CircRNA Information

General Information
circRNA Basic Information
CircID chrX:153508713|153508827
Strand +
CircType exon
Host Gene ENSG00000182492.14;
Algorism CIRI2;
Sequence TGTCCCCATTCTTATGGACCGCCTCCTGGCTGCTGACCCAGGGACTGTTCTCCTAGGACTGGAGCCTTGGACACTTGGGTTTGGGAGTGAACGAGAAAAAAGCTTCATGGGGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:153508713|153508827 hsa-miR-212-5p 0 0 1
chrX:153508713|153508827 hsa-miR-212-3p 0 0 1
chrX:153508713|153508827 hsa-miR-214-5p 0 0 1
chrX:153508713|153508827 hsa-miR-214-3p 0 0 1
chrX:153508713|153508827 hsa-miR-132-5p 0 0 1
chrX:153508713|153508827 hsa-miR-132-3p 0 0 1
chrX:153508713|153508827 hsa-miR-150-5p 0 0 1
chrX:153508713|153508827 hsa-miR-150-3p 0 0 1
chrX:153508713|153508827 hsa-miR-665 0 1 1
chrX:153508713|153508827 hsa-miR-922 0 0 1
chrX:153508713|153508827 hsa-miR-127-5p 0 0 1
chrX:153508713|153508827 hsa-miR-483-3p 0 0 1
chrX:153508713|153508827 hsa-miR-661 1 0 0
chrX:153508713|153508827 hsa-miR-3137 1 0 0
chrX:153508713|153508827 hsa-miR-4313 1 0 0
chrX:153508713|153508827 hsa-miR-4277 0 1 0
chrX:153508713|153508827 hsa-miR-4292 0 1 0
chrX:153508713|153508827 hsa-miR-3937 0 1 0
chrX:153508713|153508827 hsa-miR-4449 1 0 0
chrX:153508713|153508827 hsa-miR-6070 1 0 0
chrX:153508713|153508827 hsa-miR-6765-5p 1 0 0
chrX:153508713|153508827 hsa-miR-4695-5p 0 1 0
chrX:153508713|153508827 hsa-miR-6805-5p 1 0 0
chrX:153508713|153508827 hsa-miR-4640-5p 1 0 0
chrX:153508713|153508827 hsa-miR-6824-5p 1 0 0
chrX:153508713|153508827 hsa-miR-3925-3p 0 1 0
chrX:153508713|153508827 hsa-miR-5571-3p 0 1 0
chrX:153508713|153508827 hsa-miR-6851-5p 1 0 0
chrX:153508713|153508827 hsa-miR-4685-5p 1 0 0
chrX:153508713|153508827 hsa-miR-6750-5p 1 0 0
chrX:153508713|153508827 hsa-miR-6791-5p 1 1 0
chrX:153508713|153508827 hsa-miR-6500-5p 1 0 0
chrX:153508713|153508827 hsa-miR-3619-5p 1 0 0
chrX:153508713|153508827 hsa-miR-208b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:153508713|153508827
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MDRLLAADPGTVLLGLEPWTLGFGSEREKSFMGC
Nucleotide Sequence ATGGACCGCCTCCTGGCTGCTGACCCAGGGACTGTTCTCCTAGGACTGGAGCCTTGGACACTTGGGTTTGGGAGTGAACGAGAAAAAAGCTTCATGGGGTGC

CircID chrX:153508713|153508827
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MKLFSRSLPNPSVQGSSPRRTVPGSAARRRSIRMGT
Nucleotide Sequence ATGAAGCTTTTTTCTCGTTCACTCCCAAACCCAAGTGTCCAAGGCTCCAGTCCTAGGAGAACAGTCCCTGGGTCAGCAGCCAGGAGGCGGTCCATAAGAATGGGGACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites