CircRNA Information

General Information
circRNA Basic Information
CircID chrX:103587148|103587255
Strand +
CircType exon
Host Gene ENSG00000133142.16;
Algorism CIRI2;
Sequence CTCTAGGGTAGAAGGGGTCCTGTAAATTTCTTTGCATCCACAAAAACGCCCCCAATTTCTGTTTGCTTTTTCTCTTCTCATCCTGCACCTTAGCCATATTGTCAAATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:103587148|103587255 hsa-miR-18a-5p 0 0 1
chrX:103587148|103587255 hsa-miR-18a-3p 0 0 1
chrX:103587148|103587255 hsa-miR-135b-5p 0 0 1
chrX:103587148|103587255 hsa-miR-135b-3p 0 0 1
chrX:103587148|103587255 hsa-miR-18b-5p 0 0 1
chrX:103587148|103587255 hsa-miR-18b-3p 0 0 1
chrX:103587148|103587255 hsa-miR-527 0 0 1
chrX:103587148|103587255 hsa-miR-1286 0 0 1
chrX:103587148|103587255 hsa-miR-1253 0 0 1
chrX:103587148|103587255 hsa-miR-1255a 0 1 1
chrX:103587148|103587255 hsa-miR-1275 0 0 1
chrX:103587148|103587255 hsa-miR-338-5p 0 0 1
chrX:103587148|103587255 hsa-miR-518a-5p 0 0 1
chrX:103587148|103587255 hsa-miR-1255b 0 0 1
chrX:103587148|103587255 hsa-miR-1300 0 0 1
chrX:103587148|103587255 hsa-miR-135a 0 0 1
chrX:103587148|103587255 hsa-miR-514 0 0 1
chrX:103587148|103587255 hsa-miR-608 1 0 0
chrX:103587148|103587255 hsa-miR-637 1 0 0
chrX:103587148|103587255 hsa-miR-1268a 1 0 0
chrX:103587148|103587255 hsa-miR-3132 1 0 0
chrX:103587148|103587255 hsa-miR-3154 1 0 0
chrX:103587148|103587255 hsa-miR-3165 1 0 0
chrX:103587148|103587255 hsa-miR-3196 1 0 0
chrX:103587148|103587255 hsa-miR-1268b 1 0 0
chrX:103587148|103587255 hsa-miR-4447 1 0 0
chrX:103587148|103587255 hsa-miR-4488 1 0 0
chrX:103587148|103587255 hsa-miR-4644 1 1 0
chrX:103587148|103587255 hsa-miR-4656 1 0 0
chrX:103587148|103587255 hsa-miR-4689 1 0 0
chrX:103587148|103587255 hsa-miR-4752 0 1 0
chrX:103587148|103587255 hsa-miR-5572 1 0 0
chrX:103587148|103587255 hsa-miR-5698 1 0 0
chrX:103587148|103587255 hsa-miR-5739 1 0 0
chrX:103587148|103587255 hsa-miR-6088 1 0 0
chrX:103587148|103587255 hsa-miR-12126 1 0 0
chrX:103587148|103587255 hsa-miR-4731-5p 1 0 0
chrX:103587148|103587255 hsa-miR-4700-3p 0 1 0
chrX:103587148|103587255 hsa-miR-6747-5p 1 0 0
chrX:103587148|103587255 hsa-miR-7160-5p 0 1 0
chrX:103587148|103587255 hsa-miR-6759-5p 0 1 0
chrX:103587148|103587255 hsa-miR-3180-3p 1 0 0
chrX:103587148|103587255 hsa-miR-6748-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6732-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6805-5p 1 0 0
chrX:103587148|103587255 hsa-miR-7109-5p 1 0 0
chrX:103587148|103587255 hsa-miR-1229-5p 1 0 0
chrX:103587148|103587255 hsa-miR-3691-5p 0 1 0
chrX:103587148|103587255 hsa-miR-4787-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6789-5p 1 0 0
chrX:103587148|103587255 hsa-miR-664b-5p 1 0 0
chrX:103587148|103587255 hsa-miR-5088-3p 0 1 0
chrX:103587148|103587255 hsa-miR-6846-3p 0 1 0
chrX:103587148|103587255 hsa-miR-6816-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6752-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6803-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6842-5p 1 0 0
chrX:103587148|103587255 hsa-miR-7110-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6751-5p 1 0 0
chrX:103587148|103587255 hsa-miR-3127-3p 0 1 0
chrX:103587148|103587255 hsa-miR-1237-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6846-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6848-5p 1 0 0
chrX:103587148|103587255 hsa-miR-4697-5p 1 0 0
chrX:103587148|103587255 hsa-miR-6511b-5p 1 0 0
chrX:103587148|103587255 hsa-miR-4665-5p 1 0 0
chrX:103587148|103587255 hsa-miR-3679-5p 1 0 0
chrX:103587148|103587255 hsa-miR-4472 1 0 0
chrX:103587148|103587255 hsa-miR-6756-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:103587148|103587255
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MHPQKRPQFLFAFSLLILHLSHIVK
Nucleotide Sequence TTGCATCCACAAAAACGCCCCCAATTTCTGTTTGCTTTTTCTCTTCTCATCCTGCACCTTAGCCATATTGTCAAA
CircID chrX:103587148|103587255
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MTIWLRCRMRREKANRNWGRFCGCKEIYRTPSTLE
Nucleotide Sequence TTGACAATATGGCTAAGGTGCAGGATGAGAAGAGAAAAAGCAAACAGAAATTGGGGGCGTTTTTGTGGATGCAAAGAAATTTACAGGACCCCTTCTACCCTAGAG
CircID chrX:103587148|103587255
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MAKVQDEKRKSKQKLGAFLWMQRNLQDPFYPR
Nucleotide Sequence ATGGCTAAGGTGCAGGATGAGAAGAGAAAAAGCAAACAGAAATTGGGGGCGTTTTTGTGGATGCAAAGAAATTTACAGGACCCCTTCTACCCTAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab