CircRNA Information

General Information
circRNA Basic Information
CircID chrX:149933785|149934089
Strand +
CircType exon
Host Gene ENSG00000197021.7;
Algorism CIRI2;
Sequence CTGAGTCAGCCGAATCCTAGCCCCTTCCCTTGGGCCTGCTGTGGTGCTCGACATCAGTGACAGACGGAAGCAGCAGACCATCAAGGTCAGTGCGATTTAGGCCACCTGAGAGACACGGGGGGAAGGTCAGGCCACTGCCCATGAGCTTGAAGGGCTGGCGTGTGATGCGCTTCTGTGCTTCCGCAGGCTACGGGAGGCCCGGGGCGCTTGCGAAGATGAAGTTTGGCTGCCTCTCCTTCCGGCAGCCTTATGCTGGCTTTGTCTTAAATGGAATCAAGACTGTGGAGACGCGCTGGCGTCCTCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:149933785|149934089 hsa-miR-29a-5p 0 0 1
chrX:149933785|149934089 hsa-miR-29a-3p 0 0 1
chrX:149933785|149934089 hsa-miR-208a-5p 0 0 1
chrX:149933785|149934089 hsa-miR-208a-3p 0 0 1
chrX:149933785|149934089 hsa-miR-34a-5p 0 0 1
chrX:149933785|149934089 hsa-miR-34a-3p 0 0 1
chrX:149933785|149934089 hsa-miR-187-5p 0 0 1
chrX:149933785|149934089 hsa-miR-187-3p 0 0 1
chrX:149933785|149934089 hsa-miR-214-5p 0 0 1
chrX:149933785|149934089 hsa-miR-214-3p 0 0 1
chrX:149933785|149934089 hsa-miR-29c-5p 0 0 1
chrX:149933785|149934089 hsa-miR-29c-3p 0 0 1
chrX:149933785|149934089 hsa-miR-345-5p 0 0 1
chrX:149933785|149934089 hsa-miR-345-3p 0 0 1
chrX:149933785|149934089 hsa-miR-449a 0 0 1
chrX:149933785|149934089 hsa-miR-498-5p 0 0 1
chrX:149933785|149934089 hsa-miR-498-3p 0 0 1
chrX:149933785|149934089 hsa-miR-593-5p 0 0 1
chrX:149933785|149934089 hsa-miR-593-3p 0 0 1
chrX:149933785|149934089 hsa-miR-596 0 0 1
chrX:149933785|149934089 hsa-miR-641 0 0 1
chrX:149933785|149934089 hsa-miR-449b-5p 0 0 1
chrX:149933785|149934089 hsa-miR-449b-3p 0 0 1
chrX:149933785|149934089 hsa-miR-668-5p 0 0 1
chrX:149933785|149934089 hsa-miR-668-3p 0 0 1
chrX:149933785|149934089 hsa-miR-208b-5p 0 0 1
chrX:149933785|149934089 hsa-miR-208b-3p 0 0 1
chrX:149933785|149934089 hsa-miR-1266-5p 0 0 1
chrX:149933785|149934089 hsa-miR-1266-3p 0 0 1
chrX:149933785|149934089 hsa-miR-1827 0 0 1
chrX:149933785|149934089 hsa-miR-125a-3p 0 0 1
chrX:149933785|149934089 hsa-miR-140-3p 0 0 1
chrX:149933785|149934089 hsa-miR-338-3p 0 0 1
chrX:149933785|149934089 hsa-miR-34c-5p 0 0 1
chrX:149933785|149934089 hsa-miR-516a-3p 0 0 1
chrX:149933785|149934089 hsa-miR-1308 0 0 1
chrX:149933785|149934089 hsa-miR-129-3p 0 0 1
chrX:149933785|149934089 hsa-miR-499-5p 0 0 1
chrX:149933785|149934089 hsa-miR-29b 0 0 1
chrX:149933785|149934089 hsa-miR-612 1 0 0
chrX:149933785|149934089 hsa-miR-663a 1 0 0
chrX:149933785|149934089 hsa-miR-3137 0 1 0
chrX:149933785|149934089 hsa-miR-3196 1 0 0
chrX:149933785|149934089 hsa-miR-4252 1 0 0
chrX:149933785|149934089 hsa-miR-4420 0 1 0
chrX:149933785|149934089 hsa-miR-4483 1 0 0
chrX:149933785|149934089 hsa-miR-4489 0 1 0
chrX:149933785|149934089 hsa-miR-4533 0 1 0
chrX:149933785|149934089 hsa-miR-3972 1 1 0
chrX:149933785|149934089 hsa-miR-4739 1 0 0
chrX:149933785|149934089 hsa-miR-5693 0 1 0
chrX:149933785|149934089 hsa-miR-6069 0 1 0
chrX:149933785|149934089 hsa-miR-6085 1 1 0
chrX:149933785|149934089 hsa-miR-6125 0 1 0
chrX:149933785|149934089 hsa-miR-7706 0 1 0
chrX:149933785|149934089 hsa-miR-9899 1 0 0
chrX:149933785|149934089 hsa-miR-3194-3p 1 0 0
chrX:149933785|149934089 hsa-miR-218-1-3p 1 0 0
chrX:149933785|149934089 hsa-miR-3663-3p 1 1 0
chrX:149933785|149934089 hsa-miR-3677-5p 0 1 0
chrX:149933785|149934089 hsa-miR-6762-3p 0 1 0
chrX:149933785|149934089 hsa-miR-6829-5p 0 1 0
chrX:149933785|149934089 hsa-miR-6858-3p 1 0 0
chrX:149933785|149934089 hsa-miR-6835-5p 1 0 0
chrX:149933785|149934089 hsa-miR-3944-3p 1 0 0
chrX:149933785|149934089 hsa-miR-3679-3p 0 1 0
chrX:149933785|149934089 hsa-miR-4690-5p 1 1 0
chrX:149933785|149934089 hsa-miR-3677-3p 1 0 0
chrX:149933785|149934089 hsa-miR-6847-5p 0 1 0
chrX:149933785|149934089 hsa-miR-1236-3p 1 0 0
chrX:149933785|149934089 hsa-miR-3120-5p 0 1 0
chrX:149933785|149934089 hsa-miR-7112-3p 1 1 0
chrX:149933785|149934089 hsa-miR-6814-5p 0 1 0
chrX:149933785|149934089 hsa-miR-6895-3p 0 1 0
chrX:149933785|149934089 hsa-miR-1292-3p 1 1 0
chrX:149933785|149934089 hsa-miR-6734-3p 1 1 0
chrX:149933785|149934089 hsa-miR-6847-3p 0 1 0
chrX:149933785|149934089 hsa-miR-4738-5p 0 1 0
chrX:149933785|149934089 hsa-miR-4763-3p 1 0 0
chrX:149933785|149934089 hsa-miR-6865-5p 0 1 0
chrX:149933785|149934089 hsa-miR-6743-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6756-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6813-5p 1 1 0
chrX:149933785|149934089 hsa-miR-6779-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6797-5p 1 1 0
chrX:149933785|149934089 hsa-miR-3620-5p 1 0 0
chrX:149933785|149934089 hsa-miR-5196-5p 1 1 0
chrX:149933785|149934089 hsa-miR-10396a-5p 1 0 0
chrX:149933785|149934089 hsa-miR-4649-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6729-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6846-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6848-5p 1 0 0
chrX:149933785|149934089 hsa-miR-10396a-3p 1 1 0
chrX:149933785|149934089 hsa-miR-10396b-3p 1 1 0
chrX:149933785|149934089 hsa-miR-4747-5p 0 1 0
chrX:149933785|149934089 hsa-miR-6791-5p 1 0 0
chrX:149933785|149934089 hsa-miR-6753-3p 1 0 0
chrX:149933785|149934089 hsa-miR-7107-3p 0 1 0
chrX:149933785|149934089 hsa-miR-1234-3p 1 1 0
chrX:149933785|149934089 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:149933785|149934089
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MACDALLCFRRLREARGACEDEVWLPLLPAALCWLCLKWNQDCGDALASS
Nucleotide Sequence CTGGCGTGTGATGCGCTTCTGTGCTTCCGCAGGCTACGGGAGGCCCGGGGCGCTTGCGAAGATGAAGTTTGGCTGCCTCTCCTTCCGGCAGCCTTATGCTGGCTTTGTCTTAAATGGAATCAAGACTGTGGAGACGCGCTGGCGTCCTCT
CircID chrX:149933785|149934089
ORF Type ORF2
Protein Length 92
Nucleotide Length 276
Protein Sequence MGLLWCSTSVTDGSSRPSRSVRFRPPERHGGKVRPLPMSLKGWRVMRFCASAGYGRPGALAKMKFGCLSFRQPYAGFVLNGIKTVETRWRPL
Nucleotide Sequence TTGGGCCTGCTGTGGTGCTCGACATCAGTGACAGACGGAAGCAGCAGACCATCAAGGTCAGTGCGATTTAGGCCACCTGAGAGACACGGGGGGAAGGTCAGGCCACTGCCCATGAGCTTGAAGGGCTGGCGTGTGATGCGCTTCTGTGCTTCCGCAGGCTACGGGAGGCCCGGGGCGCTTGCGAAGATGAAGTTTGGCTGCCTCTCCTTCCGGCAGCCTTATGCTGGCTTTGTCTTAAATGGAATCAAGACTGTGGAGACGCGCTGGCGTCCTCTG
CircID chrX:149933785|149934089
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MPEGEAAKLHLRKRPGPPVACGSTEAHHTPALQAHGQWPDLPPVSLRWPKSH
Nucleotide Sequence CTGCCGGAAGGAGAGGCAGCCAAACTTCATCTTCGCAAGCGCCCCGGGCCTCCCGTAGCCTGCGGAAGCACAGAAGCGCATCACACGCCAGCCCTTCAAGCTCATGGGCAGTGGCCTGACCTTCCCCCCGTGTCTCTCAGGTGGCCTAAATCGCACTGA
CircID chrX:149933785|149934089
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MGSGLTFPPCLSGGLNRTDLDGLLLPSVTDVEHHSRPKGRG
Nucleotide Sequence ATGGGCAGTGGCCTGACCTTCCCCCCGTGTCTCTCAGGTGGCCTAAATCGCACTGACCTTGATGGTCTGCTGCTTCCGTCTGTCACTGATGTCGAGCACCACAGCAGGCCCAAGGGAAGGGGCTAG
CircID chrX:149933785|149934089
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MTLMVCCFRLSLMSSTTAGPREGARIRLTQ
Nucleotide Sequence CTGACCTTGATGGTCTGCTGCTTCCGTCTGTCACTGATGTCGAGCACCACAGCAGGCCCAAGGGAAGGGGCTAGGATTCGGCTGACTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab