CircRNA Information

General Information
circRNA Basic Information
CircID chrX:132054631|132054861
Strand +
CircType exon
Host Gene ENSG00000134602.14;
Algorism CIRI2;
Sequence CTTTAAATATGACCCATAGTATTTTGTTACATATGAGCTGTCACATTGACTCAAGACAGTTATTTCTTGCTGAATGTCTTCTATTTCATCTTCGGCTTCCTCAAGGTCTATGATTTTAATAGCAACGACTTGCTGGGTACGGTTATCAATTCCTTTGAAAACTTCCCCAAATGAGCCTTTCCCAATGCGCTCTAATTTTGTGAACAGTTCTTCTGGATCAGCTATGTTATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:132054631|132054861 hsa-miR-181c-5p 0 0 1
chrX:132054631|132054861 hsa-miR-181c-3p 0 0 1
chrX:132054631|132054861 hsa-miR-380-5p 0 0 1
chrX:132054631|132054861 hsa-miR-380-3p 0 0 1
chrX:132054631|132054861 hsa-miR-431-5p 0 0 1
chrX:132054631|132054861 hsa-miR-431-3p 0 0 1
chrX:132054631|132054861 hsa-miR-376b-5p 0 0 1
chrX:132054631|132054861 hsa-miR-376b-3p 0 0 1
chrX:132054631|132054861 hsa-miR-495-5p 0 0 1
chrX:132054631|132054861 hsa-miR-495-3p 0 0 1
chrX:132054631|132054861 hsa-miR-181d-5p 0 0 1
chrX:132054631|132054861 hsa-miR-181d-3p 0 0 1
chrX:132054631|132054861 hsa-miR-526b-5p 0 0 1
chrX:132054631|132054861 hsa-miR-526b-3p 0 0 1
chrX:132054631|132054861 hsa-miR-545-5p 0 0 1
chrX:132054631|132054861 hsa-miR-545-3p 0 0 1
chrX:132054631|132054861 hsa-miR-579-5p 0 0 1
chrX:132054631|132054861 hsa-miR-579-3p 0 0 1
chrX:132054631|132054861 hsa-miR-607 0 0 1
chrX:132054631|132054861 hsa-miR-627-5p 0 0 1
chrX:132054631|132054861 hsa-miR-627-3p 0 0 1
chrX:132054631|132054861 hsa-miR-640 0 1 1
chrX:132054631|132054861 hsa-miR-641 0 0 1
chrX:132054631|132054861 hsa-miR-1305 0 0 1
chrX:132054631|132054861 hsa-miR-1279 0 0 1
chrX:132054631|132054861 hsa-miR-513b-5p 0 0 1
chrX:132054631|132054861 hsa-miR-513b-3p 0 0 1
chrX:132054631|132054861 hsa-miR-671-5p 1 1 1
chrX:132054631|132054861 hsa-miR-1224-5p 0 0 1
chrX:132054631|132054861 hsa-miR-542-3p 0 0 1
chrX:132054631|132054861 hsa-miR-181a 0 0 1
chrX:132054631|132054861 hsa-miR-181b 0 0 1
chrX:132054631|132054861 hsa-miR-376a 0 0 1
chrX:132054631|132054861 hsa-miR-194 0 0 1
chrX:132054631|132054861 hsa-miR-451 0 0 1
chrX:132054631|132054861 hsa-miR-198 1 0 0
chrX:132054631|132054861 hsa-miR-3125 1 0 0
chrX:132054631|132054861 hsa-miR-3915 0 1 0
chrX:132054631|132054861 hsa-miR-4501 0 1 0
chrX:132054631|132054861 hsa-miR-4511 0 1 0
chrX:132054631|132054861 hsa-miR-8066 0 1 0
chrX:132054631|132054861 hsa-miR-12115 1 0 0
chrX:132054631|132054861 hsa-miR-6825-5p 1 0 0
chrX:132054631|132054861 hsa-miR-6089 1 0 0
chrX:132054631|132054861 hsa-miR-3605-5p 1 0 0
chrX:132054631|132054861 hsa-miR-5088-5p 1 0 0
chrX:132054631|132054861 hsa-miR-1229-5p 1 0 0
chrX:132054631|132054861 hsa-miR-937-5p 0 1 0
chrX:132054631|132054861 hsa-miR-6886-5p 1 0 0
chrX:132054631|132054861 hsa-miR-525-5p 1 0 0
chrX:132054631|132054861 hsa-miR-942-3p 0 1 0
chrX:132054631|132054861 hsa-miR-6505-5p 1 1 0
chrX:132054631|132054861 hsa-miR-6870-5p 1 0 0
chrX:132054631|132054861 hsa-miR-6780b-5p 1 1 0
chrX:132054631|132054861 hsa-miR-4725-3p 1 1 0
chrX:132054631|132054861 hsa-miR-4726-5p 1 0 0
chrX:132054631|132054861 hsa-miR-6831-5p 1 0 0
chrX:132054631|132054861 hsa-miR-30c-1-3p 0 1 0
chrX:132054631|132054861 hsa-miR-10398-3p 1 0 0
chrX:132054631|132054861 hsa-miR-99b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:132054631|132054861
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MTQDSYFLLNVFYFIFGFLKVYDFNSNDLLGTVINSFENFPK
Nucleotide Sequence TTGACTCAAGACAGTTATTTCTTGCTGAATGTCTTCTATTTCATCTTCGGCTTCCTCAAGGTCTATGATTTTAATAGCAACGACTTGCTGGGTACGGTTATCAATTCCTTTGAAAACTTCCCCAAATGA

CircID chrX:132054631|132054861
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MSSISSSASSRSMILIATTCWVRLSIPLKTSPNEPFPMRSNFVNSSSGSAML
Nucleotide Sequence ATGTCTTCTATTTCATCTTCGGCTTCCTCAAGGTCTATGATTTTAATAGCAACGACTTGCTGGGTACGGTTATCAATTCCTTTGAAAACTTCCCCAAATGAGCCTTTCCCAATGCGCTCTAATTTTGTGAACAGTTCTTCTGGATCAGCTATGTTA

CircID chrX:132054631|132054861
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MTHSILLHMSCHIDSRQLFLAECLLFHLRLPQGL
Nucleotide Sequence ATGACCCATAGTATTTTGTTACATATGAGCTGTCACATTGACTCAAGACAGTTATTTCTTGCTGAATGTCTTCTATTTCATCTTCGGCTTCCTCAAGGTCTATGA

CircID chrX:132054631|132054861
ORF Type ORF4
Protein Length 69
Nucleotide Length 207
Protein Sequence MFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLK
Nucleotide Sequence CTGTTCACAAAATTAGAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAAATCATAGACCTTGAGGAAGCCGAAGATGAAATAGAAGACATTCAGCAAGAAATAACTGTCTTGAGTCAATGTGACAGCTCATATGTAACAAAATACTATGGGTCATATTTAAAG

CircID chrX:132054631|132054861
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MGKAHLGKFSKELITVPSKSLLLKS
Nucleotide Sequence TTGGGAAAGGCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAAATCATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites