CircRNA Information

General Information
circRNA Basic Information
CircID chrX:153509360|153509504
Strand +
CircType exon
Host Gene ENSG00000182492.14;
Algorism CIRI2;
Sequence CTCAGAAGCAGCCCCTCCTTGCGCTGGACCAGAAGGATAAGGGGAGACCTAGCCACCAGTGGGCCAGTGGGGGTGAGGGGCTTCTAGGAAAACCGGTGTCTGGGACTCTGGCGGTTGATGGTGTCATCTGCGCGGGATGCTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:153509360|153509504 hsa-miR-384 0 1 1
chrX:153509360|153509504 hsa-miR-425-5p 0 0 1
chrX:153509360|153509504 hsa-miR-425-3p 0 0 1
chrX:153509360|153509504 hsa-miR-193b-5p 0 0 1
chrX:153509360|153509504 hsa-miR-193b-3p 0 0 1
chrX:153509360|153509504 hsa-miR-1237-5p 0 0 1
chrX:153509360|153509504 hsa-miR-1237-3p 0 0 1
chrX:153509360|153509504 hsa-miR-1248 0 0 1
chrX:153509360|153509504 hsa-miR-324-5p 0 0 1
chrX:153509360|153509504 hsa-miR-423-5p 0 0 1
chrX:153509360|153509504 hsa-miR-501-5p 0 0 1
chrX:153509360|153509504 hsa-miR-338-3p 0 0 1
chrX:153509360|153509504 hsa-miR-362-5p 0 0 1
chrX:153509360|153509504 hsa-miR-193a-3p 0 1 1
chrX:153509360|153509504 hsa-miR-661 1 0 0
chrX:153509360|153509504 hsa-miR-1539 1 0 0
chrX:153509360|153509504 hsa-miR-4456 0 1 0
chrX:153509360|153509504 hsa-miR-5787 1 0 0
chrX:153509360|153509504 hsa-miR-181c-3p 1 1 0
chrX:153509360|153509504 hsa-miR-6762-3p 0 1 0
chrX:153509360|153509504 hsa-miR-185-3p 1 0 0
chrX:153509360|153509504 hsa-miR-6868-3p 0 1 0
chrX:153509360|153509504 hsa-miR-6769a-3p 0 1 0
chrX:153509360|153509504 hsa-miR-7152-3p 0 1 0
chrX:153509360|153509504 hsa-miR-5571-3p 0 1 0
chrX:153509360|153509504 hsa-miR-3180-5p 1 0 0
chrX:153509360|153509504 hsa-miR-6886-3p 0 1 0
chrX:153509360|153509504 hsa-miR-5189-3p 1 0 0
chrX:153509360|153509504 hsa-miR-4749-3p 0 1 0
chrX:153509360|153509504 hsa-miR-6802-3p 0 1 0
chrX:153509360|153509504 hsa-miR-4433a-5p 1 0 0
chrX:153509360|153509504 hsa-miR-6754-5p 0 1 0
chrX:153509360|153509504 hsa-miR-6891-5p 0 1 0
chrX:153509360|153509504 hsa-miR-6784-3p 0 1 0
chrX:153509360|153509504 hsa-miR-6862-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:153509360|153509504
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MDQKDKGRPSHQWASGGEGLLGKPVSGTLAVDGVICAGCW
Nucleotide Sequence CTGGACCAGAAGGATAAGGGGAGACCTAGCCACCAGTGGGCCAGTGGGGGTGAGGGGCTTCTAGGAAAACCGGTGTCTGGGACTCTGGCGGTTGATGGTGTCATCTGCGCGGGATGCTGG

CircID chrX:153509360|153509504
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MTPSTARVPDTGFPRSPSPPLAHWWLGLPLSFWSSARRGCF
Nucleotide Sequence ATGACACCATCAACCGCCAGAGTCCCAGACACCGGTTTTCCTAGAAGCCCCTCACCCCCACTGGCCCACTGGTGGCTAGGTCTCCCCTTATCCTTCTGGTCCAGCGCAAGGAGGGGCTGCTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites