CircRNA Information

General Information
circRNA Basic Information
CircID chrX:150766848|150767103
Strand +
CircType exon
Host Gene ENSG00000102181.18;
Algorism CIRI2;
Sequence CTGGACAGCGTGACCTCAGGGGTTGTCCACTTTACCTTTATGGTGAGGCCTGTCGGATGGCTAAGTCCTTGAAACCCTAGAGCTGTGACGTAGAATATGTGCTGTCTGTGAGACCGTGTTCCCAGGAGCACTGACTGCAGTTGAGAGAGACCCATTTTGCTCTCCCTTACCGCCCCCCGCCCCGGGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGACATGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:150766848|150767103 hsa-miR-17-5p 0 0 1
chrX:150766848|150767103 hsa-miR-17-3p 0 0 1
chrX:150766848|150767103 hsa-miR-20a-5p 0 0 1
chrX:150766848|150767103 hsa-miR-20a-3p 0 0 1
chrX:150766848|150767103 hsa-miR-22-5p 0 0 1
chrX:150766848|150767103 hsa-miR-22-3p 0 0 1
chrX:150766848|150767103 hsa-miR-93-5p 0 0 1
chrX:150766848|150767103 hsa-miR-93-3p 0 0 1
chrX:150766848|150767103 hsa-miR-106a-5p 0 0 1
chrX:150766848|150767103 hsa-miR-106a-3p 0 0 1
chrX:150766848|150767103 hsa-miR-198 0 0 1
chrX:150766848|150767103 hsa-miR-148a-5p 0 0 1
chrX:150766848|150767103 hsa-miR-148a-3p 0 0 1
chrX:150766848|150767103 hsa-miR-152-5p 0 0 1
chrX:150766848|150767103 hsa-miR-152-3p 0 0 1
chrX:150766848|150767103 hsa-miR-106b-5p 0 0 1
chrX:150766848|150767103 hsa-miR-106b-3p 0 0 1
chrX:150766848|150767103 hsa-miR-148b-5p 0 0 1
chrX:150766848|150767103 hsa-miR-148b-3p 0 0 1
chrX:150766848|150767103 hsa-miR-20b-5p 0 0 1
chrX:150766848|150767103 hsa-miR-20b-3p 0 0 1
chrX:150766848|150767103 hsa-miR-484 0 0 1
chrX:150766848|150767103 hsa-miR-498-5p 0 0 1
chrX:150766848|150767103 hsa-miR-498-3p 0 0 1
chrX:150766848|150767103 hsa-miR-519d-5p 0 0 1
chrX:150766848|150767103 hsa-miR-519d-3p 0 0 1
chrX:150766848|150767103 hsa-miR-558 0 0 1
chrX:150766848|150767103 hsa-miR-598-5p 0 0 1
chrX:150766848|150767103 hsa-miR-598-3p 0 0 1
chrX:150766848|150767103 hsa-miR-645 0 0 1
chrX:150766848|150767103 hsa-miR-298 0 0 1
chrX:150766848|150767103 hsa-miR-541-5p 0 0 1
chrX:150766848|150767103 hsa-miR-541-3p 0 0 1
chrX:150766848|150767103 hsa-miR-708-5p 0 0 1
chrX:150766848|150767103 hsa-miR-708-3p 0 0 1
chrX:150766848|150767103 hsa-miR-548m 0 0 1
chrX:150766848|150767103 hsa-miR-548p 0 0 1
chrX:150766848|150767103 hsa-miR-1292-5p 0 0 1
chrX:150766848|150767103 hsa-miR-1292-3p 0 0 1
chrX:150766848|150767103 hsa-miR-1324 0 1 1
chrX:150766848|150767103 hsa-miR-296-3p 0 0 1
chrX:150766848|150767103 hsa-miR-193a-5p 0 0 1
chrX:150766848|150767103 hsa-miR-654-5p 0 0 1
chrX:150766848|150767103 hsa-miR-28-5p 0 0 1
chrX:150766848|150767103 hsa-miR-125a-5p 0 0 1
chrX:150766848|150767103 hsa-miR-509-3-5p 0 0 1
chrX:150766848|150767103 hsa-miR-509-5p 0 1 1
chrX:150766848|150767103 hsa-miR-342-3p 0 0 1
chrX:150766848|150767103 hsa-miR-125b 0 0 1
chrX:150766848|150767103 hsa-miR-663 0 0 1
chrX:150766848|150767103 hsa-miR-608 1 1 0
chrX:150766848|150767103 hsa-miR-663a 1 1 0
chrX:150766848|150767103 hsa-miR-762 1 0 0
chrX:150766848|150767103 hsa-miR-760 1 0 0
chrX:150766848|150767103 hsa-miR-1268a 1 0 0
chrX:150766848|150767103 hsa-miR-3131 1 0 0
chrX:150766848|150767103 hsa-miR-544b 0 1 0
chrX:150766848|150767103 hsa-miR-3138 0 1 0
chrX:150766848|150767103 hsa-miR-3139 0 1 0
chrX:150766848|150767103 hsa-miR-3141 1 0 0
chrX:150766848|150767103 hsa-miR-3155a 0 1 0
chrX:150766848|150767103 hsa-miR-3188 1 1 0
chrX:150766848|150767103 hsa-miR-3196 1 1 0
chrX:150766848|150767103 hsa-miR-1268b 1 0 0
chrX:150766848|150767103 hsa-miR-378g 0 1 0
chrX:150766848|150767103 hsa-miR-4467 1 0 0
chrX:150766848|150767103 hsa-miR-4488 1 0 0
chrX:150766848|150767103 hsa-miR-4512 1 0 0
chrX:150766848|150767103 hsa-miR-1587 1 0 0
chrX:150766848|150767103 hsa-miR-4651 1 0 0
chrX:150766848|150767103 hsa-miR-4706 1 0 0
chrX:150766848|150767103 hsa-miR-5698 1 0 0
chrX:150766848|150767103 hsa-miR-5787 1 0 0
chrX:150766848|150767103 hsa-miR-8085 0 1 0
chrX:150766848|150767103 hsa-miR-8089 1 0 0
chrX:150766848|150767103 hsa-miR-6747-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6765-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6825-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6822-3p 0 1 0
chrX:150766848|150767103 hsa-miR-4755-3p 1 1 0
chrX:150766848|150767103 hsa-miR-6727-5p 1 1 0
chrX:150766848|150767103 hsa-miR-3180-3p 1 0 0
chrX:150766848|150767103 hsa-miR-4697-3p 0 1 0
chrX:150766848|150767103 hsa-miR-6805-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6760-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6782-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6850-5p 1 1 0
chrX:150766848|150767103 hsa-miR-1343-3p 0 1 0
chrX:150766848|150767103 hsa-miR-6786-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6852-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6772-3p 0 1 0
chrX:150766848|150767103 hsa-miR-6784-5p 1 1 0
chrX:150766848|150767103 hsa-miR-4640-5p 1 0 0
chrX:150766848|150767103 hsa-miR-1908-5p 1 1 0
chrX:150766848|150767103 hsa-miR-1228-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6892-5p 0 1 0
chrX:150766848|150767103 hsa-miR-5010-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4746-3p 1 0 0
chrX:150766848|150767103 hsa-miR-4750-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4650-5p 0 1 0
chrX:150766848|150767103 hsa-miR-10400-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4763-3p 1 0 0
chrX:150766848|150767103 hsa-miR-6769b-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6787-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6816-5p 1 1 0
chrX:150766848|150767103 hsa-miR-6775-5p 1 0 0
chrX:150766848|150767103 hsa-miR-1343-5p 1 0 0
chrX:150766848|150767103 hsa-miR-3180 0 1 0
chrX:150766848|150767103 hsa-miR-6752-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6756-5p 1 1 0
chrX:150766848|150767103 hsa-miR-6803-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6813-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6819-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6842-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6851-5p 1 0 0
chrX:150766848|150767103 hsa-miR-7110-5p 1 0 0
chrX:150766848|150767103 hsa-miR-3620-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4728-5p 1 0 0
chrX:150766848|150767103 hsa-miR-10396b-5p 1 0 0
chrX:150766848|150767103 hsa-miR-1237-5p 1 1 0
chrX:150766848|150767103 hsa-miR-328-5p 1 1 0
chrX:150766848|150767103 hsa-miR-4649-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6729-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6795-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6846-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6848-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6887-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6885-5p 0 1 0
chrX:150766848|150767103 hsa-miR-939-5p 1 0 0
chrX:150766848|150767103 hsa-miR-3940-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6731-5p 1 1 0
chrX:150766848|150767103 hsa-miR-4665-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4646-5p 0 1 0
chrX:150766848|150767103 hsa-miR-6790-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6791-5p 1 0 0
chrX:150766848|150767103 hsa-miR-4756-5p 1 0 0
chrX:150766848|150767103 hsa-miR-6817-5p 0 1 0
chrX:150766848|150767103 hsa-miR-1301-5p 0 1 0
chrX:150766848|150767103 hsa-miR-370-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:150766848|150767103
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MTAVERDPFCSPLPPPAPGAFCTKPRAWHSSPPVAAPSDWTC
Nucleotide Sequence CTGACTGCAGTTGAGAGAGACCCATTTTGCTCTCCCTTACCGCCCCCCGCCCCGGGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGACATGC
CircID chrX:150766848|150767103
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MQLRETHFALPYRPPPRVLSAQSLEPGTQAHRWQLLVTGH
Nucleotide Sequence CTGCAGTTGAGAGAGACCCATTTTGCTCTCCCTTACCGCCCCCCGCCCCGGGTGCTTTCTGCACAAAGCCTAGAGCCTGGCACTCAAGCCCACCGGTGGCAGCTCCTAGTGACTGGACAT
CircID chrX:150766848|150767103
ORF Type ORF3
Protein Length 66
Nucleotide Length 198
Protein Sequence MCRKHPGRGAVRESKMGLSQLQSVLLGTRSHRQHIFYVTALGFQGLSHPTGLTIKVKWTTPEVTLS
Nucleotide Sequence TTGTGCAGAAAGCACCCGGGGCGGGGGGCGGTAAGGGAGAGCAAAATGGGTCTCTCTCAACTGCAGTCAGTGCTCCTGGGAACACGGTCTCACAGACAGCACATATTCTACGTCACAGCTCTAGGGTTTCAAGGACTTAGCCATCCGACAGGCCTCACCATAAAGGTAAAGTGGACAACCCCTGAGGTCACGCTGTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab