CircRNA Information

General Information
circRNA Basic Information
CircID chrX:103676494|103676691
Strand -
CircType exon
Host Gene ENSG00000123562.15;
Algorism CIRI2;
Sequence CGCATATTCCTTATTATCAACATTTCCCTGCGATTTCTTGCAATTTGCATACTCCTCCAGAATTGCATCTACATTTTTCTTGGCAGGGAGTTGAAACAGCTGCTTCTGCCTGGTAACTAAGTCCCAGTCCTCAACAAGCCATGGTTTTAATTCTTCAGGAATCTTCACTTTAACCTCCATTCTATTCTTAAACGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:103676494|103676691 hsa-miR-17-5p 0 0 1
chrX:103676494|103676691 hsa-miR-17-3p 0 0 1
chrX:103676494|103676691 hsa-miR-20a-5p 0 0 1
chrX:103676494|103676691 hsa-miR-20a-3p 0 0 1
chrX:103676494|103676691 hsa-miR-93-5p 0 0 1
chrX:103676494|103676691 hsa-miR-93-3p 0 0 1
chrX:103676494|103676691 hsa-miR-106a-5p 0 0 1
chrX:103676494|103676691 hsa-miR-106a-3p 0 0 1
chrX:103676494|103676691 hsa-miR-106b-5p 0 0 1
chrX:103676494|103676691 hsa-miR-106b-3p 0 0 1
chrX:103676494|103676691 hsa-miR-135b-5p 0 0 1
chrX:103676494|103676691 hsa-miR-135b-3p 0 0 1
chrX:103676494|103676691 hsa-miR-20b-5p 0 0 1
chrX:103676494|103676691 hsa-miR-20b-3p 0 0 1
chrX:103676494|103676691 hsa-miR-519d-5p 0 0 1
chrX:103676494|103676691 hsa-miR-519d-3p 0 0 1
chrX:103676494|103676691 hsa-miR-646 0 0 1
chrX:103676494|103676691 hsa-miR-653-5p 0 0 1
chrX:103676494|103676691 hsa-miR-653-3p 0 0 1
chrX:103676494|103676691 hsa-miR-765 0 1 1
chrX:103676494|103676691 hsa-miR-298 0 1 1
chrX:103676494|103676691 hsa-miR-1200 0 0 1
chrX:103676494|103676691 hsa-miR-1299 0 0 1
chrX:103676494|103676691 hsa-miR-1305 0 1 1
chrX:103676494|103676691 hsa-miR-1224-5p 1 1 1
chrX:103676494|103676691 hsa-miR-409-3p 0 0 1
chrX:103676494|103676691 hsa-miR-135a 0 0 1
chrX:103676494|103676691 hsa-miR-516b 0 0 1
chrX:103676494|103676691 hsa-miR-762 1 0 0
chrX:103676494|103676691 hsa-miR-3131 1 0 0
chrX:103676494|103676691 hsa-miR-3169 0 1 0
chrX:103676494|103676691 hsa-miR-4298 1 0 0
chrX:103676494|103676691 hsa-miR-3652 1 0 0
chrX:103676494|103676691 hsa-miR-3911 1 0 0
chrX:103676494|103676691 hsa-miR-4450 1 0 0
chrX:103676494|103676691 hsa-miR-4498 1 0 0
chrX:103676494|103676691 hsa-miR-2392 1 1 0
chrX:103676494|103676691 hsa-miR-4514 0 1 0
chrX:103676494|103676691 hsa-miR-4515 1 0 0
chrX:103676494|103676691 hsa-miR-1587 1 0 0
chrX:103676494|103676691 hsa-miR-4656 1 0 0
chrX:103676494|103676691 hsa-miR-4673 1 1 0
chrX:103676494|103676691 hsa-miR-4675 1 0 0
chrX:103676494|103676691 hsa-miR-4692 0 1 0
chrX:103676494|103676691 hsa-miR-4721 1 0 0
chrX:103676494|103676691 hsa-miR-5093 0 1 0
chrX:103676494|103676691 hsa-miR-5787 1 0 0
chrX:103676494|103676691 hsa-miR-8052 1 0 0
chrX:103676494|103676691 hsa-miR-8089 1 0 0
chrX:103676494|103676691 hsa-miR-6757-5p 1 0 0
chrX:103676494|103676691 hsa-miR-7847-3p 1 0 0
chrX:103676494|103676691 hsa-miR-7154-3p 1 0 0
chrX:103676494|103676691 hsa-miR-6721-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6716-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6810-5p 1 0 0
chrX:103676494|103676691 hsa-miR-5006-5p 0 1 0
chrX:103676494|103676691 hsa-miR-6753-5p 1 0 0
chrX:103676494|103676691 hsa-miR-3127-5p 1 0 0
chrX:103676494|103676691 hsa-miR-7113-3p 0 1 0
chrX:103676494|103676691 hsa-miR-92b-5p 1 0 0
chrX:103676494|103676691 hsa-miR-877-5p 1 0 0
chrX:103676494|103676691 hsa-miR-5584-5p 0 1 0
chrX:103676494|103676691 hsa-miR-7112-5p 1 0 0
chrX:103676494|103676691 hsa-miR-4802-5p 1 1 0
chrX:103676494|103676691 hsa-miR-5001-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6803-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6751-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6879-5p 1 0 0
chrX:103676494|103676691 hsa-miR-3620-5p 1 0 0
chrX:103676494|103676691 hsa-miR-10526-3p 1 0 0
chrX:103676494|103676691 hsa-miR-4685-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6738-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6858-5p 1 0 0
chrX:103676494|103676691 hsa-miR-1910-3p 0 1 0
chrX:103676494|103676691 hsa-miR-365a-5p 1 1 0
chrX:103676494|103676691 hsa-miR-365b-5p 1 0 0
chrX:103676494|103676691 hsa-miR-6511a-5p 0 1 0
chrX:103676494|103676691 hsa-miR-7843-5p 1 0 0
chrX:103676494|103676691 hsa-miR-619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:103676494|103676691
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MRFLAICILLQNCIYIFLGRELKQLLLPGN
Nucleotide Sequence CTGCGATTTCTTGCAATTTGCATACTCCTCCAGAATTGCATCTACATTTTTCTTGGCAGGGAGTTGAAACAGCTGCTTCTGCCTGGTAACTAA
CircID chrX:103676494|103676691
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MVTKSQSSTSHGFNSSGIFTLTSILFLNA
Nucleotide Sequence CTGGTAACTAAGTCCCAGTCCTCAACAAGCCATGGTTTTAATTCTTCAGGAATCTTCACTTTAACCTCCATTCTATTCTTAAACGCC
CircID chrX:103676494|103676691
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MEVKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYA
Nucleotide Sequence ATGGAGGTTAAAGTGAAGATTCCTGAAGAATTAAAACCATGGCTTGTTGAGGACTGGGACTTAGTTACCAGGCAGAAGCAGCTGTTTCAACTCCCTGCCAAGAAAAATGTAGATGCAATTCTGGAGGAGTATGCAAATTGCAAGAAATCGCAGGGAAATGTTGATAATAAGGAATATGCG
CircID chrX:103676494|103676691
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MGLSYQAEAAVSTPCQEKCRCNSGGVCKLQEIAGKC
Nucleotide Sequence CTGGGACTTAGTTACCAGGCAGAAGCAGCTGTTTCAACTCCCTGCCAAGAAAAATGTAGATGCAATTCTGGAGGAGTATGCAAATTGCAAGAAATCGCAGGGAAATGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab