CircRNA Information

General Information
circRNA Basic Information
CircID chrX:1385849|1386010
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCTGGGGCACAGAGGGCAGGGTCACAGCTGGGAAGAGGCGGGGGGTAGAAACCAAGGCTGGCAGAAGTGTAGCCGGGCTCCCTGATAAATGCTGGAGGACCCCAGGGCACCTGCACTTACTGTACCCTCTCTGAGAGCATTTGTATGATCTCATGTCTCAG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:1385849|1386010 hsa-miR-144-5p 0 0 1
chrX:1385849|1386010 hsa-miR-144-3p 0 0 1
chrX:1385849|1386010 hsa-miR-302a-5p 0 0 1
chrX:1385849|1386010 hsa-miR-302a-3p 0 0 1
chrX:1385849|1386010 hsa-miR-302b-5p 0 0 1
chrX:1385849|1386010 hsa-miR-302b-3p 0 0 1
chrX:1385849|1386010 hsa-miR-302c-5p 0 0 1
chrX:1385849|1386010 hsa-miR-302c-3p 0 0 1
chrX:1385849|1386010 hsa-miR-302d-5p 0 0 1
chrX:1385849|1386010 hsa-miR-302d-3p 0 0 1
chrX:1385849|1386010 hsa-miR-372-5p 0 0 1
chrX:1385849|1386010 hsa-miR-372-3p 0 0 1
chrX:1385849|1386010 hsa-miR-373-5p 0 0 1
chrX:1385849|1386010 hsa-miR-373-3p 0 0 1
chrX:1385849|1386010 hsa-miR-487a-5p 0 0 1
chrX:1385849|1386010 hsa-miR-487a-3p 0 0 1
chrX:1385849|1386010 hsa-miR-520e-5p 0 0 1
chrX:1385849|1386010 hsa-miR-520e-3p 0 0 1
chrX:1385849|1386010 hsa-miR-520b-5p 0 0 1
chrX:1385849|1386010 hsa-miR-520b-3p 0 0 1
chrX:1385849|1386010 hsa-miR-504-5p 0 0 1
chrX:1385849|1386010 hsa-miR-504-3p 0 0 1
chrX:1385849|1386010 hsa-miR-657 0 0 1
chrX:1385849|1386010 hsa-miR-766-5p 0 0 1
chrX:1385849|1386010 hsa-miR-766-3p 0 0 1
chrX:1385849|1386010 hsa-miR-874-5p 0 0 1
chrX:1385849|1386010 hsa-miR-874-3p 0 0 1
chrX:1385849|1386010 hsa-miR-1236-5p 0 0 1
chrX:1385849|1386010 hsa-miR-1236-3p 0 0 1
chrX:1385849|1386010 hsa-miR-1202 0 0 1
chrX:1385849|1386010 hsa-miR-302e 0 0 1
chrX:1385849|1386010 hsa-miR-615-5p 1 0 1
chrX:1385849|1386010 hsa-miR-361-5p 0 0 1
chrX:1385849|1386010 hsa-miR-146b-3p 0 0 1
chrX:1385849|1386010 hsa-miR-338-3p 0 0 1
chrX:1385849|1386010 hsa-miR-485-3p 0 1 1
chrX:1385849|1386010 hsa-miR-520d-3p 0 0 1
chrX:1385849|1386010 hsa-miR-519b-3p 0 0 1
chrX:1385849|1386010 hsa-miR-519c-3p 0 0 1
chrX:1385849|1386010 hsa-miR-520a-3p 0 0 1
chrX:1385849|1386010 hsa-miR-520c-3p 0 0 1
chrX:1385849|1386010 hsa-miR-105 0 0 1
chrX:1385849|1386010 hsa-miR-519a 0 0 1
chrX:1385849|1386010 hsa-miR-101 0 0 1
chrX:1385849|1386010 hsa-miR-326 1 0 0
chrX:1385849|1386010 hsa-miR-346 1 0 0
chrX:1385849|1386010 hsa-miR-596 1 0 0
chrX:1385849|1386010 hsa-miR-631 1 0 0
chrX:1385849|1386010 hsa-miR-661 1 0 0
chrX:1385849|1386010 hsa-miR-764 1 1 0
chrX:1385849|1386010 hsa-miR-663b 1 0 0
chrX:1385849|1386010 hsa-miR-1470 1 0 0
chrX:1385849|1386010 hsa-miR-1913 1 0 0
chrX:1385849|1386010 hsa-miR-1976 1 0 0
chrX:1385849|1386010 hsa-miR-4270 0 1 0
chrX:1385849|1386010 hsa-miR-3907 1 0 0
chrX:1385849|1386010 hsa-miR-4522 1 0 0
chrX:1385849|1386010 hsa-miR-5694 0 1 0
chrX:1385849|1386010 hsa-miR-7974 1 1 0
chrX:1385849|1386010 hsa-miR-12128 0 1 0
chrX:1385849|1386010 hsa-miR-6749-3p 1 0 0
chrX:1385849|1386010 hsa-miR-18a-3p 0 1 0
chrX:1385849|1386010 hsa-miR-7155-5p 0 1 0
chrX:1385849|1386010 hsa-miR-6747-3p 1 0 0
chrX:1385849|1386010 hsa-miR-1233-3p 1 0 0
chrX:1385849|1386010 hsa-miR-125a-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6875-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6849-3p 0 1 0
chrX:1385849|1386010 hsa-miR-6787-3p 1 1 0
chrX:1385849|1386010 hsa-miR-1915-5p 1 0 0
chrX:1385849|1386010 hsa-miR-6845-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6796-5p 1 0 0
chrX:1385849|1386010 hsa-miR-4725-5p 1 1 0
chrX:1385849|1386010 hsa-miR-4697-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6882-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6788-3p 1 0 0
chrX:1385849|1386010 hsa-miR-221-3p 0 1 0
chrX:1385849|1386010 hsa-miR-6858-3p 1 0 0
chrX:1385849|1386010 hsa-miR-4436b-5p 1 1 0
chrX:1385849|1386010 hsa-miR-6852-5p 1 1 0
chrX:1385849|1386010 hsa-miR-6772-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6763-3p 1 0 0
chrX:1385849|1386010 hsa-miR-1909-5p 1 0 0
chrX:1385849|1386010 hsa-miR-6803-3p 1 0 0
chrX:1385849|1386010 hsa-miR-941 1 0 0
chrX:1385849|1386010 hsa-miR-4640-3p 1 0 0
chrX:1385849|1386010 hsa-miR-339-5p 1 0 0
chrX:1385849|1386010 hsa-miR-6889-3p 0 1 0
chrX:1385849|1386010 hsa-miR-2276-5p 0 1 0
chrX:1385849|1386010 hsa-miR-6752-3p 1 1 0
chrX:1385849|1386010 hsa-miR-7848-3p 0 1 0
chrX:1385849|1386010 hsa-miR-5088-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6738-3p 1 1 0
chrX:1385849|1386010 hsa-miR-6795-3p 1 1 0
chrX:1385849|1386010 hsa-miR-6880-3p 1 0 0
chrX:1385849|1386010 hsa-miR-3620-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6798-3p 1 1 0
chrX:1385849|1386010 hsa-miR-4727-5p 0 1 0
chrX:1385849|1386010 hsa-miR-6732-3p 0 1 0
chrX:1385849|1386010 hsa-miR-6808-3p 0 1 0
chrX:1385849|1386010 hsa-miR-6754-5p 0 1 0
chrX:1385849|1386010 hsa-miR-320a-5p 1 0 0
chrX:1385849|1386010 hsa-miR-4745-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6777-5p 1 0 0
chrX:1385849|1386010 hsa-miR-10396a-3p 1 0 0
chrX:1385849|1386010 hsa-miR-10396b-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6758-5p 0 1 0
chrX:1385849|1386010 hsa-miR-6856-5p 0 1 0
chrX:1385849|1386010 hsa-miR-6799-3p 1 0 0
chrX:1385849|1386010 hsa-miR-2682-3p 1 1 0
chrX:1385849|1386010 hsa-miR-6791-5p 1 0 0
chrX:1385849|1386010 hsa-miR-4722-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6756-3p 1 0 0
chrX:1385849|1386010 hsa-miR-10401-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6801-3p 1 0 0
chrX:1385849|1386010 hsa-miR-6810-3p 1 1 0
chrX:1385849|1386010 hsa-miR-6775-3p 1 1 0
chrX:1385849|1386010 hsa-miR-4756-5p 1 0 0
chrX:1385849|1386010 hsa-miR-4691-5p 1 0 0
chrX:1385849|1386010 hsa-miR-6827-3p 1 0 0
chrX:1385849|1386010 hsa-miR-4769-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:1385849|1386010
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MINAGGPQGTCTYCTLSESICMISCL
Nucleotide Sequence CTGATAAATGCTGGAGGACCCCAGGGCACCTGCACTTACTGTACCCTCTCTGAGAGCATTTGTATGATCTCATGTCTC
CircID chrX:1385849|1386010
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence LGHRGQGHSWEEAGGRNQGWQKCSRAP
Nucleotide Sequence CTGGGGCACAGAGGGCAGGGTCACAGCTGGGAAGAGGCGGGGGGTAGAAACCAAGGCTGGCAGAAGTGTAGCCGGGCTCCCTGA
CircID chrX:1385849|1386010
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MRSYKCSQRGYSKCRCPGVLQHLSGSPATLLPALVSTPRLFPAVTLPSVPQ
Nucleotide Sequence ATGAGATCATACAAATGCTCTCAGAGAGGGTACAGTAAGTGCAGGTGCCCTGGGGTCCTCCAGCATTTATCAGGGAGCCCGGCTACACTTCTGCCAGCCTTGGTTTCTACCCCCCGCCTCTTCCCAGCTGTGACCCTGCCCTCTGTGCCCCAG
CircID chrX:1385849|1386010
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MGSSSIYQGARLHFCQPWFLPPASSQL
Nucleotide Sequence CTGGGGTCCTCCAGCATTTATCAGGGAGCCCGGCTACACTTCTGCCAGCCTTGGTTTCTACCCCCCGCCTCTTCCCAGCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab