CircRNA Information

General Information
circRNA Basic Information
CircID chrX:129591190|129591348
Strand +
CircType exon
Host Gene ENSG00000122126.14;
Algorism CIRI2;
Sequence CCTTTATGTGAAGGAGCTGGTTGTAGAGCCCAGAGTCAGTCCTGCTGAGGAAGGAGGTGACATCTGCCCTTGGTATTTCAGAAGACCAGAGAATGGATTCTAAGGGTCATCCACAATACCTTTGCTGTGGGAAGGAGCAATAGCTCTAGATGGGCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:129591190|129591348 hsa-miR-23a-5p 0 0 1
chrX:129591190|129591348 hsa-miR-23a-3p 0 0 1
chrX:129591190|129591348 hsa-miR-205-5p 0 0 1
chrX:129591190|129591348 hsa-miR-205-3p 0 0 1
chrX:129591190|129591348 hsa-miR-214-5p 0 0 1
chrX:129591190|129591348 hsa-miR-214-3p 0 0 1
chrX:129591190|129591348 hsa-miR-23b-5p 0 0 1
chrX:129591190|129591348 hsa-miR-23b-3p 0 0 1
chrX:129591190|129591348 hsa-miR-137-5p 0 0 1
chrX:129591190|129591348 hsa-miR-137-3p 0 0 1
chrX:129591190|129591348 hsa-miR-326 0 1 1
chrX:129591190|129591348 hsa-miR-345-5p 0 0 1
chrX:129591190|129591348 hsa-miR-345-3p 0 0 1
chrX:129591190|129591348 hsa-miR-504-5p 0 0 1
chrX:129591190|129591348 hsa-miR-504-3p 0 0 1
chrX:129591190|129591348 hsa-miR-545-5p 0 0 1
chrX:129591190|129591348 hsa-miR-545-3p 0 0 1
chrX:129591190|129591348 hsa-miR-612 1 0 1
chrX:129591190|129591348 hsa-miR-922 0 0 1
chrX:129591190|129591348 hsa-miR-1286 0 0 1
chrX:129591190|129591348 hsa-miR-1255a 0 0 1
chrX:129591190|129591348 hsa-miR-548m 0 1 1
chrX:129591190|129591348 hsa-miR-1283 0 0 1
chrX:129591190|129591348 hsa-miR-188-3p 0 1 1
chrX:129591190|129591348 hsa-miR-518d-5p 0 0 1
chrX:129591190|129591348 hsa-miR-519b-5p 0 0 1
chrX:129591190|129591348 hsa-miR-519c-5p 0 0 1
chrX:129591190|129591348 hsa-miR-520c-5p 0 0 1
chrX:129591190|129591348 hsa-miR-330-5p 0 1 1
chrX:129591190|129591348 hsa-miR-1260 0 0 1
chrX:129591190|129591348 hsa-miR-1255b 0 0 1
chrX:129591190|129591348 hsa-miR-1285 0 0 1
chrX:129591190|129591348 hsa-miR-526a 0 0 1
chrX:129591190|129591348 hsa-miR-761 0 1 0
chrX:129591190|129591348 hsa-miR-3169 0 1 0
chrX:129591190|129591348 hsa-miR-4291 0 1 0
chrX:129591190|129591348 hsa-miR-378g 0 1 0
chrX:129591190|129591348 hsa-miR-4448 0 1 0
chrX:129591190|129591348 hsa-miR-4513 1 0 0
chrX:129591190|129591348 hsa-miR-4515 1 0 0
chrX:129591190|129591348 hsa-miR-4656 1 0 0
chrX:129591190|129591348 hsa-miR-4678 0 1 0
chrX:129591190|129591348 hsa-miR-4747-3p 1 0 0
chrX:129591190|129591348 hsa-miR-4700-3p 1 1 0
chrX:129591190|129591348 hsa-miR-6822-3p 0 1 0
chrX:129591190|129591348 hsa-miR-6753-5p 1 0 0
chrX:129591190|129591348 hsa-miR-3691-5p 0 1 0
chrX:129591190|129591348 hsa-miR-3667-3p 0 1 0
chrX:129591190|129591348 hsa-miR-4740-5p 1 1 0
chrX:129591190|129591348 hsa-miR-3120-3p 0 1 0
chrX:129591190|129591348 hsa-miR-4778-3p 0 1 0
chrX:129591190|129591348 hsa-miR-6792-5p 1 0 0
chrX:129591190|129591348 hsa-miR-514a-5p 0 1 0
chrX:129591190|129591348 hsa-miR-6735-5p 0 1 0
chrX:129591190|129591348 hsa-miR-7843-5p 0 1 0
chrX:129591190|129591348 hsa-miR-518f-5p 0 1 0
chrX:129591190|129591348 hsa-miR-6824-3p 0 1 0
chrX:129591190|129591348 hsa-miR-6811-5p 0 1 0
chrX:129591190|129591348 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:129591190|129591348
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MPLVFQKTREWILRVIHNTFAVGRSNSSRWAC
Nucleotide Sequence CTGCCCTTGGTATTTCAGAAGACCAGAGAATGGATTCTAAGGGTCATCCACAATACCTTTGCTGTGGGAAGGAGCAATAGCTCTAGATGGGCCTGC

CircID chrX:129591190|129591348
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MVVEPRVSPAEEGGDICPWYFRRPENGF
Nucleotide Sequence CTGGTTGTAGAGCCCAGAGTCAGTCCTGCTGAGGAAGGAGGTGACATCTGCCCTTGGTATTTCAGAAGACCAGAGAATGGATTCTAA

CircID chrX:129591190|129591348
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MLRKEVTSALGISEDQRMDSKGHPQYLCCGKEQ
Nucleotide Sequence CTGCTGAGGAAGGAGGTGACATCTGCCCTTGGTATTTCAGAAGACCAGAGAATGGATTCTAAGGGTCATCCACAATACCTTTGCTGTGGGAAGGAGCAATAG

CircID chrX:129591190|129591348
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MKYQGQMSPPSSAGLTLGSTTSSFT
Nucleotide Sequence CTGAAATACCAAGGGCAGATGTCACCTCCTTCCTCAGCAGGACTGACTCTGGGCTCTACAACCAGCTCCTTCACATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites