CircRNA Information

General Information
circRNA Basic Information
CircID chrX:1502376|1502560
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence TTCGAACACAGAGTGAGTGTTGGTGACACTCAGCCAGGGACAGGACCCCGCTGCGAGCCAGGTTCCTCTTTCTACTGACTCTCTGGGGACCCTGTTTGCCTCCCGGCAACACGCTTTGCCGAAGAGCCCCTGTGCTGGCTGCCACGTGAGCCGCCCCTGTCCCTACTCTCAGCAGCCTTCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:1502376|1502560 hsa-miR-149-5p 0 0 1
chrX:1502376|1502560 hsa-miR-149-3p 0 0 1
chrX:1502376|1502560 hsa-miR-583 0 0 1
chrX:1502376|1502560 hsa-miR-597-5p 0 0 1
chrX:1502376|1502560 hsa-miR-597-3p 0 0 1
chrX:1502376|1502560 hsa-miR-650 0 0 1
chrX:1502376|1502560 hsa-miR-936 1 1 1
chrX:1502376|1502560 hsa-miR-491-5p 0 1 1
chrX:1502376|1502560 hsa-miR-615-5p 1 1 1
chrX:1502376|1502560 hsa-miR-885-3p 0 0 1
chrX:1502376|1502560 hsa-miR-574-5p 0 0 1
chrX:1502376|1502560 hsa-miR-490-3p 0 0 1
chrX:1502376|1502560 hsa-miR-199b-3p 0 0 1
chrX:1502376|1502560 hsa-miR-199a-3p 0 0 1
chrX:1502376|1502560 hsa-miR-220c 0 0 1
chrX:1502376|1502560 hsa-miR-608 1 0 0
chrX:1502376|1502560 hsa-miR-762 1 0 0
chrX:1502376|1502560 hsa-miR-1182 1 0 0
chrX:1502376|1502560 hsa-miR-2110 1 1 0
chrX:1502376|1502560 hsa-miR-3125 0 1 0
chrX:1502376|1502560 hsa-miR-3132 1 0 0
chrX:1502376|1502560 hsa-miR-3153 1 0 0
chrX:1502376|1502560 hsa-miR-3196 1 0 0
chrX:1502376|1502560 hsa-miR-4298 1 0 0
chrX:1502376|1502560 hsa-miR-4327 1 0 0
chrX:1502376|1502560 hsa-miR-4270 1 1 0
chrX:1502376|1502560 hsa-miR-3665 1 0 0
chrX:1502376|1502560 hsa-miR-4463 1 0 0
chrX:1502376|1502560 hsa-miR-4467 1 0 0
chrX:1502376|1502560 hsa-miR-4470 0 1 0
chrX:1502376|1502560 hsa-miR-4481 1 0 0
chrX:1502376|1502560 hsa-miR-4488 1 0 0
chrX:1502376|1502560 hsa-miR-4516 1 0 0
chrX:1502376|1502560 hsa-miR-4651 1 0 0
chrX:1502376|1502560 hsa-miR-4688 1 0 0
chrX:1502376|1502560 hsa-miR-4706 1 0 0
chrX:1502376|1502560 hsa-miR-5090 1 0 0
chrX:1502376|1502560 hsa-miR-6085 1 0 0
chrX:1502376|1502560 hsa-miR-6125 1 0 0
chrX:1502376|1502560 hsa-miR-8089 1 0 0
chrX:1502376|1502560 hsa-miR-211-3p 1 0 0
chrX:1502376|1502560 hsa-miR-7106-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6825-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6894-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4687-3p 1 1 0
chrX:1502376|1502560 hsa-miR-6510-5p 1 0 0
chrX:1502376|1502560 hsa-miR-3622a-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1227-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6880-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6746-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6762-3p 1 0 0
chrX:1502376|1502560 hsa-miR-3928-3p 0 1 0
chrX:1502376|1502560 hsa-miR-6727-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6721-5p 1 0 0
chrX:1502376|1502560 hsa-miR-197-5p 1 0 0
chrX:1502376|1502560 hsa-miR-8069 1 0 0
chrX:1502376|1502560 hsa-miR-432-5p 1 0 0
chrX:1502376|1502560 hsa-miR-7845-5p 1 1 0
chrX:1502376|1502560 hsa-miR-6871-5p 1 0 0
chrX:1502376|1502560 hsa-miR-3180-3p 1 0 0
chrX:1502376|1502560 hsa-miR-6829-5p 1 1 0
chrX:1502376|1502560 hsa-miR-6805-5p 1 0 0
chrX:1502376|1502560 hsa-miR-23a-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6798-5p 1 0 0
chrX:1502376|1502560 hsa-miR-3126-5p 1 0 0
chrX:1502376|1502560 hsa-miR-486-3p 1 0 0
chrX:1502376|1502560 hsa-miR-6782-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6810-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1226-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1229-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6784-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4640-5p 1 0 0
chrX:1502376|1502560 hsa-miR-296-3p 1 0 0
chrX:1502376|1502560 hsa-miR-4650-3p 0 1 0
chrX:1502376|1502560 hsa-miR-6771-5p 1 0 0
chrX:1502376|1502560 hsa-miR-92b-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6824-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6789-5p 1 0 0
chrX:1502376|1502560 hsa-miR-3162-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4707-5p 1 0 0
chrX:1502376|1502560 hsa-miR-2355-5p 0 1 0
chrX:1502376|1502560 hsa-miR-5004-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6761-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6748-3p 0 1 0
chrX:1502376|1502560 hsa-miR-10400-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1207-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1233-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4763-3p 1 1 0
chrX:1502376|1502560 hsa-miR-6778-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6816-5p 1 1 0
chrX:1502376|1502560 hsa-miR-6743-5p 1 1 0
chrX:1502376|1502560 hsa-miR-6803-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6813-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6722-3p 1 0 0
chrX:1502376|1502560 hsa-miR-6763-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6779-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6879-5p 1 0 0
chrX:1502376|1502560 hsa-miR-7111-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1915-3p 1 0 0
chrX:1502376|1502560 hsa-miR-4728-5p 1 0 0
chrX:1502376|1502560 hsa-miR-5196-5p 1 1 0
chrX:1502376|1502560 hsa-miR-6780b-5p 1 1 0
chrX:1502376|1502560 hsa-miR-1237-5p 1 0 0
chrX:1502376|1502560 hsa-miR-1909-3p 1 0 0
chrX:1502376|1502560 hsa-miR-328-5p 1 1 0
chrX:1502376|1502560 hsa-miR-4632-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4725-3p 1 1 0
chrX:1502376|1502560 hsa-miR-4745-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4749-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6729-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6777-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6795-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6858-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6883-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6887-5p 1 0 0
chrX:1502376|1502560 hsa-miR-4758-5p 1 0 0
chrX:1502376|1502560 hsa-miR-10398-3p 1 0 0
chrX:1502376|1502560 hsa-miR-4747-5p 0 1 0
chrX:1502376|1502560 hsa-miR-6785-5p 1 0 0
chrX:1502376|1502560 hsa-miR-6859-5p 0 1 0
chrX:1502376|1502560 hsa-miR-135a-2-3p 1 0 0
chrX:1502376|1502560 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:1502376|1502560
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MVTLSQGQDPAASQVPLSTDSLGTLFASRQHALPKSPCAGCHVSRPCPYSQQPSP
Nucleotide Sequence TTGGTGACACTCAGCCAGGGACAGGACCCCGCTGCGAGCCAGGTTCCTCTTTCTACTGACTCTCTGGGGACCCTGTTTGCCTCCCGGCAACACGCTTTGCCGAAGAGCCCCTGTGCTGGCTGCCACGTGAGCCGCCCCTGTCCCTACTCTCAGCAGCCTTCCCCA
CircID chrX:1502376|1502560
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MRARFLFLLTLWGPCLPPGNTLCRRAPVLAAT
Nucleotide Sequence CTGCGAGCCAGGTTCCTCTTTCTACTGACTCTCTGGGGACCCTGTTTGCCTCCCGGCAACACGCTTTGCCGAAGAGCCCCTGTGCTGGCTGCCACGTGA
CircID chrX:1502376|1502560
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MLRVGTGAAHVAASTGALRQSVLPGGKQGPQRVSRKRNLARSGVLSLAECHQHSLCVR
Nucleotide Sequence CTGCTGAGAGTAGGGACAGGGGCGGCTCACGTGGCAGCCAGCACAGGGGCTCTTCGGCAAAGCGTGTTGCCGGGAGGCAAACAGGGTCCCCAGAGAGTCAGTAGAAAGAGGAACCTGGCTCGCAGCGGGGTCCTGTCCCTGGCTGAGTGTCACCAACACTCACTCTGTGTTCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab