CircNet

General Information

circRNA Basic Information

CircID	chrX:115634000\|115636978
Strand	+
CircType	exon
Host Gene	ENSG00000102024.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	TAAAATGATTAACCTTTCAGTTCCTGATACCATTGATGAAAGAGCAATCAACAAGAAGAAACTTACACCCTTCATCATTCAGGAAAACTTGAACTTGGCACTGAACTCTGCTTCTGCCATTGGGTGTCATGTTGTGAACATTGGTGCAGAAGATTTGAGGGCTGGGAAACCTCATCTGGTTTTGGGACTGCTTTGGCAGATCATTAAGATCGGTTTGTTCGCTGACATTGAATTAAGCAGGAATGAAGCCTTGGCTGCTTTACTCCGAGATGGTGAGACTTTGGAGGAACTTATGAAATTGTCTCCAGAAGAGCTTCTGCTTAGATGGGCAAACTTTCATTTGGAAAACTCGGGCTGGCAAAAAATTAACAACTTTAGTGCTGACATCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chrX:115634000\|115636978	hsa-miR-129-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chrX:115634000\|115636978
ORF Type	ORF1
Protein Length	129
Nucleotide Length	387
Protein Sequence	MINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINNFSADIK
Nucleotide Sequence	ATGATTAACCTTTCAGTTCCTGATACCATTGATGAAAGAGCAATCAACAAGAAGAAACTTACACCCTTCATCATTCAGGAAAACTTGAACTTGGCACTGAACTCTGCTTCTGCCATTGGGTGTCATGTTGTGAACATTGGTGCAGAAGATTTGAGGGCTGGGAAACCTCATCTGGTTTTGGGACTGCTTTGGCAGATCATTAAGATCGGTTTGTTCGCTGACATTGAATTAAGCAGGAATGAAGCCTTGGCTGCTTTACTCCGAGATGGTGAGACTTTGGAGGAACTTATGAAATTGTCTCCAGAAGAGCTTCTGCTTAGATGGGCAAACTTTCATTTGGAAAACTCGGGCTGGCAAAAAATTAACAACTTTAGTGCTGACATCAAG

CircID	chrX:115634000\|115636978
ORF Type	ORF2
Protein Length	53
Nucleotide Length	159
Protein Sequence	MRFPSPQIFCTNVHNMTPNGRSRVQCQVQVFLNDEGCKFLLVDCSFINGIRN*
Nucleotide Sequence	ATGAGGTTTCCCAGCCCTCAAATCTTCTGCACCAATGTTCACAACATGACACCCAATGGCAGAAGCAGAGTTCAGTGCCAAGTTCAAGTTTTCCTGAATGATGAAGGGTGTAAGTTTCTTCTTGTTGATTGCTCTTTCATCAATGGTATCAGGAACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chrX:115634000\|115636978	U2AF2	5	2	2
chrX:115634000\|115636978	MOV10	0	0	1
chrX:115634000\|115636978	ELAVL1	3	0	2
chrX:115634000\|115636978	PRPF8	0	1	0
chrX:115634000\|115636978	CNBP	0	0	1
chrX:115634000\|115636978	UPF1	0	0	1
chrX:115634000\|115636978	TAF15	1	0	0
chrX:115634000\|115636978	FMR1	0	0	8
chrX:115634000\|115636978	FUS	0	0	1
chrX:115634000\|115636978	DGCR8	0	0	5
chrX:115634000\|115636978	SRSF1	0	0	1
chrX:115634000\|115636978	NOP58	1	0	4
chrX:115634000\|115636978	ADAR	1	0	0
chrX:115634000\|115636978	NOP56	1	0	2
chrX:115634000\|115636978	SRSF9	0	0	2
chrX:115634000\|115636978	HNRNPL	1	0	0
chrX:115634000\|115636978	PTBP1	0	0	2
chrX:115634000\|115636978	HNRNPC	3	0	0
chrX:115634000\|115636978	TRA2A	0	0	1
chrX:115634000\|115636978	DDX3X	0	0	1
chrX:115634000\|115636978	ZC3H7B	0	0	2
chrX:115634000\|115636978	ACIN1	3	0	3
chrX:115634000\|115636978	LIN28A	0	0	2
chrX:115634000\|115636978	SND1	0	0	1
chrX:115634000\|115636978	IGF2BP1	0	0	2
chrX:115634000\|115636978	IGF2BP3	0	0	2
chrX:115634000\|115636978	IGF2BP2	0	0	9
chrX:115634000\|115636978	TARDBP	2	0	0
chrX:115634000\|115636978	RBFOX2	0	1	0
chrX:115634000\|115636978	RBM47	1	0	2
chrX:115634000\|115636978	FBL	0	0	5
chrX:115634000\|115636978	EIF4A3	0	1	4
chrX:115634000\|115636978	AGO2	0	0	5

CircRNA Information