CircRNA Information

General Information
circRNA Basic Information
CircID chrX:110177416|110177581
Strand -
CircType exon
Host Gene ENSG00000157600.10;
Algorism CIRI2;
Sequence CCGTCACTGTCTCCCCTGAACCCCCACACAGTGGCTTCCCTTAGAACCAGTCTTTGTACTCTCCCTAAACAGCAGCAGGCTTAGGATTTTTGTCAGGCTGGTTCTTGCGTGCTCTGTGCCCCCACCAGTTTGCTCACCTCTTGGGGCATTTTGTAATGTGTTTTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:110177416|110177581 hsa-miR-370-5p 0 0 1
chrX:110177416|110177581 hsa-miR-370-3p 0 0 1
chrX:110177416|110177581 hsa-miR-570-5p 0 0 1
chrX:110177416|110177581 hsa-miR-570-3p 0 0 1
chrX:110177416|110177581 hsa-miR-596 0 0 1
chrX:110177416|110177581 hsa-miR-892a 0 0 1
chrX:110177416|110177581 hsa-miR-541-5p 0 0 1
chrX:110177416|110177581 hsa-miR-541-3p 0 0 1
chrX:110177416|110177581 hsa-miR-1321 0 0 1
chrX:110177416|110177581 hsa-miR-671-5p 1 1 1
chrX:110177416|110177581 hsa-miR-491-5p 0 0 1
chrX:110177416|110177581 hsa-miR-654-5p 0 0 1
chrX:110177416|110177581 hsa-miR-524-5p 0 0 1
chrX:110177416|110177581 hsa-miR-582-3p 0 0 1
chrX:110177416|110177581 hsa-miR-548b-3p 0 0 1
chrX:110177416|110177581 hsa-miR-548c-3p 0 0 1
chrX:110177416|110177581 hsa-miR-520d-5p 0 0 1
chrX:110177416|110177581 hsa-miR-644 0 0 1
chrX:110177416|110177581 hsa-miR-323-3p 0 0 1
chrX:110177416|110177581 hsa-miR-147 0 0 1
chrX:110177416|110177581 hsa-miR-365 0 0 1
chrX:110177416|110177581 hsa-miR-3170 1 0 0
chrX:110177416|110177581 hsa-miR-3175 0 1 0
chrX:110177416|110177581 hsa-miR-4293 0 1 0
chrX:110177416|110177581 hsa-miR-3911 1 0 0
chrX:110177416|110177581 hsa-miR-4447 0 1 0
chrX:110177416|110177581 hsa-miR-4689 1 0 0
chrX:110177416|110177581 hsa-miR-5698 1 1 0
chrX:110177416|110177581 hsa-miR-8085 1 1 0
chrX:110177416|110177581 hsa-miR-9500 0 1 0
chrX:110177416|110177581 hsa-miR-12115 1 0 0
chrX:110177416|110177581 hsa-miR-4687-3p 1 0 0
chrX:110177416|110177581 hsa-miR-6793-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6796-5p 0 1 0
chrX:110177416|110177581 hsa-miR-23a-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6782-5p 1 1 0
chrX:110177416|110177581 hsa-miR-6835-5p 1 0 0
chrX:110177416|110177581 hsa-miR-7109-5p 1 0 0
chrX:110177416|110177581 hsa-miR-193b-5p 1 0 0
chrX:110177416|110177581 hsa-miR-7854-3p 0 1 0
chrX:110177416|110177581 hsa-miR-149-3p 1 0 0
chrX:110177416|110177581 hsa-miR-3162-5p 1 1 0
chrX:110177416|110177581 hsa-miR-3619-3p 1 0 0
chrX:110177416|110177581 hsa-miR-5699-5p 0 1 0
chrX:110177416|110177581 hsa-miR-6787-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6812-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6752-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6756-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6803-5p 1 1 0
chrX:110177416|110177581 hsa-miR-6851-5p 1 0 0
chrX:110177416|110177581 hsa-miR-7110-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6751-5p 1 0 0
chrX:110177416|110177581 hsa-miR-7111-5p 1 1 0
chrX:110177416|110177581 hsa-miR-328-5p 1 0 0
chrX:110177416|110177581 hsa-miR-4632-5p 1 0 0
chrX:110177416|110177581 hsa-miR-4745-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6831-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6885-5p 1 1 0
chrX:110177416|110177581 hsa-miR-939-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6731-5p 0 1 0
chrX:110177416|110177581 hsa-miR-4665-5p 1 0 0
chrX:110177416|110177581 hsa-miR-6855-5p 1 1 0
chrX:110177416|110177581 hsa-miR-4676-5p 1 0 0
chrX:110177416|110177581 hsa-miR-7161-5p 0 1 0
chrX:110177416|110177581 hsa-miR-10399-5p 0 1 0
chrX:110177416|110177581 hsa-miR-323a-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:110177416|110177581
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSPLNPHTVASLRTSLCTLPKQQQA
Nucleotide Sequence CTGTCTCCCCTGAACCCCCACACAGTGGCTTCCCTTAGAACCAGTCTTTGTACTCTCCCTAAACAGCAGCAGGCTTAG

CircID chrX:110177416|110177581
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MSGWFLRALCPHQFAHLLGHFVMCF
Nucleotide Sequence TTGTCAGGCTGGTTCTTGCGTGCTCTGTGCCCCCACCAGTTTGCTCACCTCTTGGGGCATTTTGTAATGTGTTTT

CircID chrX:110177416|110177581
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MTKILSLLLFRESTKTGSKGSHCVGVQGRQ
Nucleotide Sequence CTGACAAAAATCCTAAGCCTGCTGCTGTTTAGGGAGAGTACAAAGACTGGTTCTAAGGGAAGCCACTGTGTGGGGGTTCAGGGGAGACAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites