CircRNA Information

General Information
circRNA Basic Information
CircID chrX:106928154|106928525
Strand +
CircType exon
Host Gene ENSG00000165376.9;
Algorism CIRI2;
Sequence CACAGAGATAATGCAGGCCAGGGAGGAGATTGCACTGGATGTCACCATCATGGCCTGGGCAGCCTGGATGTCAGCGGGCAGGCCCAGAAGGGTGCTATAGATGTCACACTGGGTGATGCCTGTGCTGTGTGTGGCACATTCCATCCAGAGGCCCTTGGAGAAGCCAACTGCTGTCACAATGCTGGCACCGACATAAGAACTTGTTTTCCAGCTGGGGAGCAGCATGGCAACCAGTGTGCCCAAAAGCCCCAGAAGGCCTAGGATGTAGCCCACAAGTTGGAGGCCAAGAGAGGCCATGGCAGACCTCTCAGTAGAAGCGTCTTCAGGGACTGCTCCCTTGTCTTCAGGCTGAAGCTCTTGCTCCTTGAACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:106928154|106928525 hsa-miR-29a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-29a-3p 0 0 1
chrX:106928154|106928525 hsa-miR-148a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-148a-3p 0 0 1
chrX:106928154|106928525 hsa-miR-221-5p 0 0 1
chrX:106928154|106928525 hsa-miR-221-3p 0 0 1
chrX:106928154|106928525 hsa-miR-222-5p 0 0 1
chrX:106928154|106928525 hsa-miR-222-3p 0 0 1
chrX:106928154|106928525 hsa-miR-130a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-130a-3p 0 0 1
chrX:106928154|106928525 hsa-miR-152-5p 0 0 1
chrX:106928154|106928525 hsa-miR-152-3p 0 0 1
chrX:106928154|106928525 hsa-miR-206 0 0 1
chrX:106928154|106928525 hsa-miR-29c-5p 0 0 1
chrX:106928154|106928525 hsa-miR-29c-3p 0 0 1
chrX:106928154|106928525 hsa-miR-301a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-301a-3p 0 0 1
chrX:106928154|106928525 hsa-miR-130b-5p 0 0 1
chrX:106928154|106928525 hsa-miR-130b-3p 0 0 1
chrX:106928154|106928525 hsa-miR-148b-5p 0 0 1
chrX:106928154|106928525 hsa-miR-148b-3p 0 0 1
chrX:106928154|106928525 hsa-miR-335-5p 0 0 1
chrX:106928154|106928525 hsa-miR-335-3p 0 0 1
chrX:106928154|106928525 hsa-miR-346 0 1 1
chrX:106928154|106928525 hsa-miR-489-5p 0 0 1
chrX:106928154|106928525 hsa-miR-489-3p 0 0 1
chrX:106928154|106928525 hsa-miR-570-5p 0 0 1
chrX:106928154|106928525 hsa-miR-570-3p 0 0 1
chrX:106928154|106928525 hsa-miR-612 0 0 1
chrX:106928154|106928525 hsa-miR-613 0 0 1
chrX:106928154|106928525 hsa-miR-637 1 0 1
chrX:106928154|106928525 hsa-miR-758-5p 0 0 1
chrX:106928154|106928525 hsa-miR-758-3p 0 0 1
chrX:106928154|106928525 hsa-miR-454-5p 0 0 1
chrX:106928154|106928525 hsa-miR-454-3p 0 0 1
chrX:106928154|106928525 hsa-miR-301b-5p 0 0 1
chrX:106928154|106928525 hsa-miR-301b-3p 0 0 1
chrX:106928154|106928525 hsa-miR-1227-5p 0 0 1
chrX:106928154|106928525 hsa-miR-1227-3p 0 0 1
chrX:106928154|106928525 hsa-miR-1237-5p 0 0 1
chrX:106928154|106928525 hsa-miR-1237-3p 0 0 1
chrX:106928154|106928525 hsa-miR-1202 0 0 1
chrX:106928154|106928525 hsa-miR-1250-5p 0 0 1
chrX:106928154|106928525 hsa-miR-1250-3p 0 0 1
chrX:106928154|106928525 hsa-miR-1825 0 1 1
chrX:106928154|106928525 hsa-miR-199a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-1207-3p 0 0 1
chrX:106928154|106928525 hsa-miR-875-3p 0 0 1
chrX:106928154|106928525 hsa-miR-455-5p 0 0 1
chrX:106928154|106928525 hsa-miR-199b-5p 0 1 1
chrX:106928154|106928525 hsa-miR-338-3p 0 0 1
chrX:106928154|106928525 hsa-miR-125a-5p 0 0 1
chrX:106928154|106928525 hsa-miR-515-5p 0 0 1
chrX:106928154|106928525 hsa-miR-542-3p 0 0 1
chrX:106928154|106928525 hsa-miR-125b 0 0 1
chrX:106928154|106928525 hsa-miR-1285 0 0 1
chrX:106928154|106928525 hsa-miR-1 0 0 1
chrX:106928154|106928525 hsa-miR-29b 0 0 1
chrX:106928154|106928525 hsa-miR-1182 1 1 0
chrX:106928154|106928525 hsa-miR-2861 0 1 0
chrX:106928154|106928525 hsa-miR-3183 0 1 0
chrX:106928154|106928525 hsa-miR-4295 0 1 0
chrX:106928154|106928525 hsa-miR-4296 0 1 0
chrX:106928154|106928525 hsa-miR-4265 0 1 0
chrX:106928154|106928525 hsa-miR-4274 0 1 0
chrX:106928154|106928525 hsa-miR-4279 1 1 0
chrX:106928154|106928525 hsa-miR-3941 0 1 0
chrX:106928154|106928525 hsa-miR-3689f 1 1 0
chrX:106928154|106928525 hsa-miR-4526 1 1 0
chrX:106928154|106928525 hsa-miR-4739 1 0 0
chrX:106928154|106928525 hsa-miR-5682 0 1 0
chrX:106928154|106928525 hsa-miR-6081 1 1 0
chrX:106928154|106928525 hsa-miR-8089 1 0 0
chrX:106928154|106928525 hsa-miR-8485 0 1 0
chrX:106928154|106928525 hsa-miR-370-3p 1 0 0
chrX:106928154|106928525 hsa-miR-6749-3p 1 1 0
chrX:106928154|106928525 hsa-miR-7-5p 0 1 0
chrX:106928154|106928525 hsa-miR-15a-3p 0 1 0
chrX:106928154|106928525 hsa-miR-7155-5p 1 0 0
chrX:106928154|106928525 hsa-miR-4726-3p 1 0 0
chrX:106928154|106928525 hsa-miR-6836-3p 1 0 0
chrX:106928154|106928525 hsa-miR-1972 0 1 0
chrX:106928154|106928525 hsa-miR-27a-5p 1 0 0
chrX:106928154|106928525 hsa-miR-139-3p 1 0 0
chrX:106928154|106928525 hsa-miR-7160-5p 1 0 0
chrX:106928154|106928525 hsa-miR-6845-3p 1 1 0
chrX:106928154|106928525 hsa-miR-6793-5p 1 0 0
chrX:106928154|106928525 hsa-miR-185-3p 1 0 0
chrX:106928154|106928525 hsa-miR-345-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6815-3p 0 1 0
chrX:106928154|106928525 hsa-miR-1343-3p 1 0 0
chrX:106928154|106928525 hsa-miR-939-3p 1 0 0
chrX:106928154|106928525 hsa-miR-4763-5p 0 1 0
chrX:106928154|106928525 hsa-miR-193b-5p 1 0 0
chrX:106928154|106928525 hsa-miR-4783-3p 1 0 0
chrX:106928154|106928525 hsa-miR-6784-5p 1 0 0
chrX:106928154|106928525 hsa-miR-6757-3p 0 1 0
chrX:106928154|106928525 hsa-miR-7113-3p 1 1 0
chrX:106928154|106928525 hsa-miR-6878-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6501-5p 0 1 0
chrX:106928154|106928525 hsa-miR-7111-3p 0 1 0
chrX:106928154|106928525 hsa-miR-4715-5p 0 1 0
chrX:106928154|106928525 hsa-miR-6825-3p 0 1 0
chrX:106928154|106928525 hsa-miR-4776-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6719-3p 1 1 0
chrX:106928154|106928525 hsa-miR-6871-3p 0 1 0
chrX:106928154|106928525 hsa-miR-3140-3p 0 1 0
chrX:106928154|106928525 hsa-miR-5088-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6755-3p 0 1 0
chrX:106928154|106928525 hsa-miR-4649-3p 1 0 0
chrX:106928154|106928525 hsa-miR-518c-5p 0 1 0
chrX:106928154|106928525 hsa-miR-6761-5p 0 1 0
chrX:106928154|106928525 hsa-miR-1244 0 1 0
chrX:106928154|106928525 hsa-miR-7107-5p 0 1 0
chrX:106928154|106928525 hsa-miR-3127-3p 0 1 0
chrX:106928154|106928525 hsa-miR-3620-5p 1 0 0
chrX:106928154|106928525 hsa-miR-3085-5p 1 1 0
chrX:106928154|106928525 hsa-miR-6855-5p 1 0 0
chrX:106928154|106928525 hsa-miR-6791-3p 1 0 0
chrX:106928154|106928525 hsa-miR-7107-3p 0 1 0
chrX:106928154|106928525 hsa-miR-4757-5p 0 1 0
chrX:106928154|106928525 hsa-miR-6829-3p 1 0 0
chrX:106928154|106928525 hsa-miR-4723-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6769b-3p 0 1 0
chrX:106928154|106928525 hsa-miR-6744-3p 1 1 0
chrX:106928154|106928525 hsa-miR-4691-5p 1 0 0
chrX:106928154|106928525 hsa-miR-4769-3p 0 1 0
chrX:106928154|106928525 hsa-miR-4482-5p 0 1 0
chrX:106928154|106928525 hsa-miR-3922-3p 0 1 0
chrX:106928154|106928525 hsa-miR-3064-3p 0 1 0
chrX:106928154|106928525 hsa-miR-525-3p 0 1 0
chrX:106928154|106928525 hsa-miR-7157-5p 0 1 0
chrX:106928154|106928525 hsa-miR-4789-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:106928154|106928525
ORF Type ORF1
Protein Length 68
Nucleotide Length 207
Protein Sequence MGSLDVSGQAQKGAIDVTLGDACAVCGTFHPEALGEANCCHNAGTDIRTCFPAGEQHGNQCAQKPQKA
Nucleotide Sequence CTGGGCAGCCTGGATGTCAGCGGGCAGGCCCAGAAGGGTGCTATAGATGTCACACTGGGTGATGCCTGTGCTGTGTGTGGCACATTCCATCCAGAGGCCCTTGGAGAAGCCAACTGCTGTCACAATGCTGGCACCGACATAAGAACTTGTTTTCCAGCTGGGGAGCAGCATGGCAACCAGTGTGCCCAAAAGCCCCAGAAGGCCTAG
CircID chrX:106928154|106928525
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MEAKRGHGRPLSRSVFRDCSLVFRLKLLLLEH
Nucleotide Sequence TTGGAGGCCAAGAGAGGCCATGGCAGACCTCTCAGTAGAAGCGTCTTCAGGGACTGCTCCCTTGTCTTCAGGCTGAAGCTCTTGCTCCTTGAACAC
CircID chrX:106928154|106928525
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MQAREEIALDVTIMAWAAWMSAGRPRRVL
Nucleotide Sequence ATGCAGGCCAGGGAGGAGATTGCACTGGATGTCACCATCATGGCCTGGGCAGCCTGGATGTCAGCGGGCAGGCCCAGAAGGGTGCTATAG
CircID chrX:106928154|106928525
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MSHWVMPVLCVAHSIQRPLEKPTAVTMLAPT
Nucleotide Sequence ATGTCACACTGGGTGATGCCTGTGCTGTGTGTGGCACATTCCATCCAGAGGCCCTTGGAGAAGCCAACTGCTGTCACAATGCTGGCACCGACATAA
CircID chrX:106928154|106928525
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MHWMSPSWPGQPGCQRAGPEGCYRCHTG
Nucleotide Sequence TTGCACTGGATGTCACCATCATGGCCTGGGCAGCCTGGATGTCAGCGGGCAGGCCCAGAAGGGTGCTATAGATGTCACACTGGGTGA
CircID chrX:106928154|106928525
ORF Type ORF6
Protein Length 64
Nucleotide Length 195
Protein Sequence MCCVWHIPSRGPWRSQLLSQCWHRHKNLFSSWGAAWQPVCPKAPEGLGCSPQVGGQERPWQTSQ
Nucleotide Sequence CTGTGCTGTGTGTGGCACATTCCATCCAGAGGCCCTTGGAGAAGCCAACTGCTGTCACAATGCTGGCACCGACATAAGAACTTGTTTTCCAGCTGGGGAGCAGCATGGCAACCAGTGTGCCCAAAAGCCCCAGAAGGCCTAGGATGTAGCCCACAAGTTGGAGGCCAAGAGAGGCCATGGCAGACCTCTCAGTAG
CircID chrX:106928154|106928525
ORF Type ORF7
Protein Length 99
Nucleotide Length 297
Protein Sequence MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISV
Nucleotide Sequence ATGGCCTCTCTTGGCCTCCAACTTGTGGGCTACATCCTAGGCCTTCTGGGGCTTTTGGGCACACTGGTTGCCATGCTGCTCCCCAGCTGGAAAACAAGTTCTTATGTCGGTGCCAGCATTGTGACAGCAGTTGGCTTCTCCAAGGGCCTCTGGATGGAATGTGCCACACACAGCACAGGCATCACCCAGTGTGACATCTATAGCACCCTTCTGGGCCTGCCCGCTGACATCCAGGCTGCCCAGGCCATGATGGTGACATCCAGTGCAATCTCCTCCCTGGCCTGCATTATCTCTGTG
CircID chrX:106928154|106928525
ORF Type ORF8
Protein Length 29
Nucleotide Length 90
Protein Sequence MKTREQSLKTLLLRGLPWPLLASNLWATS
Nucleotide Sequence CTGAAGACAAGGGAGCAGTCCCTGAAGACGCTTCTACTGAGAGGTCTGCCATGGCCTCTCTTGGCCTCCAACTTGTGGGCTACATCCTAG
CircID chrX:106928154|106928525
ORF Type ORF9
Protein Length 39
Nucleotide Length 120
Protein Sequence MASPRASGWNVPHTAQASPSVTSIAPFWACPLTSRLPRP
Nucleotide Sequence TTGGCTTCTCCAAGGGCCTCTGGATGGAATGTGCCACACACAGCACAGGCATCACCCAGTGTGACATCTATAGCACCCTTCTGGGCCTGCCCGCTGACATCCAGGCTGCCCAGGCCATGA
CircID chrX:106928154|106928525
ORF Type ORF10
Protein Length 35
Nucleotide Length 108
Protein Sequence MENKFLCRCQHCDSSWLLQGPLDGMCHTQHRHHPV
Nucleotide Sequence CTGGAAAACAAGTTCTTATGTCGGTGCCAGCATTGTGACAGCAGTTGGCTTCTCCAAGGGCCTCTGGATGGAATGTGCCACACACAGCACAGGCATCACCCAGTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab