CircRNA Information

General Information
circRNA Basic Information
CircID chrX:130165558|130165724
Strand +
CircType exon
Host Gene ENSG00000156709.12;
Algorism CIRI2;
Sequence GGTGTTTGACCCGTCGGTCGTGCGTGAGAGGAAAGGGAAGGAGGAGGTCCCGAATAGCGGTCGCCGAAATGTTCCGGTGTGGAGGCCTGGCGGCGGGTGCTTTGAAGCAGAAGCTGGTGCCCTTGGTGCGGACCGTGTGCGTCCGAAGCCCGAGGCAGAGGAACCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:130165558|130165724 hsa-miR-204-5p 0 0 1
chrX:130165558|130165724 hsa-miR-204-3p 0 0 1
chrX:130165558|130165724 hsa-miR-211-5p 0 0 1
chrX:130165558|130165724 hsa-miR-211-3p 0 0 1
chrX:130165558|130165724 hsa-miR-623 0 0 1
chrX:130165558|130165724 hsa-miR-1226-5p 0 0 1
chrX:130165558|130165724 hsa-miR-1226-3p 0 0 1
chrX:130165558|130165724 hsa-miR-1238-5p 0 0 1
chrX:130165558|130165724 hsa-miR-1238-3p 0 0 1
chrX:130165558|130165724 hsa-miR-330-3p 0 1 1
chrX:130165558|130165724 hsa-miR-671-3p 0 0 1
chrX:130165558|130165724 hsa-miR-220a 0 0 1
chrX:130165558|130165724 hsa-miR-638 1 0 0
chrX:130165558|130165724 hsa-miR-1281 1 0 0
chrX:130165558|130165724 hsa-miR-4326 0 1 0
chrX:130165558|130165724 hsa-miR-4290 1 0 0
chrX:130165558|130165724 hsa-miR-4634 1 0 0
chrX:130165558|130165724 hsa-miR-4673 1 0 0
chrX:130165558|130165724 hsa-miR-4767 1 0 0
chrX:130165558|130165724 hsa-miR-5193 1 1 0
chrX:130165558|130165724 hsa-miR-5705 0 1 0
chrX:130165558|130165724 hsa-miR-6070 0 1 0
chrX:130165558|130165724 hsa-miR-6084 1 0 0
chrX:130165558|130165724 hsa-miR-9899 1 0 0
chrX:130165558|130165724 hsa-miR-4755-3p 0 1 0
chrX:130165558|130165724 hsa-miR-593-5p 0 1 0
chrX:130165558|130165724 hsa-miR-877-3p 1 0 0
chrX:130165558|130165724 hsa-miR-1908-3p 1 0 0
chrX:130165558|130165724 hsa-miR-3667-3p 1 0 0
chrX:130165558|130165724 hsa-miR-6821-3p 1 0 0
chrX:130165558|130165724 hsa-miR-6861-3p 1 1 0
chrX:130165558|130165724 hsa-miR-7111-3p 1 0 0
chrX:130165558|130165724 hsa-miR-4667-3p 1 0 0
chrX:130165558|130165724 hsa-miR-1236-3p 1 1 0
chrX:130165558|130165724 hsa-miR-6871-3p 0 1 0
chrX:130165558|130165724 hsa-miR-6872-3p 1 0 0
chrX:130165558|130165724 hsa-miR-6746-3p 1 0 0
chrX:130165558|130165724 hsa-miR-5088-3p 1 0 0
chrX:130165558|130165724 hsa-miR-3124-3p 0 1 0
chrX:130165558|130165724 hsa-miR-130b-5p 1 0 0
chrX:130165558|130165724 hsa-miR-6734-3p 1 1 0
chrX:130165558|130165724 hsa-miR-6789-3p 1 0 0
chrX:130165558|130165724 hsa-miR-4727-5p 1 0 0
chrX:130165558|130165724 hsa-miR-320a-5p 1 1 0
chrX:130165558|130165724 hsa-miR-4685-5p 1 0 0
chrX:130165558|130165724 hsa-miR-6791-3p 1 0 0
chrX:130165558|130165724 hsa-miR-6756-3p 1 0 0
chrX:130165558|130165724 hsa-miR-6829-3p 1 0 0
chrX:130165558|130165724 hsa-miR-9851-3p 0 1 0
chrX:130165558|130165724 hsa-miR-3059-5p 0 1 0
chrX:130165558|130165724 hsa-miR-6781-3p 1 0 0
chrX:130165558|130165724 hsa-miR-5006-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:130165558|130165724
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MTRRSCVRGKGRRRSRIAVAEMFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNR
Nucleotide Sequence TTGACCCGTCGGTCGTGCGTGAGAGGAAAGGGAAGGAGGAGGTCCCGAATAGCGGTCGCCGAAATGTTCCGGTGTGGAGGCCTGGCGGCGGGTGCTTTGAAGCAGAAGCTGGTGCCCTTGGTGCGGACCGTGTGCGTCCGAAGCCCGAGGCAGAGGAACCGG

CircID chrX:130165558|130165724
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MPRASDAHGPHQGHQLLLQSTRRQASTPEHFGDRYSGPPPSLSSHARPTGQT
Nucleotide Sequence CTGCCTCGGGCTTCGGACGCACACGGTCCGCACCAAGGGCACCAGCTTCTGCTTCAAAGCACCCGCCGCCAGGCCTCCACACCGGAACATTTCGGCGACCGCTATTCGGGACCTCCTCCTTCCCTTTCCTCTCACGCACGACCGACGGGTCAAACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites