CircRNA Information

General Information
circRNA Basic Information
CircID chrX:136511783|136511939
Strand +
CircType exon
Host Gene ENSG00000102241.10;
Algorism CIRI2;
Sequence TCCCAAAACCACCCAAAGTCCCCCTCTCATCAGAATCGTCAAACAACTTCTCACTGGAATCTTCCTCCTCATCAAACAACTTCTCATTGGAATCATCATCTTCGAACAACTTTTCGTCAGCATCTTCAACTTCCTTTCCATCTGCATCTTCATCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:136511783|136511939 hsa-miR-375-5p 0 0 1
chrX:136511783|136511939 hsa-miR-375-3p 0 0 1
chrX:136511783|136511939 hsa-miR-382-5p 0 0 1
chrX:136511783|136511939 hsa-miR-382-3p 0 0 1
chrX:136511783|136511939 hsa-miR-1293 0 1 1
chrX:136511783|136511939 hsa-miR-1253 0 0 1
chrX:136511783|136511939 hsa-miR-1262 0 0 1
chrX:136511783|136511939 hsa-miR-1272 0 0 1
chrX:136511783|136511939 hsa-miR-1825 0 0 1
chrX:136511783|136511939 hsa-miR-145-5p 0 0 1
chrX:136511783|136511939 hsa-miR-199a-5p 0 0 1
chrX:136511783|136511939 hsa-miR-876-3p 0 0 1
chrX:136511783|136511939 hsa-miR-628-5p 0 0 1
chrX:136511783|136511939 hsa-miR-199b-5p 0 0 1
chrX:136511783|136511939 hsa-miR-1300 0 0 1
chrX:136511783|136511939 hsa-miR-608 0 1 0
chrX:136511783|136511939 hsa-miR-658 1 0 0
chrX:136511783|136511939 hsa-miR-3138 1 0 0
chrX:136511783|136511939 hsa-miR-3154 1 0 0
chrX:136511783|136511939 hsa-miR-4271 1 0 0
chrX:136511783|136511939 hsa-miR-4450 1 0 0
chrX:136511783|136511939 hsa-miR-3689c 1 0 0
chrX:136511783|136511939 hsa-miR-4525 1 0 0
chrX:136511783|136511939 hsa-miR-4533 1 0 0
chrX:136511783|136511939 hsa-miR-4647 1 0 0
chrX:136511783|136511939 hsa-miR-4689 1 0 0
chrX:136511783|136511939 hsa-miR-4739 1 0 0
chrX:136511783|136511939 hsa-miR-5191 1 0 0
chrX:136511783|136511939 hsa-miR-5194 1 0 0
chrX:136511783|136511939 hsa-miR-5698 1 0 0
chrX:136511783|136511939 hsa-miR-6088 1 0 0
chrX:136511783|136511939 hsa-miR-6127 1 0 0
chrX:136511783|136511939 hsa-miR-6133 1 0 0
chrX:136511783|136511939 hsa-miR-7150 1 0 0
chrX:136511783|136511939 hsa-miR-9718 1 0 0
chrX:136511783|136511939 hsa-miR-4433b-3p 1 0 0
chrX:136511783|136511939 hsa-miR-6734-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6765-5p 1 0 0
chrX:136511783|136511939 hsa-miR-3150a-3p 1 0 0
chrX:136511783|136511939 hsa-miR-7106-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6894-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6799-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6728-5p 1 0 0
chrX:136511783|136511939 hsa-miR-8071 1 0 0
chrX:136511783|136511939 hsa-miR-766-5p 0 1 0
chrX:136511783|136511939 hsa-miR-7847-3p 1 0 0
chrX:136511783|136511939 hsa-miR-4722-5p 1 0 0
chrX:136511783|136511939 hsa-miR-3605-5p 1 1 0
chrX:136511783|136511939 hsa-miR-6871-5p 1 0 0
chrX:136511783|136511939 hsa-miR-3180-3p 1 0 0
chrX:136511783|136511939 hsa-miR-6732-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6805-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6798-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6760-5p 1 0 0
chrX:136511783|136511939 hsa-miR-1229-5p 1 0 0
chrX:136511783|136511939 hsa-miR-1228-5p 1 0 0
chrX:136511783|136511939 hsa-miR-3202 1 0 0
chrX:136511783|136511939 hsa-miR-149-3p 1 0 0
chrX:136511783|136511939 hsa-miR-3689b-3p 1 0 0
chrX:136511783|136511939 hsa-miR-4763-3p 1 0 0
chrX:136511783|136511939 hsa-miR-6870-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6893-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6756-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6819-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6851-5p 1 0 0
chrX:136511783|136511939 hsa-miR-11181-3p 1 0 0
chrX:136511783|136511939 hsa-miR-1249-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6779-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6780a-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6797-5p 1 0 0
chrX:136511783|136511939 hsa-miR-7111-5p 1 0 0
chrX:136511783|136511939 hsa-miR-4728-5p 1 0 0
chrX:136511783|136511939 hsa-miR-5196-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6780b-5p 1 0 0
chrX:136511783|136511939 hsa-miR-10526-3p 1 0 0
chrX:136511783|136511939 hsa-miR-328-5p 1 0 0
chrX:136511783|136511939 hsa-miR-3689a-3p 1 0 0
chrX:136511783|136511939 hsa-miR-4725-3p 1 0 0
chrX:136511783|136511939 hsa-miR-4745-5p 1 0 0
chrX:136511783|136511939 hsa-miR-675-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6794-5p 1 1 0
chrX:136511783|136511939 hsa-miR-6795-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6846-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6848-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6858-5p 1 1 0
chrX:136511783|136511939 hsa-miR-6883-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6887-5p 1 0 0
chrX:136511783|136511939 hsa-miR-939-5p 1 0 0
chrX:136511783|136511939 hsa-miR-1238-5p 1 0 0
chrX:136511783|136511939 hsa-miR-4758-5p 1 0 0
chrX:136511783|136511939 hsa-miR-365a-5p 1 1 0
chrX:136511783|136511939 hsa-miR-365b-5p 1 1 0
chrX:136511783|136511939 hsa-miR-6758-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6856-5p 1 0 0
chrX:136511783|136511939 hsa-miR-1914-3p 1 0 0
chrX:136511783|136511939 hsa-miR-4665-5p 1 0 0
chrX:136511783|136511939 hsa-miR-4646-5p 1 0 0
chrX:136511783|136511939 hsa-miR-4716-3p 1 1 0
chrX:136511783|136511939 hsa-miR-6785-5p 1 0 0
chrX:136511783|136511939 hsa-miR-6884-5p 1 0 0
chrX:136511783|136511939 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:136511783|136511939
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MESSSSSNNFSLESSSSNNFSSASSTSFPSASSS
Nucleotide Sequence CTGGAATCTTCCTCCTCATCAAACAACTTCTCATTGGAATCATCATCTTCGAACAACTTTTCGTCAGCATCTTCAACTTCCTTTCCATCTGCATCTTCATCT
CircID chrX:136511783|136511939
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MFEDDDSNEKLFDEEEDSSEKLFDDSDERGTLGGFG
Nucleotide Sequence TTGTTCGAAGATGATGATTCCAATGAGAAGTTGTTTGATGAGGAGGAAGATTCCAGTGAGAAGTTGTTTGACGATTCTGATGAGAGGGGGACTTTGGGTGGTTTTGGG
CircID chrX:136511783|136511939
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MKMQMERKLKMLTKSCSKMMIPMRSCLMRRKIPVRSCLTILMRGGLWVVLG
Nucleotide Sequence ATGAAGATGCAGATGGAAAGGAAGTTGAAGATGCTGACGAAAAGTTGTTCGAAGATGATGATTCCAATGAGAAGTTGTTTGATGAGGAGGAAGATTCCAGTGAGAAGTTGTTTGACGATTCTGATGAGAGGGGGACTTTGGGTGGTTTTGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab