CircRNA Information

General Information
circRNA Basic Information
CircID chrX:1293736|1293951
Strand +
CircType exon
Host Gene ENSG00000265658.4;
Algorism CIRI2;
Sequence CTCTTTGTCTACGCTGGGTCCAGGTGGAGATGGGGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGTGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTCGGTCCAGGTGGATGTGGACTAGGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:1293736|1293951 hsa-miR-504-5p 0 0 1
chrX:1293736|1293951 hsa-miR-504-3p 0 0 1
chrX:1293736|1293951 hsa-miR-554 0 0 1
chrX:1293736|1293951 hsa-miR-619-5p 0 0 1
chrX:1293736|1293951 hsa-miR-619-3p 0 0 1
chrX:1293736|1293951 hsa-miR-765 0 0 1
chrX:1293736|1293951 hsa-miR-1253 0 0 1
chrX:1293736|1293951 hsa-miR-767-5p 0 0 1
chrX:1293736|1293951 hsa-miR-199a-5p 0 1 1
chrX:1293736|1293951 hsa-miR-1224-3p 0 1 1
chrX:1293736|1293951 hsa-miR-199b-5p 0 1 1
chrX:1293736|1293951 hsa-miR-324-3p 0 0 1
chrX:1293736|1293951 hsa-miR-220b 0 0 1
chrX:1293736|1293951 hsa-miR-422a 0 1 0
chrX:1293736|1293951 hsa-miR-575 0 1 0
chrX:1293736|1293951 hsa-miR-1260a 0 1 0
chrX:1293736|1293951 hsa-miR-1913 0 1 0
chrX:1293736|1293951 hsa-miR-711 0 1 0
chrX:1293736|1293951 hsa-miR-378b 0 1 0
chrX:1293736|1293951 hsa-miR-3138 0 1 0
chrX:1293736|1293951 hsa-miR-378c 0 1 0
chrX:1293736|1293951 hsa-miR-4280 0 1 0
chrX:1293736|1293951 hsa-miR-3911 0 1 0
chrX:1293736|1293951 hsa-miR-3935 0 1 0
chrX:1293736|1293951 hsa-miR-4432 0 1 0
chrX:1293736|1293951 hsa-miR-378h 0 1 0
chrX:1293736|1293951 hsa-miR-4516 0 1 0
chrX:1293736|1293951 hsa-miR-4522 0 1 0
chrX:1293736|1293951 hsa-miR-378i 0 1 0
chrX:1293736|1293951 hsa-miR-4658 0 1 0
chrX:1293736|1293951 hsa-miR-4683 0 1 0
chrX:1293736|1293951 hsa-miR-4739 1 0 0
chrX:1293736|1293951 hsa-miR-4784 0 1 0
chrX:1293736|1293951 hsa-miR-5193 0 1 0
chrX:1293736|1293951 hsa-miR-197-3p 1 1 0
chrX:1293736|1293951 hsa-miR-18a-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4700-3p 1 0 0
chrX:1293736|1293951 hsa-miR-6747-3p 0 1 0
chrX:1293736|1293951 hsa-miR-1225-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4722-5p 0 1 0
chrX:1293736|1293951 hsa-miR-6806-5p 1 1 0
chrX:1293736|1293951 hsa-miR-3189-5p 0 1 0
chrX:1293736|1293951 hsa-miR-1915-5p 0 1 0
chrX:1293736|1293951 hsa-miR-6772-5p 0 1 0
chrX:1293736|1293951 hsa-miR-4725-5p 0 1 0
chrX:1293736|1293951 hsa-miR-6765-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4436b-5p 1 0 0
chrX:1293736|1293951 hsa-miR-4763-5p 0 1 0
chrX:1293736|1293951 hsa-miR-3614-5p 0 1 0
chrX:1293736|1293951 hsa-miR-3690 1 1 0
chrX:1293736|1293951 hsa-miR-1306-5p 0 1 0
chrX:1293736|1293951 hsa-miR-4758-3p 0 1 0
chrX:1293736|1293951 hsa-miR-6752-3p 0 1 0
chrX:1293736|1293951 hsa-miR-483-5p 0 1 0
chrX:1293736|1293951 hsa-miR-6748-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4433a-5p 0 1 0
chrX:1293736|1293951 hsa-miR-3173-5p 0 1 0
chrX:1293736|1293951 hsa-miR-4433b-5p 0 1 0
chrX:1293736|1293951 hsa-miR-3157-3p 0 1 0
chrX:1293736|1293951 hsa-miR-6732-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4524b-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4485-5p 0 1 0
chrX:1293736|1293951 hsa-miR-11181-3p 0 1 0
chrX:1293736|1293951 hsa-miR-6754-3p 0 1 0
chrX:1293736|1293951 hsa-miR-6780b-5p 0 1 0
chrX:1293736|1293951 hsa-miR-6773-5p 0 1 0
chrX:1293736|1293951 hsa-miR-378a-3p 0 1 0
chrX:1293736|1293951 hsa-miR-1185-1-3p 0 1 0
chrX:1293736|1293951 hsa-miR-1185-2-3p 1 1 0
chrX:1293736|1293951 hsa-miR-6805-3p 1 0 0
chrX:1293736|1293951 hsa-miR-6775-3p 0 1 0
chrX:1293736|1293951 hsa-miR-4482-5p 0 1 0
chrX:1293736|1293951 hsa-miR-412-3p 0 1 0
chrX:1293736|1293951 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:1293736|1293951
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MSTLGPGGGGAESSPVYTGSRWRWGRVSSCLHSVQVDVD
Nucleotide Sequence CTGTCTACACTGGGTCCAGGTGGAGGTGGTGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTCGGTCCAGGTGGATGTGGACTAG

CircID chrX:1293736|1293951
ORF Type ORF2
Protein Length 70
Nucleotide Length 210
Protein Sequence MSTLGPGGDGAESSPVYTGSRWRWGRVSSCLHWVQVEVVQSLLLSTLGPGGGGAGSPPVYTRSRWMWTRD
Nucleotide Sequence TTGTCTACGCTGGGTCCAGGTGGAGATGGGGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGTGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTCGGTCCAGGTGGATGTGGACTAGGGAC

CircID chrX:1293736|1293951
ORF Type ORF3
Protein Length 62
Nucleotide Length 186
Protein Sequence MGQSLLLSTLGPGGGGAGSPPVYTGSRWRWCRVFSCLHWVQVEVGQGLLLSTLGPGGCGLGT
Nucleotide Sequence ATGGGGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGTGCAGAGTCTTCTCCTGTCTACACTGGGTCCAGGTGGAGGTGGGGCAGGGTCTCCTCCTGTCTACACTCGGTCCAGGTGGATGTGGACTAGGGACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites