa-miR-4726-5p 1 0 0
chrX:102715567|102715700 hsa-miR-378a-3p 1 0 0
chrX:102715567|102715700 hsa-miR-6837-5p 1 0 0
chrX:102715567|102715700 hsa-miR-1295b-5p 1 0 0
chrX:102715567|102715700 hsa-miR-6839-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:102715567|102715700
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MLGSGPGPGISLMFSPVPGPGIGLFPGP
Nucleotide Sequence TTGCTTGGATCTGGGCCTGGACCTGGGATTAGTCTGATGTTTAGCCCTGTGCCTGGACCTGGTATTGGACTCTTCCCTGGGCCATGA

CircID chrX:102715567|102715700
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MCLDLVLDSSLGHDLTLVSSPVQKED
Nucleotide Sequence CTGTGCCTGGACCTGGTATTGGACTCTTCCCTGGGCCATGATCTGACACTTGTCTCTTCTCCAGTCCAGAAAGAAGAC

CircID chrX:102715567|102715700
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MEKRQVSDHGPGKSPIPGPGTGLNIRLIPGPGPDPSKKP
Nucleotide Sequence CTGGAGAAGAGACAAGTGTCAGATCATGGCCCAGGGAAGAGTCCAATACCAGGTCCAGGCACAGGGCTAAACATCAGACTAATCCCAGGTCCAGGCCCAGATCCAAGCAAGAAGCCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites