CircRNA Information

General Information
circRNA Basic Information
CircID chrX:130783547|130809261
Strand -
CircType exon
Host Gene ENSG00000165675.15;
Algorism CIRI2;
Sequence CTGAAGGAGTATTTGTTCTCTTTCTTTTCTTGCTTGATTCCCCTCCATTCTCAATGAGGCCTTCTGTGACCAGAGGGCCACTGGCACTACCAAACTGCAGGGGCTCGTTGTTGTTAGCAGGGTCAAAGGGCAGCTGGTTCAATCCTGAAGATATCAGAAAATTACAATTTGTTTCATCTTTGTTGGTAGCTGCACTAGCTGTTCCATTACAGAGGAGGAGTTGATTTATGTGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:130783547|130809261 hsa-miR-22-5p 0 0 1
chrX:130783547|130809261 hsa-miR-22-3p 0 0 1
chrX:130783547|130809261 hsa-miR-205-5p 0 0 1
chrX:130783547|130809261 hsa-miR-205-3p 0 0 1
chrX:130783547|130809261 hsa-miR-130a-5p 0 0 1
chrX:130783547|130809261 hsa-miR-130a-3p 0 0 1
chrX:130783547|130809261 hsa-miR-301a-5p 0 0 1
chrX:130783547|130809261 hsa-miR-301a-3p 0 0 1
chrX:130783547|130809261 hsa-miR-130b-5p 0 0 1
chrX:130783547|130809261 hsa-miR-130b-3p 0 0 1
chrX:130783547|130809261 hsa-miR-328-5p 0 0 1
chrX:130783547|130809261 hsa-miR-328-3p 0 0 1
chrX:130783547|130809261 hsa-miR-494-5p 0 0 1
chrX:130783547|130809261 hsa-miR-494-3p 0 0 1
chrX:130783547|130809261 hsa-miR-519e-5p 0 0 1
chrX:130783547|130809261 hsa-miR-519e-3p 0 0 1
chrX:130783547|130809261 hsa-miR-504-5p 0 0 1
chrX:130783547|130809261 hsa-miR-504-3p 0 0 1
chrX:130783547|130809261 hsa-miR-580-5p 0 0 1
chrX:130783547|130809261 hsa-miR-580-3p 0 0 1
chrX:130783547|130809261 hsa-miR-1301-5p 0 0 1
chrX:130783547|130809261 hsa-miR-1301-3p 0 0 1
chrX:130783547|130809261 hsa-miR-454-5p 0 0 1
chrX:130783547|130809261 hsa-miR-454-3p 0 0 1
chrX:130783547|130809261 hsa-miR-301b-5p 0 0 1
chrX:130783547|130809261 hsa-miR-301b-3p 0 0 1
chrX:130783547|130809261 hsa-miR-938 0 0 1
chrX:130783547|130809261 hsa-miR-663b 0 0 1
chrX:130783547|130809261 hsa-miR-1291 0 0 1
chrX:130783547|130809261 hsa-miR-1225-3p 1 1 1
chrX:130783547|130809261 hsa-miR-515-3p 0 0 1
chrX:130783547|130809261 hsa-miR-590-3p 0 0 1
chrX:130783547|130809261 hsa-miR-1300 0 0 1
chrX:130783547|130809261 hsa-miR-371-3p 0 0 1
chrX:130783547|130809261 hsa-miR-621 0 1 0
chrX:130783547|130809261 hsa-miR-623 1 0 0
chrX:130783547|130809261 hsa-miR-4311 0 1 0
chrX:130783547|130809261 hsa-miR-4534 1 0 0
chrX:130783547|130809261 hsa-miR-5693 0 1 0
chrX:130783547|130809261 hsa-miR-12115 0 1 0
chrX:130783547|130809261 hsa-miR-12122 0 1 0
chrX:130783547|130809261 hsa-miR-18a-3p 0 1 0
chrX:130783547|130809261 hsa-miR-6809-5p 0 1 0
chrX:130783547|130809261 hsa-miR-2467-5p 1 0 0
chrX:130783547|130809261 hsa-miR-5008-5p 1 0 0
chrX:130783547|130809261 hsa-miR-6858-3p 1 0 0
chrX:130783547|130809261 hsa-miR-6830-5p 0 1 0
chrX:130783547|130809261 hsa-miR-4640-3p 1 0 0
chrX:130783547|130809261 hsa-miR-6720-3p 1 0 0
chrX:130783547|130809261 hsa-miR-3944-5p 0 1 0
chrX:130783547|130809261 hsa-miR-2276-5p 0 1 0
chrX:130783547|130809261 hsa-miR-6509-5p 1 1 0
chrX:130783547|130809261 hsa-miR-5003-5p 1 0 0
chrX:130783547|130809261 hsa-miR-4728-5p 1 0 0
chrX:130783547|130809261 hsa-miR-6777-5p 1 0 0
chrX:130783547|130809261 hsa-miR-6739-5p 0 1 0
chrX:130783547|130809261 hsa-miR-6799-3p 1 0 0
chrX:130783547|130809261 hsa-miR-1271-3p 1 0 0
chrX:130783547|130809261 hsa-miR-6877-3p 1 0 0
chrX:130783547|130809261 hsa-miR-6891-5p 1 0 0
chrX:130783547|130809261 hsa-miR-6750-5p 1 0 0
chrX:130783547|130809261 hsa-miR-375-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:130783547|130809261
ORF Type ORF1
Protein Length 64
Nucleotide Length 195
Protein Sequence MLDSPPFSMRPSVTRGPLALPNCRGSLLLAGSKGSWFNPEDIRKLQFVSSLLVAALAVPLQRRS
Nucleotide Sequence TTGCTTGATTCCCCTCCATTCTCAATGAGGCCTTCTGTGACCAGAGGGCCACTGGCACTACCAAACTGCAGGGGCTCGTTGTTGTTAGCAGGGTCAAAGGGCAGCTGGTTCAATCCTGAAGATATCAGAAAATTACAATTTGTTTCATCTTTGTTGGTAGCTGCACTAGCTGTTCCATTACAGAGGAGGAGTTGA

CircID chrX:130783547|130809261
ORF Type ORF2
Protein Length 78
Nucleotide Length 234
Protein Sequence LHINQLLLCNGTASAATNKDETNCNFLISSGLNQLPFDPANNNEPLQFGSASGPLVTEGLIENGGESSKKRKRTNTPS
Nucleotide Sequence CTGCACATAAATCAACTCCTCCTCTGTAATGGAACAGCTAGTGCAGCTACCAACAAAGATGAAACAAATTGTAATTTTCTGATATCTTCAGGATTGAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCACAGAAGGCCTCATTGAGAATGGAGGGGAATCAAGCAAGAAAAGAAAGAGAACAAATACTCCTTCA

CircID chrX:130783547|130809261
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MTLLTTTSPCSLVVPVALWSQKASLRMEGNQARKEREQILLQ
Nucleotide Sequence TTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCACAGAAGGCCTCATTGAGAATGGAGGGGAATCAAGCAAGAAAAGAAAGAGAACAAATACTCCTTCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites