CircRNA Information

General Information
circRNA Basic Information
CircID chrX:153509140|153509345
Strand +
CircType exon
Host Gene ENSG00000182492.14;
Algorism CIRI2;
Sequence CTCCTCCGGGACAGTACAGGTTTGGGGGCAAGGCCTGAGCAGGGCAGGCTGGGGAGACTGCTGTCCCTGGGGTTTTGTGGGCAGGGGCTGGGTGCAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAGGCAGAAGGCCAGAGGGTGTGGAGTGAAAGGGACAGGCGAAGCCAGGTTCGGAGAGATGGAGGGAACAGGCCACCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:153509140|153509345 hsa-miR-204-5p 0 0 1
chrX:153509140|153509345 hsa-miR-204-3p 0 0 1
chrX:153509140|153509345 hsa-miR-211-5p 0 0 1
chrX:153509140|153509345 hsa-miR-211-3p 0 0 1
chrX:153509140|153509345 hsa-miR-558 0 0 1
chrX:153509140|153509345 hsa-miR-596 1 0 1
chrX:153509140|153509345 hsa-miR-649 0 0 1
chrX:153509140|153509345 hsa-miR-765 0 0 1
chrX:153509140|153509345 hsa-miR-874-5p 0 0 1
chrX:153509140|153509345 hsa-miR-874-3p 0 0 1
chrX:153509140|153509345 hsa-miR-1234-3p 0 0 1
chrX:153509140|153509345 hsa-miR-1237-5p 0 0 1
chrX:153509140|153509345 hsa-miR-1237-3p 0 0 1
chrX:153509140|153509345 hsa-miR-1288-5p 0 0 1
chrX:153509140|153509345 hsa-miR-1288-3p 0 0 1
chrX:153509140|153509345 hsa-miR-1234 0 0 1
chrX:153509140|153509345 hsa-miR-486-5p 1 0 1
chrX:153509140|153509345 hsa-miR-146b-3p 0 0 1
chrX:153509140|153509345 hsa-miR-490-3p 0 0 1
chrX:153509140|153509345 hsa-miR-767-3p 0 0 1
chrX:153509140|153509345 hsa-miR-483-3p 0 0 1
chrX:153509140|153509345 hsa-miR-642 0 0 1
chrX:153509140|153509345 hsa-miR-346 1 0 0
chrX:153509140|153509345 hsa-miR-661 1 0 0
chrX:153509140|153509345 hsa-miR-762 1 0 0
chrX:153509140|153509345 hsa-miR-663b 1 0 0
chrX:153509140|153509345 hsa-miR-1204 1 0 0
chrX:153509140|153509345 hsa-miR-1913 1 0 0
chrX:153509140|153509345 hsa-miR-4456 1 0 0
chrX:153509140|153509345 hsa-miR-4483 1 0 0
chrX:153509140|153509345 hsa-miR-4642 1 0 0
chrX:153509140|153509345 hsa-miR-7703 1 0 0
chrX:153509140|153509345 hsa-miR-26b-3p 1 0 0
chrX:153509140|153509345 hsa-miR-214-5p 1 0 0
chrX:153509140|153509345 hsa-miR-323a-5p 1 0 0
chrX:153509140|153509345 hsa-miR-149-5p 1 0 0
chrX:153509140|153509345 hsa-miR-766-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1225-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6849-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1915-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6765-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6774-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6735-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6716-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6858-3p 1 0 0
chrX:153509140|153509345 hsa-miR-615-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4436b-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6815-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4763-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6763-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1247-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6894-3p 1 0 0
chrX:153509140|153509345 hsa-miR-5010-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6514-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6818-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1266-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4446-5p 1 0 0
chrX:153509140|153509345 hsa-miR-339-5p 1 0 0
chrX:153509140|153509345 hsa-miR-4646-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1236-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4742-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6811-3p 1 0 0
chrX:153509140|153509345 hsa-miR-2114-5p 1 0 0
chrX:153509140|153509345 hsa-miR-4732-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6828-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4664-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6887-3p 1 0 0
chrX:153509140|153509345 hsa-miR-1910-5p 1 0 0
chrX:153509140|153509345 hsa-miR-7151-5p 1 0 0
chrX:153509140|153509345 hsa-miR-1914-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6773-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6748-3p 1 0 0
chrX:153509140|153509345 hsa-miR-7152-5p 1 0 0
chrX:153509140|153509345 hsa-miR-4433b-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6800-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4685-3p 1 0 0
chrX:153509140|153509345 hsa-miR-4755-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6754-3p 1 0 0
chrX:153509140|153509345 hsa-miR-3620-5p 1 0 0
chrX:153509140|153509345 hsa-miR-6799-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6877-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6753-3p 1 0 0
chrX:153509140|153509345 hsa-miR-7107-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6805-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6810-3p 1 0 0
chrX:153509140|153509345 hsa-miR-10392-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6529-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6819-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6781-3p 1 0 0
chrX:153509140|153509345 hsa-miR-5006-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6824-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6737-3p 1 0 0
chrX:153509140|153509345 hsa-miR-6503-5p 1 0 0
chrX:153509140|153509345 hsa-miR-193a-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:153509140|153509345
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MGARPEQGRLGRLLSLGFCGQGLGAGRTDRKQSQLKAEGQRVWSERDRRSQVRRDGGNRPP
Nucleotide Sequence TTGGGGGCAAGGCCTGAGCAGGGCAGGCTGGGGAGACTGCTGTCCCTGGGGTTTTGTGGGCAGGGGCTGGGTGCAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAGGCAGAAGGCCAGAGGGTGTGGAGTGAAAGGGACAGGCGAAGCCAGGTTCGGAGAGATGGAGGGAACAGGCCACCA
CircID chrX:153509140|153509345
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MSRAGWGDCCPWGFVGRGWVQAGQTESSPSSRQKARGCGVKGTGEARFGEMEGTGHQ
Nucleotide Sequence CTGAGCAGGGCAGGCTGGGGAGACTGCTGTCCCTGGGGTTTTGTGGGCAGGGGCTGGGTGCAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAGGCAGAAGGCCAGAGGGTGTGGAGTGAAAGGGACAGGCGAAGCCAGGTTCGGAGAGATGGAGGGAACAGGCCACCAA
CircID chrX:153509140|153509345
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MWAGAGCRPDRQKAVPAQGRRPEGVE
Nucleotide Sequence TTGTGGGCAGGGGCTGGGTGCAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAGGCAGAAGGCCAGAGGGTGTGGAGTGA
CircID chrX:153509140|153509345
ORF Type ORF4
Protein Length 65
Nucleotide Length 195
Protein Sequence MFPPSLRTWLRLSLSLHTLWPSALSWDCFLSVRPAPSPCPQNPRDSSLPSLPCSGLAPKPVLSRR
Nucleotide Sequence CTGTTCCCTCCATCTCTCCGAACCTGGCTTCGCCTGTCCCTTTCACTCCACACCCTCTGGCCTTCTGCCTTGAGCTGGGACTGCTTTCTGTCTGTCCGGCCTGCACCCAGCCCCTGCCCACAAAACCCCAGGGACAGCAGTCTCCCCAGCCTGCCCTGCTCAGGCCTTGCCCCCAAACCTGTACTGTCCCGGAGG
CircID chrX:153509140|153509345
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence LVACSLHLSEPGFACPFHSTPSGLLP
Nucleotide Sequence TTGGTGGCCTGTTCCCTCCATCTCTCCGAACCTGGCTTCGCCTGTCCCTTTCACTCCACACCCTCTGGCCTTCTGCCTTGA
CircID chrX:153509140|153509345
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MSGLHPAPAHKTPGTAVSPACPAQALPPNLYCPGG
Nucleotide Sequence CTGTCCGGCCTGCACCCAGCCCCTGCCCACAAAACCCCAGGGACAGCAGTCTCCCCAGCCTGCCCTGCTCAGGCCTTGCCCCCAAACCTGTACTGTCCCGGAGGA
CircID chrX:153509140|153509345
ORF Type ORF7
Protein Length 58
Nucleotide Length 174
Protein Sequence MASPVPFTPHPLAFCLELGLLSVCPACTQPLPTKPQGQQSPQPALLRPCPQTCTVPEE
Nucleotide Sequence CTGGCTTCGCCTGTCCCTTTCACTCCACACCCTCTGGCCTTCTGCCTTGAGCTGGGACTGCTTTCTGTCTGTCCGGCCTGCACCCAGCCCCTGCCCACAAAACCCCAGGGACAGCAGTCTCCCCAGCCTGCCCTGCTCAGGCCTTGCCCCCAAACCTGTACTGTCCCGGAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab