CircRNA Information

General Information
circRNA Basic Information
CircID chrX:107714016|107714169
Strand -
CircType exon
Host Gene ENSG00000157514.15;
Algorism CIRI2;
Sequence TTGGCTCAATCTCTCCCATCTGTGTCCCCTGCCTTCACGAAACAGAGGAGAAGAGAGAGGTTGCCTCTGCTTAAAACACAAGTGGCTTCTTCATAGGAACAGTCGTTGTCAGGTGAAGCTGTTGAAGATGTCCATGGAGATGAGAAACAGACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:107714016|107714169 hsa-miR-136-5p 0 0 1
chrX:107714016|107714169 hsa-miR-136-3p 0 0 1
chrX:107714016|107714169 hsa-miR-185-5p 0 0 1
chrX:107714016|107714169 hsa-miR-185-3p 0 0 1
chrX:107714016|107714169 hsa-miR-412-5p 0 0 1
chrX:107714016|107714169 hsa-miR-412-3p 0 0 1
chrX:107714016|107714169 hsa-miR-581 0 0 1
chrX:107714016|107714169 hsa-miR-421 0 0 1
chrX:107714016|107714169 hsa-miR-940 0 0 1
chrX:107714016|107714169 hsa-miR-942-5p 0 0 1
chrX:107714016|107714169 hsa-miR-942-3p 0 0 1
chrX:107714016|107714169 hsa-miR-1236-5p 0 0 1
chrX:107714016|107714169 hsa-miR-1236-3p 0 0 1
chrX:107714016|107714169 hsa-miR-337-3p 0 0 1
chrX:107714016|107714169 hsa-miR-1207-5p 1 1 1
chrX:107714016|107714169 hsa-miR-549 0 0 1
chrX:107714016|107714169 hsa-miR-650 0 1 0
chrX:107714016|107714169 hsa-miR-4462 1 1 0
chrX:107714016|107714169 hsa-miR-3960 1 0 0
chrX:107714016|107714169 hsa-miR-4710 1 0 0
chrX:107714016|107714169 hsa-miR-5787 1 0 0
chrX:107714016|107714169 hsa-miR-8089 1 0 0
chrX:107714016|107714169 hsa-miR-6510-5p 1 1 0
chrX:107714016|107714169 hsa-miR-4695-5p 1 0 0
chrX:107714016|107714169 hsa-miR-6873-3p 0 1 0
chrX:107714016|107714169 hsa-miR-7110-3p 0 1 0
chrX:107714016|107714169 hsa-miR-6798-5p 1 0 0
chrX:107714016|107714169 hsa-miR-2467-3p 0 1 0
chrX:107714016|107714169 hsa-miR-1226-5p 1 1 0
chrX:107714016|107714169 hsa-miR-6771-5p 1 0 0
chrX:107714016|107714169 hsa-miR-4713-3p 1 0 0
chrX:107714016|107714169 hsa-miR-7111-3p 0 1 0
chrX:107714016|107714169 hsa-miR-6780a-3p 0 1 0
chrX:107714016|107714169 hsa-miR-6824-5p 1 0 0
chrX:107714016|107714169 hsa-miR-3191-3p 0 1 0
chrX:107714016|107714169 hsa-miR-6792-5p 0 1 0
chrX:107714016|107714169 hsa-miR-4763-3p 1 1 0
chrX:107714016|107714169 hsa-miR-6893-5p 0 1 0
chrX:107714016|107714169 hsa-miR-6722-3p 1 1 0
chrX:107714016|107714169 hsa-miR-6808-5p 1 1 0
chrX:107714016|107714169 hsa-miR-6879-5p 1 1 0
chrX:107714016|107714169 hsa-miR-6754-3p 0 1 0
chrX:107714016|107714169 hsa-miR-5196-5p 1 0 0
chrX:107714016|107714169 hsa-miR-642b-3p 1 0 0
chrX:107714016|107714169 hsa-miR-6735-5p 1 1 0
chrX:107714016|107714169 hsa-miR-6794-5p 1 0 0
chrX:107714016|107714169 hsa-miR-6795-5p 1 0 0
chrX:107714016|107714169 hsa-miR-6887-5p 1 0 0
chrX:107714016|107714169 hsa-miR-30c-1-3p 0 1 0
chrX:107714016|107714169 hsa-miR-7107-3p 1 1 0
chrX:107714016|107714169 hsa-miR-4723-3p 0 1 0
chrX:107714016|107714169 hsa-miR-642a-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:107714016|107714169
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence LAQSLPSVSPAFTKQRRRERLPLLKTQVASS
Nucleotide Sequence TTGGCTCAATCTCTCCCATCTGTGTCCCCTGCCTTCACGAAACAGAGGAGAAGAGAGAGGTTGCCTCTGCTTAAAACACAAGTGGCTTCTTCATAG

CircID chrX:107714016|107714169
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MCPLPSRNRGEERGCLCLKHKWLLHRNSRCQVKLLKMSMEMRNRP
Nucleotide Sequence CTGTGTCCCCTGCCTTCACGAAACAGAGGAGAAGAGAGAGGTTGCCTCTGCTTAAAACACAAGTGGCTTCTTCATAGGAACAGTCGTTGTCAGGTGAAGCTGTTGAAGATGTCCATGGAGATGAGAAACAGACCC

CircID chrX:107714016|107714169
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MCFKQRQPLSSPLFREGRGHRWERLSQ
Nucleotide Sequence TTGTGTTTTAAGCAGAGGCAACCTCTCTCTTCTCCTCTGTTTCGTGAAGGCAGGGGACACAGATGGGAGAGATTGAGCCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites