CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154026789|154026967
Strand -
CircType exon
Host Gene ENSG00000169057.18;
Algorism CIRI2;
Sequence CAAGTATCTCCAGCTCACTGAGCTGTCAAGACCGGCAATCCCACTGGCTATGACAAGCCCACCAGCAGGCAGGGCCGGGAGGGGTAGACCTGGGGGGAGCTCGACGACATACAGTATTGTCAGGAGAGGAGGTAGTAACTAACAACTGGAACAAGGGTGGGGGAGACTGTGGATGTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154026789|154026967 hsa-miR-200b-5p 0 0 1
chrX:154026789|154026967 hsa-miR-200b-3p 0 0 1
chrX:154026789|154026967 hsa-miR-200c-5p 0 0 1
chrX:154026789|154026967 hsa-miR-200c-3p 0 0 1
chrX:154026789|154026967 hsa-miR-370-5p 0 0 1
chrX:154026789|154026967 hsa-miR-370-3p 0 0 1
chrX:154026789|154026967 hsa-miR-429 0 0 1
chrX:154026789|154026967 hsa-miR-558 0 0 1
chrX:154026789|154026967 hsa-miR-567 0 0 1
chrX:154026789|154026967 hsa-miR-575 0 0 1
chrX:154026789|154026967 hsa-miR-620 0 0 1
chrX:154026789|154026967 hsa-miR-541-5p 0 0 1
chrX:154026789|154026967 hsa-miR-541-3p 0 0 1
chrX:154026789|154026967 hsa-miR-297 0 0 1
chrX:154026789|154026967 hsa-miR-1183 0 0 1
chrX:154026789|154026967 hsa-miR-1291 0 1 1
chrX:154026789|154026967 hsa-miR-1270 0 0 1
chrX:154026789|154026967 hsa-miR-145-5p 0 0 1
chrX:154026789|154026967 hsa-miR-654-5p 0 0 1
chrX:154026789|154026967 hsa-miR-361-3p 0 1 1
chrX:154026789|154026967 hsa-miR-138 0 0 1
chrX:154026789|154026967 hsa-miR-346 1 0 0
chrX:154026789|154026967 hsa-miR-638 1 0 0
chrX:154026789|154026967 hsa-miR-1281 1 0 0
chrX:154026789|154026967 hsa-miR-1913 1 1 0
chrX:154026789|154026967 hsa-miR-3174 0 1 0
chrX:154026789|154026967 hsa-miR-5193 1 1 0
chrX:154026789|154026967 hsa-miR-6749-3p 1 1 0
chrX:154026789|154026967 hsa-miR-4726-3p 1 1 0
chrX:154026789|154026967 hsa-miR-6836-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6881-3p 1 0 0
chrX:154026789|154026967 hsa-miR-150-5p 1 0 0
chrX:154026789|154026967 hsa-miR-6854-5p 0 1 0
chrX:154026789|154026967 hsa-miR-3692-5p 0 1 0
chrX:154026789|154026967 hsa-miR-7110-3p 1 0 0
chrX:154026789|154026967 hsa-miR-1915-5p 1 0 0
chrX:154026789|154026967 hsa-miR-6845-3p 1 0 0
chrX:154026789|154026967 hsa-miR-877-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6765-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6728-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6882-3p 1 0 0
chrX:154026789|154026967 hsa-miR-4713-5p 1 0 0
chrX:154026789|154026967 hsa-miR-6772-3p 1 0 0
chrX:154026789|154026967 hsa-miR-4763-5p 1 0 0
chrX:154026789|154026967 hsa-miR-6763-3p 1 0 0
chrX:154026789|154026967 hsa-miR-3944-3p 1 0 0
chrX:154026789|154026967 hsa-miR-7111-3p 1 0 0
chrX:154026789|154026967 hsa-miR-194-3p 0 1 0
chrX:154026789|154026967 hsa-miR-1236-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6730-3p 1 0 0
chrX:154026789|154026967 hsa-miR-4732-3p 1 0 0
chrX:154026789|154026967 hsa-miR-3180-5p 1 0 0
chrX:154026789|154026967 hsa-miR-4758-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6887-3p 1 1 0
chrX:154026789|154026967 hsa-miR-1224-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6895-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6865-3p 1 0 0
chrX:154026789|154026967 hsa-miR-449c-3p 1 0 0
chrX:154026789|154026967 hsa-miR-4433a-5p 1 0 0
chrX:154026789|154026967 hsa-miR-3173-5p 0 1 0
chrX:154026789|154026967 hsa-miR-4433b-5p 1 0 0
chrX:154026789|154026967 hsa-miR-6780b-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6800-3p 1 1 0
chrX:154026789|154026967 hsa-miR-3162-3p 1 0 0
chrX:154026789|154026967 hsa-miR-3127-3p 1 1 0
chrX:154026789|154026967 hsa-miR-320a-5p 1 0 0
chrX:154026789|154026967 hsa-miR-4758-5p 1 0 0
chrX:154026789|154026967 hsa-miR-10396a-3p 1 0 0
chrX:154026789|154026967 hsa-miR-10396b-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6799-3p 0 1 0
chrX:154026789|154026967 hsa-miR-6756-3p 1 1 0
chrX:154026789|154026967 hsa-miR-6784-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6792-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6862-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6829-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6775-3p 0 1 0
chrX:154026789|154026967 hsa-miR-3059-5p 1 0 0
chrX:154026789|154026967 hsa-miR-4723-3p 1 0 0
chrX:154026789|154026967 hsa-miR-6769b-3p 1 0 0
chrX:154026789|154026967 hsa-miR-4676-5p 0 1 0
chrX:154026789|154026967 hsa-miR-6827-3p 1 0 0
chrX:154026789|154026967 hsa-miR-3681-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:154026789|154026967
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MSRPAIPLAMTSPPAGRAGRGRPGGSSTTYSIVRRGGSN
Nucleotide Sequence CTGTCAAGACCGGCAATCCCACTGGCTATGACAAGCCCACCAGCAGGCAGGGCCGGGAGGGGTAGACCTGGGGGGAGCTCGACGACATACAGTATTGTCAGGAGAGGAGGTAGTAACTAA
CircID chrX:154026789|154026967
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MGGARRHTVLSGEEVVTNNWNKGGGDCGCG
Nucleotide Sequence CTGGGGGGAGCTCGACGACATACAGTATTGTCAGGAGAGGAGGTAGTAACTAACAACTGGAACAAGGGTGGGGGAGACTGTGGATGTGGC
CircID chrX:154026789|154026967
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MFQLLVTTSSPDNTVCRRAPPRSTPPGPACWWACHSQWDCRS
Nucleotide Sequence TTGTTCCAGTTGTTAGTTACTACCTCCTCTCCTGACAATACTGTATGTCGTCGAGCTCCCCCCAGGTCTACCCCTCCCGGCCCTGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTGCCGGTCTTGA
CircID chrX:154026789|154026967
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MTILYVVELPPGLPLPALPAGGLVIASGIAGLDSSVSWRYL
Nucleotide Sequence CTGACAATACTGTATGTCGTCGAGCTCCCCCCAGGTCTACCCCTCCCGGCCCTGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATACTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab