CircRNA Information

General Information
circRNA Basic Information
CircID chrX:153932316|153932577
Strand -
CircType exon
Host Gene ENSG00000089820.14;
Algorism CIRI2;
Sequence CTCTTCCTGACATGCAGGGAGACATATTTGGCATTGAAGTTCTCTATCATGGCTCGAGAGGCCTGGTCCATCAGTTTCTGAGCCAGACCGAGGCGCCGGTGGGAACGCTTCACAGCCAATGAGGTGATATGTCCATGGGGCACATCATCTGGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:153932316|153932577 hsa-miR-146a-5p 0 0 1
chrX:153932316|153932577 hsa-miR-146a-3p 0 0 1
chrX:153932316|153932577 hsa-miR-149-5p 0 0 1
chrX:153932316|153932577 hsa-miR-149-3p 0 0 1
chrX:153932316|153932577 hsa-miR-150-5p 0 0 1
chrX:153932316|153932577 hsa-miR-150-3p 0 0 1
chrX:153932316|153932577 hsa-miR-380-5p 0 0 1
chrX:153932316|153932577 hsa-miR-380-3p 0 0 1
chrX:153932316|153932577 hsa-miR-326 0 0 1
chrX:153932316|153932577 hsa-miR-484 0 0 1
chrX:153932316|153932577 hsa-miR-608 1 1 1
chrX:153932316|153932577 hsa-miR-647 0 0 1
chrX:153932316|153932577 hsa-miR-541-5p 0 0 1
chrX:153932316|153932577 hsa-miR-541-3p 0 0 1
chrX:153932316|153932577 hsa-miR-873-5p 0 0 1
chrX:153932316|153932577 hsa-miR-873-3p 0 0 1
chrX:153932316|153932577 hsa-miR-942-5p 0 0 1
chrX:153932316|153932577 hsa-miR-942-3p 0 0 1
chrX:153932316|153932577 hsa-miR-486-3p 1 1 1
chrX:153932316|153932577 hsa-miR-532-3p 0 0 1
chrX:153932316|153932577 hsa-miR-654-5p 0 0 1
chrX:153932316|153932577 hsa-miR-566 0 0 1
chrX:153932316|153932577 hsa-miR-1224-3p 0 0 1
chrX:153932316|153932577 hsa-miR-654-3p 0 0 1
chrX:153932316|153932577 hsa-miR-767-3p 0 0 1
chrX:153932316|153932577 hsa-miR-188-3p 0 0 1
chrX:153932316|153932577 hsa-miR-516a-5p 0 1 1
chrX:153932316|153932577 hsa-miR-455-5p 0 1 1
chrX:153932316|153932577 hsa-miR-330-5p 0 0 1
chrX:153932316|153932577 hsa-miR-146b-5p 0 0 1
chrX:153932316|153932577 hsa-miR-1260 0 0 1
chrX:153932316|153932577 hsa-miR-1280 0 0 1
chrX:153932316|153932577 hsa-miR-24 0 0 1
chrX:153932316|153932577 hsa-miR-938 1 0 0
chrX:153932316|153932577 hsa-miR-1260a 0 1 0
chrX:153932316|153932577 hsa-miR-1268a 1 0 0
chrX:153932316|153932577 hsa-miR-3155a 0 1 0
chrX:153932316|153932577 hsa-miR-1260b 0 1 0
chrX:153932316|153932577 hsa-miR-3196 1 0 0
chrX:153932316|153932577 hsa-miR-4259 0 1 0
chrX:153932316|153932577 hsa-miR-1268b 1 0 0
chrX:153932316|153932577 hsa-miR-4447 0 1 0
chrX:153932316|153932577 hsa-miR-3155b 0 1 0
chrX:153932316|153932577 hsa-miR-4651 0 1 0
chrX:153932316|153932577 hsa-miR-4688 1 0 0
chrX:153932316|153932577 hsa-miR-4741 1 0 0
chrX:153932316|153932577 hsa-miR-4666b 0 1 0
chrX:153932316|153932577 hsa-miR-6745 0 1 0
chrX:153932316|153932577 hsa-miR-7974 1 1 0
chrX:153932316|153932577 hsa-miR-500b-3p 0 1 0
chrX:153932316|153932577 hsa-miR-671-5p 1 0 0
chrX:153932316|153932577 hsa-miR-4755-3p 0 1 0
chrX:153932316|153932577 hsa-miR-3189-5p 0 1 0
chrX:153932316|153932577 hsa-miR-423-3p 1 0 0
chrX:153932316|153932577 hsa-miR-3180-3p 1 0 0
chrX:153932316|153932577 hsa-miR-6728-3p 1 1 0
chrX:153932316|153932577 hsa-miR-4713-5p 0 1 0
chrX:153932316|153932577 hsa-miR-4738-3p 0 1 0
chrX:153932316|153932577 hsa-miR-4787-5p 1 0 0
chrX:153932316|153932577 hsa-miR-4776-5p 0 1 0
chrX:153932316|153932577 hsa-miR-6870-3p 0 1 0
chrX:153932316|153932577 hsa-miR-4687-5p 1 1 0
chrX:153932316|153932577 hsa-miR-1911-3p 0 1 0
chrX:153932316|153932577 hsa-miR-6828-3p 0 1 0
chrX:153932316|153932577 hsa-miR-3614-3p 1 0 0
chrX:153932316|153932577 hsa-miR-668-5p 0 1 0
chrX:153932316|153932577 hsa-miR-6802-3p 0 1 0
chrX:153932316|153932577 hsa-miR-6779-3p 1 0 0
chrX:153932316|153932577 hsa-miR-4650-5p 0 1 0
chrX:153932316|153932577 hsa-miR-6816-5p 1 0 0
chrX:153932316|153932577 hsa-miR-6752-5p 1 1 0
chrX:153932316|153932577 hsa-miR-6756-5p 1 1 0
chrX:153932316|153932577 hsa-miR-6803-5p 1 1 0
chrX:153932316|153932577 hsa-miR-6751-5p 0 1 0
chrX:153932316|153932577 hsa-miR-3940-5p 1 0 0
chrX:153932316|153932577 hsa-miR-4472 0 1 0
chrX:153932316|153932577 hsa-miR-4757-5p 0 1 0
chrX:153932316|153932577 hsa-miR-6784-3p 1 1 0
chrX:153932316|153932577 hsa-miR-6862-3p 1 1 0
chrX:153932316|153932577 hsa-miR-6805-3p 1 0 0
chrX:153932316|153932577 hsa-miR-6744-3p 0 1 0
chrX:153932316|153932577 hsa-miR-1295b-5p 0 1 0
chrX:153932316|153932577 hsa-miR-6827-3p 0 1 0
chrX:153932316|153932577 hsa-miR-7153-5p 0 1 0
chrX:153932316|153932577 hsa-miR-130a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:153932316|153932577
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MQGDIFGIEVLYHGSRGLVHQFLSQTEAPVGTLHSQ
Nucleotide Sequence ATGCAGGGAGACATATTTGGCATTGAAGTTCTCTATCATGGCTCGAGAGGCCTGGTCCATCAGTTTCTGAGCCAGACCGAGGCGCCGGTGGGAACGCTTCACAGCCAATGA
CircID chrX:153932316|153932577
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK
Nucleotide Sequence TTGGCTGTGAAGCGTTCCCACCGGCGCCTCGGTCTGGCTCAGAAACTGATGGACCAGGCCTCTCGAGCCATGATAGAGAACTTCAATGCCAAATATGTCTCCCTGCATGTCAGGAAG
CircID chrX:153932316|153932577
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MQGDIFGIEVLYHGSRGLVHQFLSQTEAPVGTLHSLVGEEQRWGEGLGP
Nucleotide Sequence ATGCAGGGAGACATATTTGGCATTGAAGTTCTCTATCATGGCTCGAGAGGCCTGGTCCATCAGTTTCTGAGCCAGACCGAGGCGCCGGTGGGAACGCTTCACAGCCTGGTGGGAGAAGAGCAGAGATGGGGTGAGGGACTGGGACCTTGA
CircID chrX:153932316|153932577
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MPQLTPTSTPTREPGWTLHTNEVICPWGTSSG
Nucleotide Sequence CTGCCCCAACTAACCCCCACTTCCACCCCCACCAGAGAGCCTGGGTGGACCTTACATACCAATGAGGTGATATGTCCATGGGGCACATCATCTGGG
CircID chrX:153932316|153932577
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MVCKVHPGSLVGVEVGVSWGSPQGPSPSPHLCSSPTRL
Nucleotide Sequence TTGGTATGTAAGGTCCACCCAGGCTCTCTGGTGGGGGTGGAAGTGGGGGTTAGTTGGGGCAGCCCTCAAGGTCCCAGTCCCTCACCCCATCTCTGCTCTTCTCCCACCAGGCTGTGA
CircID chrX:153932316|153932577
ORF Type ORF4
Protein Length 85
Nucleotide Length 255
Protein Sequence MMCPMDISPHWYVRSTQALWWGWKWGLVGAALKVPVPHPISALLPPGCEAFPPAPRSGSETDGPGLSSHDRELQCQICLPACQEE
Nucleotide Sequence ATGATGTGCCCCATGGACATATCACCTCATTGGTATGTAAGGTCCACCCAGGCTCTCTGGTGGGGGTGGAAGTGGGGGTTAGTTGGGGCAGCCCTCAAGGTCCCAGTCCCTCACCCCATCTCTGCTCTTCTCCCACCAGGCTGTGAAGCGTTCCCACCGGCGCCTCGGTCTGGCTCAGAAACTGATGGACCAGGCCTCTCGAGCCATGATAGAGAACTTCAATGCCAAATATGTCTCCCTGCATGTCAGGAAGAG
CircID chrX:153932316|153932577
ORF Type ORF5
Protein Length 57
Nucleotide Length 171
Protein Sequence MGQPSRSQSLTPSLLFSHQAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK
Nucleotide Sequence TTGGGGCAGCCCTCAAGGTCCCAGTCCCTCACCCCATCTCTGCTCTTCTCCCACCAGGCTGTGAAGCGTTCCCACCGGCGCCTCGGTCTGGCTCAGAAACTGATGGACCAGGCCTCTCGAGCCATGATAGAGAACTTCAATGCCAAATATGTCTCCCTGCATGTCAGGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab